RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
GARNL3-219ENST00000495172 UBTFP17480 764 aaKnown RBP14.89□□□□□ -0.03
GARNL3-219ENST00000495172 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
GARNL3-219ENST00000495172 BRINP3Q76B58 766 aa14.88□□□□□ -0.03
GARNL3-219ENST00000495172 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
GARNL3-219ENST00000495172 NGLY1Q96IV0 654 aa14.88□□□□□ -0.03
GARNL3-219ENST00000495172 CASKIN1Q8WXD9 1431 aa14.86□□□□□ -0.03
GARNL3-219ENST00000495172 MROH1Q8NDA8 1641 aa14.86□□□□□ -0.03
GARNL3-219ENST00000495172 BCANQ96GW7 911 aa14.86□□□□□ -0.03
GARNL3-219ENST00000495172 CHD2O14647 1828 aaKnown RBP14.85□□□□□ -0.03
GARNL3-219ENST00000495172 HRCP23327 699 aa14.84□□□□□ -0.03
GARNL3-219ENST00000495172 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
GARNL3-219ENST00000495172 USP21Q9UK80 565 aa14.83□□□□□ -0.04
GARNL3-219ENST00000495172 PNPLA6Q8IY17 1366 aa14.82□□□□□ -0.04
GARNL3-219ENST00000495172 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
GARNL3-219ENST00000495172 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
GARNL3-219ENST00000495172 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
GARNL3-219ENST00000495172 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
GARNL3-219ENST00000495172 EFCAB6Q5THR3 1501 aa14.8□□□□□ -0.04
GARNL3-219ENST00000495172 ASXL1Q8IXJ9 1541 aa14.8□□□□□ -0.04
GARNL3-219ENST00000495172 ATF3P18847 181 aa14.79□□□□□ -0.04
GARNL3-219ENST00000495172 CAMSAP2Q08AD1 1489 aa14.79□□□□□ -0.04
GARNL3-219ENST00000495172 BCL9LQ86UU0 1499 aa14.79□□□□□ -0.04
GARNL3-219ENST00000495172 ATRNO75882 1429 aa14.78□□□□□ -0.04
GARNL3-219ENST00000495172 TRPC5Q9UL62 973 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-219ENST00000495172 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
GARNL3-219ENST00000495172 IDI1Q13907 227 aa14.77□□□□□ -0.05
GARNL3-219ENST00000495172 CADPS2Q86UW7 1296 aa14.77□□□□□ -0.05
GARNL3-219ENST00000495172 BLMP54132 1417 aaPredicted RBP14.76□□□□□ -0.05
GARNL3-219ENST00000495172 EEA1Q15075 1411 aa14.76□□□□□ -0.05
GARNL3-219ENST00000495172 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
GARNL3-219ENST00000495172 C19orf44Q9H6X5 657 aa14.75□□□□□ -0.05
GARNL3-219ENST00000495172 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
GARNL3-219ENST00000495172 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
GARNL3-219ENST00000495172 MSH5O43196 834 aa14.73□□□□□ -0.05
GARNL3-219ENST00000495172 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
GARNL3-219ENST00000495172 MYO5BQ9ULV0 1848 aa14.71□□□□□ -0.05
GARNL3-219ENST00000495172 R3HDM1Q15032 1099 aaKnown RBP14.71□□□□□ -0.05
GARNL3-219ENST00000495172 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.06
GARNL3-219ENST00000495172 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
GARNL3-219ENST00000495172 MST1RQ04912 1400 aa14.69□□□□□ -0.06
GARNL3-219ENST00000495172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
GARNL3-219ENST00000495172 UTRNP46939 3433 aa14.68□□□□□ -0.06
GARNL3-219ENST00000495172 NCOA3Q9Y6Q9 1424 aa14.67□□□□□ -0.06
GARNL3-219ENST00000495172 ADGRB3O60242 1522 aa14.67□□□□□ -0.06
GARNL3-219ENST00000495172 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
GARNL3-219ENST00000495172 ARHGAP31Q2M1Z3 1444 aa14.66□□□□□ -0.06
GARNL3-219ENST00000495172 GLI3P10071 1580 aa14.66□□□□□ -0.06
GARNL3-219ENST00000495172 SF3B2Q13435 895 aaKnown RBP14.66□□□□□ -0.06
GARNL3-219ENST00000495172 GJD4Q96KN9 370 aaPredicted RBP14.66□□□□□ -0.06
GARNL3-219ENST00000495172 PLEKHG1Q9ULL1 1385 aa14.65□□□□□ -0.06
GARNL3-219ENST00000495172 PTPRUQ92729 1446 aa14.65□□□□□ -0.06
GARNL3-219ENST00000495172 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
GARNL3-219ENST00000495172 ZFYVE9O95405 1425 aa14.64□□□□□ -0.07
GARNL3-219ENST00000495172 CAMTA1Q9Y6Y1 1673 aa14.64□□□□□ -0.07
GARNL3-219ENST00000495172 TSPY4P0CV99 314 aa14.63□□□□□ -0.07
GARNL3-219ENST00000495172 TSPY10P0CW01 314 aa14.63□□□□□ -0.07
GARNL3-219ENST00000495172 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
GARNL3-219ENST00000495172 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
GARNL3-219ENST00000495172 EN1Q05925 392 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-219ENST00000495172 ARHGEF5Q12774 1597 aa14.62□□□□□ -0.07
GARNL3-219ENST00000495172 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
GARNL3-219ENST00000495172 RIMS2Q9UQ26 1411 aa14.62□□□□□ -0.07
GARNL3-219ENST00000495172 RALGAPBQ86X10 1494 aa14.62□□□□□ -0.07
GARNL3-219ENST00000495172 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
GARNL3-219ENST00000495172 UNC13BO14795 1591 aa14.6□□□□□ -0.07
GARNL3-219ENST00000495172 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
GARNL3-219ENST00000495172 PTCH1Q13635 1447 aa14.59□□□□□ -0.07
GARNL3-219ENST00000495172 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.07
GARNL3-219ENST00000495172 SEPT12Q8IYM1 358 aa14.58□□□□□ -0.08
GARNL3-219ENST00000495172 TRPM2O94759 1503 aa14.57□□□□□ -0.08
GARNL3-219ENST00000495172 C1QTNF8P60827 252 aa14.57□□□□□ -0.08
GARNL3-219ENST00000495172 MARF1Q9Y4F3 1742 aaKnown RBP14.57□□□□□ -0.08
GARNL3-219ENST00000495172 EHBP1L1Q8N3D4 1523 aa14.56□□□□□ -0.08
GARNL3-219ENST00000495172 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
GARNL3-219ENST00000495172 ORAI2Q96SN7 254 aa14.56□□□□□ -0.08
GARNL3-219ENST00000495172 DCCP43146 1447 aa14.56□□□□□ -0.08
GARNL3-219ENST00000495172 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
GARNL3-219ENST00000495172 BAG6P46379 1132 aa14.55□□□□□ -0.08
GARNL3-219ENST00000495172 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
GARNL3-219ENST00000495172 NOS1P29475 1434 aa14.55□□□□□ -0.08
GARNL3-219ENST00000495172 MYOM2P54296 1465 aa14.54□□□□□ -0.08
GARNL3-219ENST00000495172 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
GARNL3-219ENST00000495172 NALCNQ8IZF0 1738 aa14.54□□□□□ -0.08
GARNL3-219ENST00000495172 COL22A1Q8NFW1 1626 aaPredicted RBP14.53□□□□□ -0.08
GARNL3-219ENST00000495172 DUOX2Q9NRD8 1548 aa14.53□□□□□ -0.08
GARNL3-219ENST00000495172 SOS2Q07890 1332 aaPredicted RBP14.53□□□□□ -0.08
GARNL3-219ENST00000495172 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.09
GARNL3-219ENST00000495172 C1orf167Q5SNV9 1468 aa14.51□□□□□ -0.09
GARNL3-219ENST00000495172 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
GARNL3-219ENST00000495172 XPCQ01831 940 aaPredicted RBP14.51□□□□□ -0.09
GARNL3-219ENST00000495172 EZH2Q15910 746 aaKnown RBP14.51□□□□□ -0.09
GARNL3-219ENST00000495172 KRT27Q7Z3Y8 459 aa14.51□□□□□ -0.09
GARNL3-219ENST00000495172 RRP7BPQ9NSQ0 103 aa14.51□□□□□ -0.09
GARNL3-219ENST00000495172 XRN1Q8IZH2 1706 aaKnown RBP14.51□□□□□ -0.09
GARNL3-219ENST00000495172 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.51□□□□□ -0.09
GARNL3-219ENST00000495172 UNC5CLQ8IV45 518 aa14.5□□□□□ -0.09
GARNL3-219ENST00000495172 LAMC1P11047 1609 aa14.5□□□□□ -0.09
GARNL3-219ENST00000495172 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
GARNL3-219ENST00000495172 KIF15Q9NS87 1388 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms