RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 GIGYF2Q6Y7W6 1299 aaKnown RBP10.71□□□□□ -0.69
SRRM1-218ENST00000494934 MS4A1P11836 297 aa10.7□□□□□ -0.7
SRRM1-218ENST00000494934 LAPTM4BQ86VI4 370 aa10.7□□□□□ -0.7
SRRM1-218ENST00000494934 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
SRRM1-218ENST00000494934 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
SRRM1-218ENST00000494934 CLCN1P35523 988 aa10.68□□□□□ -0.7
SRRM1-218ENST00000494934 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
SRRM1-218ENST00000494934 ZFRQ96KR1 1074 aaKnown RBP10.68□□□□□ -0.7
SRRM1-218ENST00000494934 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
SRRM1-218ENST00000494934 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
SRRM1-218ENST00000494934 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
SRRM1-218ENST00000494934 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-218ENST00000494934 MRPL50Q8N5N7 158 aaKnown RBP10.67□□□□□ -0.7
SRRM1-218ENST00000494934 SAMD7Q7Z3H4 446 aa10.65□□□□□ -0.7
SRRM1-218ENST00000494934 SSTR3P32745 418 aaPredicted RBP10.64□□□□□ -0.71
SRRM1-218ENST00000494934 ARXQ96QS3 562 aa10.64□□□□□ -0.71
SRRM1-218ENST00000494934 SLC10A3P09131 477 aa10.63□□□□□ -0.71
SRRM1-218ENST00000494934 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
SRRM1-218ENST00000494934 CD46P15529 392 aa10.61□□□□□ -0.71
SRRM1-218ENST00000494934 PCDH10Q9P2E7 1040 aa10.6□□□□□ -0.71
SRRM1-218ENST00000494934 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
SRRM1-218ENST00000494934 SOWAHBA6NEL2 793 aa10.57□□□□□ -0.72
SRRM1-218ENST00000494934 BCAMP50895 628 aa10.57□□□□□ -0.72
SRRM1-218ENST00000494934 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
SRRM1-218ENST00000494934 WNT2BQ93097 391 aa10.56□□□□□ -0.72
SRRM1-218ENST00000494934 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
SRRM1-218ENST00000494934 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
SRRM1-218ENST00000494934 SULF1Q8IWU6 871 aa10.54□□□□□ -0.72
SRRM1-218ENST00000494934 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
SRRM1-218ENST00000494934 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
SRRM1-218ENST00000494934 GCGRP47871 477 aa10.53□□□□□ -0.72
SRRM1-218ENST00000494934 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
SRRM1-218ENST00000494934 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
SRRM1-218ENST00000494934 STAC3Q96MF2 364 aa10.53□□□□□ -0.72
SRRM1-218ENST00000494934 ZMYND15Q9H091 742 aa10.52□□□□□ -0.73
SRRM1-218ENST00000494934 GOLGA8CPA6NN73 597 aa10.51□□□□□ -0.73
SRRM1-218ENST00000494934 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
SRRM1-218ENST00000494934 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
SRRM1-218ENST00000494934 KCTD12Q96CX2 325 aaKnown RBP10.51□□□□□ -0.73
SRRM1-218ENST00000494934 HDGFP51858 240 aaKnown RBP10.5□□□□□ -0.73
SRRM1-218ENST00000494934 HOMEZQ8IX15 550 aa10.5□□□□□ -0.73
SRRM1-218ENST00000494934 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
SRRM1-218ENST00000494934 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
SRRM1-218ENST00000494934 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
SRRM1-218ENST00000494934 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
SRRM1-218ENST00000494934 TSR3Q9UJK0 312 aaKnown RBP10.49□□□□□ -0.73
SRRM1-218ENST00000494934 RNF40O75150 1001 aa10.48□□□□□ -0.73
SRRM1-218ENST00000494934 CFHP08603 1231 aa10.48□□□□□ -0.73
SRRM1-218ENST00000494934 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
SRRM1-218ENST00000494934 APLP1P51693 650 aa10.47□□□□□ -0.73
SRRM1-218ENST00000494934 MYSM1Q5VVJ2 828 aa10.47□□□□□ -0.73
SRRM1-218ENST00000494934 HLA-CQ95604 372 aa10.46□□□□□ -0.73
SRRM1-218ENST00000494934 KDM4AO75164 1064 aa10.45□□□□□ -0.74
SRRM1-218ENST00000494934 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
SRRM1-218ENST00000494934 RSPH6AQ9H0K4 717 aa10.45□□□□□ -0.74
SRRM1-218ENST00000494934 PPP4CP60510 307 aa10.44□□□□□ -0.74
SRRM1-218ENST00000494934 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
SRRM1-218ENST00000494934 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
SRRM1-218ENST00000494934 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
SRRM1-218ENST00000494934 HOXA2O43364 376 aa10.43□□□□□ -0.74
SRRM1-218ENST00000494934 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
SRRM1-218ENST00000494934 FUT2Q10981 343 aa10.43□□□□□ -0.74
SRRM1-218ENST00000494934 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
SRRM1-218ENST00000494934 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
SRRM1-218ENST00000494934 NDUFV2P19404 249 aa10.42□□□□□ -0.74
SRRM1-218ENST00000494934 RSPH4AQ5TD94 716 aa10.42□□□□□ -0.74
SRRM1-218ENST00000494934 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
SRRM1-218ENST00000494934 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
SRRM1-218ENST00000494934 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
SRRM1-218ENST00000494934 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
SRRM1-218ENST00000494934 PROCA1Q8NCQ7 364 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-218ENST00000494934 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
SRRM1-218ENST00000494934 SPTLC1O15269 473 aa10.4□□□□□ -0.74
SRRM1-218ENST00000494934 PTPN5P54829 565 aa10.4□□□□□ -0.74
SRRM1-218ENST00000494934 RSBN1LQ6PCB5 846 aaPredicted RBP10.4□□□□□ -0.74
SRRM1-218ENST00000494934 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
SRRM1-218ENST00000494934 POLR3EQ9NVU0 708 aa10.4□□□□□ -0.74
SRRM1-218ENST00000494934 PCDHGC3Q9UN70 934 aa10.4□□□□□ -0.74
SRRM1-218ENST00000494934 USP46P62068 366 aa10.39□□□□□ -0.75
SRRM1-218ENST00000494934 FLIIQ13045 1269 aa10.39□□□□□ -0.75
SRRM1-218ENST00000494934 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
SRRM1-218ENST00000494934 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
SRRM1-218ENST00000494934 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
SRRM1-218ENST00000494934 MORN1Q5T089 497 aa10.38□□□□□ -0.75
SRRM1-218ENST00000494934 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
SRRM1-218ENST00000494934 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
SRRM1-218ENST00000494934 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
SRRM1-218ENST00000494934 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
SRRM1-218ENST00000494934 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
SRRM1-218ENST00000494934 MCM6Q14566 821 aa10.37□□□□□ -0.75
SRRM1-218ENST00000494934 DIXDC1Q155Q3 683 aa10.37□□□□□ -0.75
SRRM1-218ENST00000494934 GJA5P36382 358 aa10.36□□□□□ -0.75
SRRM1-218ENST00000494934 TUSC1Q2TAM9 212 aa10.36□□□□□ -0.75
SRRM1-218ENST00000494934 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SRRM1-218ENST00000494934 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
SRRM1-218ENST00000494934 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
SRRM1-218ENST00000494934 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
SRRM1-218ENST00000494934 BLOC1S3Q6QNY0 202 aa10.34□□□□□ -0.75
SRRM1-218ENST00000494934 NYAP1Q6ZVC0 841 aa10.34□□□□□ -0.75
SRRM1-218ENST00000494934 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms