RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
SRRM1-219ENST00000495561 ZPR1O75312 459 aa12.02□□□□□ -0.49
SRRM1-219ENST00000495561 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
SRRM1-219ENST00000495561 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
SRRM1-219ENST00000495561 Q6ZNB5 142 aa12.01□□□□□ -0.49
SRRM1-219ENST00000495561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
SRRM1-219ENST00000495561 HIC1Q14526 733 aa11.99□□□□□ -0.49
SRRM1-219ENST00000495561 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
SRRM1-219ENST00000495561 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-219ENST00000495561 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
SRRM1-219ENST00000495561 OATP04181 439 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 CFHP08603 1231 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 SLC10A3P09131 477 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 GGCXP38435 758 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
SRRM1-219ENST00000495561 GFRA3O60609 400 aa11.96□□□□□ -0.49
SRRM1-219ENST00000495561 KMT5BQ4FZB7 885 aa11.96□□□□□ -0.49
SRRM1-219ENST00000495561 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-219ENST00000495561 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
SRRM1-219ENST00000495561 GPR37O15354 613 aa11.94□□□□□ -0.5
SRRM1-219ENST00000495561 TLL1O43897 1013 aa11.94□□□□□ -0.5
SRRM1-219ENST00000495561 FECHP22830 423 aa11.94□□□□□ -0.5
SRRM1-219ENST00000495561 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
SRRM1-219ENST00000495561 GNPATO15228 680 aa11.92□□□□□ -0.5
SRRM1-219ENST00000495561 KDM2AQ9Y2K7 1162 aa11.9□□□□□ -0.5
SRRM1-219ENST00000495561 RNF223E7ERA6 249 aa11.89□□□□□ -0.51
SRRM1-219ENST00000495561 LCE2BO14633 110 aa11.89□□□□□ -0.51
SRRM1-219ENST00000495561 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
SRRM1-219ENST00000495561 NR1I2O75469 434 aa11.85□□□□□ -0.51
SRRM1-219ENST00000495561 S1PR4O95977 384 aa11.85□□□□□ -0.51
SRRM1-219ENST00000495561 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
SRRM1-219ENST00000495561 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-219ENST00000495561 ADH1BP00325 375 aa11.84□□□□□ -0.51
SRRM1-219ENST00000495561 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
SRRM1-219ENST00000495561 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
SRRM1-219ENST00000495561 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-219ENST00000495561 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.52
SRRM1-219ENST00000495561 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
SRRM1-219ENST00000495561 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-219ENST00000495561 SLC19A1P41440 591 aa11.82□□□□□ -0.52
SRRM1-219ENST00000495561 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
SRRM1-219ENST00000495561 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
SRRM1-219ENST00000495561 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
SRRM1-219ENST00000495561 PHOX2BQ99453 314 aa11.81□□□□□ -0.52
SRRM1-219ENST00000495561 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
SRRM1-219ENST00000495561 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
SRRM1-219ENST00000495561 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
SRRM1-219ENST00000495561 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
SRRM1-219ENST00000495561 TRIM67Q6ZTA4 783 aa11.77□□□□□ -0.53
SRRM1-219ENST00000495561 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
SRRM1-219ENST00000495561 FUT2Q10981 343 aa11.75□□□□□ -0.53
SRRM1-219ENST00000495561 SPSB2Q99619 263 aa11.75□□□□□ -0.53
SRRM1-219ENST00000495561 MORN1Q5T089 497 aa11.74□□□□□ -0.53
SRRM1-219ENST00000495561 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
SRRM1-219ENST00000495561 GCGRP47871 477 aa11.73□□□□□ -0.53
SRRM1-219ENST00000495561 PLA2G2CQ5R387 149 aa11.73□□□□□ -0.53
SRRM1-219ENST00000495561 SULF1Q8IWU6 871 aa11.73□□□□□ -0.53
SRRM1-219ENST00000495561 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
SRRM1-219ENST00000495561 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
SRRM1-219ENST00000495561 ZNF697Q5TEC3 545 aa11.7□□□□□ -0.54
SRRM1-219ENST00000495561 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
SRRM1-219ENST00000495561 SLC27A5Q9Y2P5 690 aa11.69□□□□□ -0.54
SRRM1-219ENST00000495561 PRR20EP86478 221 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 PRR20CP86479 221 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 PRR20DP86480 221 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 PRR20BP86481 221 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 PRR20AP86496 221 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 MAP2K5Q13163 448 aa11.68□□□□□ -0.54
SRRM1-219ENST00000495561 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
SRRM1-219ENST00000495561 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
SRRM1-219ENST00000495561 GDF9O60383 454 aa11.65□□□□□ -0.54
SRRM1-219ENST00000495561 FMNL1O95466 1100 aaPredicted RBP11.65□□□□□ -0.54
SRRM1-219ENST00000495561 TNFRSF10AO00220 468 aa11.64□□□□□ -0.55
SRRM1-219ENST00000495561 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
SRRM1-219ENST00000495561 IRF6O14896 467 aa11.63□□□□□ -0.55
SRRM1-219ENST00000495561 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
SRRM1-219ENST00000495561 CD46P15529 392 aa11.62□□□□□ -0.55
SRRM1-219ENST00000495561 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
SRRM1-219ENST00000495561 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
SRRM1-219ENST00000495561 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
SRRM1-219ENST00000495561 DGAT1O75907 488 aa11.61□□□□□ -0.55
SRRM1-219ENST00000495561 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
SRRM1-219ENST00000495561 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
SRRM1-219ENST00000495561 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
SRRM1-219ENST00000495561 RPIAP49247 311 aa11.59□□□□□ -0.55
SRRM1-219ENST00000495561 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
SRRM1-219ENST00000495561 MYT1Q01538 1121 aa11.59□□□□□ -0.55
SRRM1-219ENST00000495561 ZNF787Q6DD87 383 aa11.59□□□□□ -0.55
SRRM1-219ENST00000495561 PKD2L1Q9P0L9 805 aa11.59□□□□□ -0.55
SRRM1-219ENST00000495561 FAM187AA6NFU0 413 aa11.58□□□□□ -0.56
SRRM1-219ENST00000495561 MSS51Q4VC12 460 aa11.58□□□□□ -0.56
SRRM1-219ENST00000495561 FOXC1Q12948 553 aa11.57□□□□□ -0.56
SRRM1-219ENST00000495561 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
SRRM1-219ENST00000495561 KDM4AO75164 1064 aa11.55□□□□□ -0.56
SRRM1-219ENST00000495561 Q3C1V9 767 aa11.55□□□□□ -0.56
SRRM1-219ENST00000495561 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
SRRM1-219ENST00000495561 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
SRRM1-219ENST00000495561 HLA-CQ95604 372 aa11.52□□□□□ -0.57
SRRM1-219ENST00000495561 USP46P62068 366 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms