RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 PIK3C2BO00750 1634 aa22.05■■□□□ 1.12
SHISA5-216ENST00000494854 SLIT1O75093 1534 aa22.05■■□□□ 1.12
SHISA5-216ENST00000494854 ARHGAP23Q9P227 1491 aa22.04■■□□□ 1.12
SHISA5-216ENST00000494854 NPHP4O75161 1426 aaPredicted RBP22.03■■□□□ 1.12
SHISA5-216ENST00000494854 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
SHISA5-216ENST00000494854 ZNF335Q9H4Z2 1342 aaPredicted RBP22.03■■□□□ 1.12
SHISA5-216ENST00000494854 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
SHISA5-216ENST00000494854 E9PCH4 1651 aa22■■□□□ 1.11
SHISA5-216ENST00000494854 IQGAP1P46940 1657 aa22■■□□□ 1.11
SHISA5-216ENST00000494854 SCAF11Q99590 1463 aaKnown RBP22■■□□□ 1.11
SHISA5-216ENST00000494854 STAG3Q9UJ98 1225 aa22■■□□□ 1.11
SHISA5-216ENST00000494854 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SHISA5-216ENST00000494854 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
SHISA5-216ENST00000494854 LTKP29376 864 aa21.98■■□□□ 1.11
SHISA5-216ENST00000494854 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
SHISA5-216ENST00000494854 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
SHISA5-216ENST00000494854 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
SHISA5-216ENST00000494854 CPS1P31327 1500 aa21.93■■□□□ 1.1
SHISA5-216ENST00000494854 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
SHISA5-216ENST00000494854 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
SHISA5-216ENST00000494854 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.1
SHISA5-216ENST00000494854 TMEM131LA2VDJ0 1609 aa21.89■■□□□ 1.1
SHISA5-216ENST00000494854 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
SHISA5-216ENST00000494854 HDGFP51858 240 aaKnown RBP21.86■■□□□ 1.09
SHISA5-216ENST00000494854 ZFYVE9O95405 1425 aa21.86■■□□□ 1.09
SHISA5-216ENST00000494854 SPHKAPQ2M3C7 1700 aa21.85■■□□□ 1.09
SHISA5-216ENST00000494854 STRCP1A6NGW2 1772 aa21.83■■□□□ 1.09
SHISA5-216ENST00000494854 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
SHISA5-216ENST00000494854 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
SHISA5-216ENST00000494854 WASHC2AQ641Q2 1341 aa21.81■■□□□ 1.08
SHISA5-216ENST00000494854 SPATA31E1Q6ZUB1 1445 aa21.8■■□□□ 1.08
SHISA5-216ENST00000494854 ANP32CO43423 234 aa21.8■■□□□ 1.08
SHISA5-216ENST00000494854 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
SHISA5-216ENST00000494854 PLEKHG1Q9ULL1 1385 aa21.79■■□□□ 1.08
SHISA5-216ENST00000494854 UBAP1LF5GYI3 381 aa21.78■■□□□ 1.08
SHISA5-216ENST00000494854 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
SHISA5-216ENST00000494854 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
SHISA5-216ENST00000494854 TRPM2O94759 1503 aa21.77■■□□□ 1.08
SHISA5-216ENST00000494854 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
SHISA5-216ENST00000494854 SLC26A8Q96RN1 970 aa21.76■■□□□ 1.07
SHISA5-216ENST00000494854 ZNF326Q5BKZ1 582 aaKnown RBP21.75■■□□□ 1.07
SHISA5-216ENST00000494854 RALGAPBQ86X10 1494 aa21.75■■□□□ 1.07
SHISA5-216ENST00000494854 KCNA6P17658 529 aa21.74■■□□□ 1.07
SHISA5-216ENST00000494854 TOM1O60784 492 aa21.74■■□□□ 1.07
SHISA5-216ENST00000494854 CCER2I3L3R5 266 aa21.73■■□□□ 1.07
SHISA5-216ENST00000494854 CCDC7Q96M83 1385 aa21.73■■□□□ 1.07
SHISA5-216ENST00000494854 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
SHISA5-216ENST00000494854 BCANQ96GW7 911 aa21.72■■□□□ 1.07
SHISA5-216ENST00000494854 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
SHISA5-216ENST00000494854 C11orf95C9JLR9 678 aaPredicted RBP21.71■■□□□ 1.07
SHISA5-216ENST00000494854 KIF1BO60333 1816 aa21.7■■□□□ 1.06
SHISA5-216ENST00000494854 USP47Q96K76 1375 aa21.69■■□□□ 1.06
SHISA5-216ENST00000494854 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
SHISA5-216ENST00000494854 DCAF11Q8TEB1 546 aa21.68■■□□□ 1.06
SHISA5-216ENST00000494854 CHD2O14647 1828 aaKnown RBP21.68■■□□□ 1.06
SHISA5-216ENST00000494854 XIRP1Q702N8 1843 aaKnown RBP21.68■■□□□ 1.06
SHISA5-216ENST00000494854 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
SHISA5-216ENST00000494854 DIP2AQ14689 1571 aa21.67■■□□□ 1.06
SHISA5-216ENST00000494854 NUTM2DQ5VT03 806 aaPredicted RBP21.67■■□□□ 1.06
SHISA5-216ENST00000494854 KDM2AQ9Y2K7 1162 aa21.67■■□□□ 1.06
SHISA5-216ENST00000494854 NKTRP30414 1462 aaKnown RBP21.66■■□□□ 1.06
SHISA5-216ENST00000494854 PIK3R4Q99570 1358 aa21.66■■□□□ 1.06
SHISA5-216ENST00000494854 ALKQ9UM73 1620 aa21.66■■□□□ 1.06
SHISA5-216ENST00000494854 TRPM1Q7Z4N2 1603 aa21.65■■□□□ 1.06
SHISA5-216ENST00000494854 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.06
SHISA5-216ENST00000494854 PROSER2Q86WR7 435 aaPredicted RBP21.63■■□□□ 1.05
SHISA5-216ENST00000494854 TMEM94Q12767 1356 aa21.63■■□□□ 1.05
SHISA5-216ENST00000494854 NEXMIFQ5QGS0 1516 aa21.63■■□□□ 1.05
SHISA5-216ENST00000494854 PRAG1Q86YV5 1406 aa21.62■■□□□ 1.05
SHISA5-216ENST00000494854 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
SHISA5-216ENST00000494854 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
SHISA5-216ENST00000494854 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
SHISA5-216ENST00000494854 RPGRIP1LQ68CZ1 1315 aa21.61■■□□□ 1.05
SHISA5-216ENST00000494854 PIP4K2BP78356 416 aa21.61■■□□□ 1.05
SHISA5-216ENST00000494854 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
SHISA5-216ENST00000494854 NRXN3Q9Y4C0 1643 aa21.6■■□□□ 1.05
SHISA5-216ENST00000494854 VGFO15240 615 aaPredicted RBP21.57■■□□□ 1.04
SHISA5-216ENST00000494854 NCOA3Q9Y6Q9 1424 aa21.57■■□□□ 1.04
SHISA5-216ENST00000494854 ROCK2O75116 1388 aaKnown RBP21.57■■□□□ 1.04
SHISA5-216ENST00000494854 LAMC1P11047 1609 aa21.55■■□□□ 1.04
SHISA5-216ENST00000494854 HSPA1LP34931 641 aa21.53■■□□□ 1.04
SHISA5-216ENST00000494854 AMOTL2Q9Y2J4 779 aa21.53■■□□□ 1.04
SHISA5-216ENST00000494854 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
SHISA5-216ENST00000494854 PPLO60437 1756 aa21.53■■□□□ 1.04
SHISA5-216ENST00000494854 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
SHISA5-216ENST00000494854 MSH6P52701 1360 aa21.51■■□□□ 1.03
SHISA5-216ENST00000494854 GPRASP1Q5JY77 1395 aa21.51■■□□□ 1.03
SHISA5-216ENST00000494854 FAM135BQ49AJ0 1406 aa21.5■■□□□ 1.03
SHISA5-216ENST00000494854 XRN1Q8IZH2 1706 aaKnown RBP21.5■■□□□ 1.03
SHISA5-216ENST00000494854 METP08581 1390 aa21.5■■□□□ 1.03
SHISA5-216ENST00000494854 ST20-MTHFSA0A0A6YYL1 179 aa21.49■■□□□ 1.03
SHISA5-216ENST00000494854 PRKRIP1Q9H875 184 aaPredicted RBP21.49■■□□□ 1.03
SHISA5-216ENST00000494854 NBPF1Q3BBV0 1214 aa21.46■■□□□ 1.03
SHISA5-216ENST00000494854 C19orf44Q9H6X5 657 aa21.46■■□□□ 1.03
SHISA5-216ENST00000494854 SETD1AO15047 1707 aaKnown RBP21.46■■□□□ 1.03
SHISA5-216ENST00000494854 POLR3GLQ9BT43 218 aa21.45■■□□□ 1.02
SHISA5-216ENST00000494854 IFT172Q9UG01 1749 aa21.44■■□□□ 1.02
SHISA5-216ENST00000494854 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
SHISA5-216ENST00000494854 C14orf37Q86TY3 774 aa21.43■■□□□ 1.02
SHISA5-216ENST00000494854 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms