RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.26
BRD9-212ENST00000495265 SEC24BO95487 1268 aa22.89■■□□□ 1.26
BRD9-212ENST00000495265 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.25
BRD9-212ENST00000495265 AMER1Q5JTC6 1135 aaPredicted RBP22.89■■□□□ 1.25
BRD9-212ENST00000495265 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
BRD9-212ENST00000495265 TRMT2AQ8IZ69 625 aaKnown RBP22.88■■□□□ 1.25
BRD9-212ENST00000495265 SHROOM2Q13796 1616 aa22.88■■□□□ 1.25
BRD9-212ENST00000495265 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
BRD9-212ENST00000495265 ABCA8O94911 1581 aa22.87■■□□□ 1.25
BRD9-212ENST00000495265 CCDC141Q6ZP82 1450 aa22.86■■□□□ 1.25
BRD9-212ENST00000495265 EIF2AK4Q9P2K8 1649 aaKnown RBP22.85■■□□□ 1.25
BRD9-212ENST00000495265 RSPH6AQ9H0K4 717 aa22.85■■□□□ 1.25
BRD9-212ENST00000495265 APAF1O14727 1248 aa22.85■■□□□ 1.25
BRD9-212ENST00000495265 SLKQ9H2G2 1235 aaPredicted RBP22.85■■□□□ 1.25
BRD9-212ENST00000495265 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
BRD9-212ENST00000495265 NKTRP30414 1462 aaKnown RBP22.83■■□□□ 1.25
BRD9-212ENST00000495265 SAMD9LQ8IVG5 1584 aa22.82■■□□□ 1.24
BRD9-212ENST00000495265 VIRMAQ69YN4 1812 aaKnown RBP22.82■■□□□ 1.24
BRD9-212ENST00000495265 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
BRD9-212ENST00000495265 UNC13BO14795 1591 aa22.79■■□□□ 1.24
BRD9-212ENST00000495265 BECN1Q14457 450 aa22.78■■□□□ 1.24
BRD9-212ENST00000495265 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
BRD9-212ENST00000495265 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
BRD9-212ENST00000495265 RNF17Q9BXT8 1623 aaKnown RBP22.77■■□□□ 1.24
BRD9-212ENST00000495265 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
BRD9-212ENST00000495265 COG6Q9Y2V7 657 aa22.77■■□□□ 1.23
BRD9-212ENST00000495265 ASXL1Q8IXJ9 1541 aa22.76■■□□□ 1.23
BRD9-212ENST00000495265 E9PSI1 815 aa22.76■■□□□ 1.23
BRD9-212ENST00000495265 NLRP1Q9C000 1473 aa22.76■■□□□ 1.23
BRD9-212ENST00000495265 CLUAP1Q96AJ1 413 aa22.76■■□□□ 1.23
BRD9-212ENST00000495265 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
BRD9-212ENST00000495265 CGNL1Q0VF96 1302 aa22.75■■□□□ 1.23
BRD9-212ENST00000495265 MAPK8IP3Q9UPT6 1336 aa22.75■■□□□ 1.23
BRD9-212ENST00000495265 ANTXR1Q9H6X2 564 aa22.74■■□□□ 1.23
BRD9-212ENST00000495265 RSPH4AQ5TD94 716 aa22.73■■□□□ 1.23
BRD9-212ENST00000495265 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
BRD9-212ENST00000495265 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
BRD9-212ENST00000495265 IQGAP3Q86VI3 1631 aa22.72■■□□□ 1.23
BRD9-212ENST00000495265 CANXP27824 592 aaKnown RBP22.72■■□□□ 1.23
BRD9-212ENST00000495265 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
BRD9-212ENST00000495265 ARXQ96QS3 562 aa22.72■■□□□ 1.23
BRD9-212ENST00000495265 SYNMO15061 1565 aa22.72■■□□□ 1.23
BRD9-212ENST00000495265 CENPJQ9HC77 1338 aaPredicted RBP22.71■■□□□ 1.23
BRD9-212ENST00000495265 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
BRD9-212ENST00000495265 L1TD1Q5T7N2 865 aaKnown RBP22.7■■□□□ 1.22
BRD9-212ENST00000495265 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
BRD9-212ENST00000495265 IQGAP1P46940 1657 aa22.68■■□□□ 1.22
BRD9-212ENST00000495265 ATP10AO60312 1499 aa22.68■■□□□ 1.22
BRD9-212ENST00000495265 TBC1D2Q9BYX2 928 aa22.67■■□□□ 1.22
BRD9-212ENST00000495265 MADDQ8WXG6 1647 aa22.66■■□□□ 1.22
BRD9-212ENST00000495265 NPC1L1Q9UHC9 1359 aa22.65■■□□□ 1.22
BRD9-212ENST00000495265 MYOM1P52179 1685 aa22.65■■□□□ 1.22
BRD9-212ENST00000495265 TBC1D32Q96NH3 1257 aa22.65■■□□□ 1.22
BRD9-212ENST00000495265 SPRYD3Q8NCJ5 442 aa22.65■■□□□ 1.22
BRD9-212ENST00000495265 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.21
BRD9-212ENST00000495265 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.21
BRD9-212ENST00000495265 WWC1Q8IX03 1113 aa22.63■■□□□ 1.21
BRD9-212ENST00000495265 TNNQ9UQP3 1299 aa22.63■■□□□ 1.21
BRD9-212ENST00000495265 PCDHB15Q9Y5E8 787 aa22.63■■□□□ 1.21
BRD9-212ENST00000495265 SCAF11Q99590 1463 aaKnown RBP22.63■■□□□ 1.21
BRD9-212ENST00000495265 XRCC6P12956 609 aaKnown RBP eCLIP22.63■■□□□ 1.21
BRD9-212ENST00000495265 UPF2Q9HAU5 1272 aaKnown RBP22.63■■□□□ 1.21
BRD9-212ENST00000495265 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
BRD9-212ENST00000495265 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
BRD9-212ENST00000495265 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
BRD9-212ENST00000495265 RLBP1P12271 317 aa22.61■■□□□ 1.21
BRD9-212ENST00000495265 GZF1Q9H116 711 aaPredicted RBP22.61■■□□□ 1.21
BRD9-212ENST00000495265 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
BRD9-212ENST00000495265 PMFBP1Q8TBY8 1022 aa22.59■■□□□ 1.21
BRD9-212ENST00000495265 PANK2Q9BZ23 570 aa22.59■■□□□ 1.21
BRD9-212ENST00000495265 GOLGA6L3A6NEY3 463 aa22.59■■□□□ 1.21
BRD9-212ENST00000495265 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
BRD9-212ENST00000495265 CARD14Q9BXL6 1004 aa22.58■■□□□ 1.21
BRD9-212ENST00000495265 RARSP54136 660 aaKnown RBP22.58■■□□□ 1.2
BRD9-212ENST00000495265 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.2
BRD9-212ENST00000495265 BCL2L13Q9BXK5 485 aa22.57■■□□□ 1.2
BRD9-212ENST00000495265 TTC37Q6PGP7 1564 aa22.57■■□□□ 1.2
BRD9-212ENST00000495265 FSD2A1L4K1 749 aa22.57■■□□□ 1.2
BRD9-212ENST00000495265 NGEFQ8N5V2 710 aa22.57■■□□□ 1.2
BRD9-212ENST00000495265 MCM4P33991 863 aa22.56■■□□□ 1.2
BRD9-212ENST00000495265 DUOX2Q9NRD8 1548 aa22.56■■□□□ 1.2
BRD9-212ENST00000495265 SCAPERQ9BY12 1400 aa22.55■■□□□ 1.2
BRD9-212ENST00000495265 KDM5AP29375 1690 aaKnown RBP22.53■■□□□ 1.2
BRD9-212ENST00000495265 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
BRD9-212ENST00000495265 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
BRD9-212ENST00000495265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.192e-9■■■□□ 19.1
BRD9-212ENST00000495265 CEP152O94986 1710 aa22.5■■□□□ 1.19
BRD9-212ENST00000495265 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
BRD9-212ENST00000495265 PNNQ9H307 717 aaKnown RBP22.49■■□□□ 1.19
BRD9-212ENST00000495265 RWDD1Q9H446 243 aaPredicted RBP22.49■■□□□ 1.19
BRD9-212ENST00000495265 TRAK2O60296 914 aa22.49■■□□□ 1.19
BRD9-212ENST00000495265 POLR3AO14802 1390 aaPredicted RBP22.48■■□□□ 1.19
BRD9-212ENST00000495265 TNNT2P45379 298 aaPredicted RBP22.48■■□□□ 1.19
BRD9-212ENST00000495265 ERVK-7P63135 1459 aa22.48■■□□□ 1.19
BRD9-212ENST00000495265 AAMPQ13685 434 aa22.48■■□□□ 1.19
BRD9-212ENST00000495265 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
BRD9-212ENST00000495265 CLCN1P35523 988 aa22.47■■□□□ 1.19
BRD9-212ENST00000495265 MFAP1P55081 439 aaKnown RBP22.47■■□□□ 1.19
BRD9-212ENST00000495265 CHMP5Q9NZZ3 219 aa22.47■■□□□ 1.19
BRD9-212ENST00000495265 C22orf23Q9BZE7 217 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms