RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
BRD3-206ENST00000494743 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
BRD3-206ENST00000494743 MYOM2P54296 1465 aa17.36■□□□□ 0.37
BRD3-206ENST00000494743 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
BRD3-206ENST00000494743 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
BRD3-206ENST00000494743 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
BRD3-206ENST00000494743 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 NEXMIFQ5QGS0 1516 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 RPGRIP1LQ68CZ1 1315 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 STAC3Q96MF2 364 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 IFT172Q9UG01 1749 aa17.34■□□□□ 0.37
BRD3-206ENST00000494743 NRXN1Q9ULB1 1477 aa17.33■□□□□ 0.37
BRD3-206ENST00000494743 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
BRD3-206ENST00000494743 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
BRD3-206ENST00000494743 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
BRD3-206ENST00000494743 PPLO60437 1756 aa17.3■□□□□ 0.36
BRD3-206ENST00000494743 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
BRD3-206ENST00000494743 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
BRD3-206ENST00000494743 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
BRD3-206ENST00000494743 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
BRD3-206ENST00000494743 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
BRD3-206ENST00000494743 ADGRF5Q8IZF2 1346 aa17.27■□□□□ 0.36
BRD3-206ENST00000494743 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.36
BRD3-206ENST00000494743 MYO5BQ9ULV0 1848 aa17.27■□□□□ 0.36
BRD3-206ENST00000494743 PIK3C2GO75747 1445 aa17.27■□□□□ 0.35
BRD3-206ENST00000494743 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
BRD3-206ENST00000494743 HSPA1LP34931 641 aa17.26■□□□□ 0.35
BRD3-206ENST00000494743 RIMS2Q9UQ26 1411 aa17.26■□□□□ 0.35
BRD3-206ENST00000494743 SLIT1O75093 1534 aa17.26■□□□□ 0.35
BRD3-206ENST00000494743 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
BRD3-206ENST00000494743 ARHGAP23Q9P227 1491 aa17.25■□□□□ 0.35
BRD3-206ENST00000494743 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
BRD3-206ENST00000494743 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
BRD3-206ENST00000494743 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
BRD3-206ENST00000494743 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
BRD3-206ENST00000494743 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
BRD3-206ENST00000494743 THEMISQ8N1K5 641 aaPredicted RBP17.2■□□□□ 0.34
BRD3-206ENST00000494743 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
BRD3-206ENST00000494743 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
BRD3-206ENST00000494743 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
BRD3-206ENST00000494743 LAMC1P11047 1609 aa17.19■□□□□ 0.34
BRD3-206ENST00000494743 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
BRD3-206ENST00000494743 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
BRD3-206ENST00000494743 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
BRD3-206ENST00000494743 ADGRB1O14514 1584 aa17.17■□□□□ 0.34
BRD3-206ENST00000494743 LTKP29376 864 aa17.17■□□□□ 0.34
BRD3-206ENST00000494743 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
BRD3-206ENST00000494743 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
BRD3-206ENST00000494743 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
BRD3-206ENST00000494743 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
BRD3-206ENST00000494743 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
BRD3-206ENST00000494743 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
BRD3-206ENST00000494743 CARD11Q9BXL7 1154 aa17.15■□□□□ 0.34
BRD3-206ENST00000494743 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
BRD3-206ENST00000494743 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
BRD3-206ENST00000494743 USP47Q96K76 1375 aa17.14■□□□□ 0.33
BRD3-206ENST00000494743 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
BRD3-206ENST00000494743 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
BRD3-206ENST00000494743 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
BRD3-206ENST00000494743 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
BRD3-206ENST00000494743 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
BRD3-206ENST00000494743 TOM1O60784 492 aa17.11■□□□□ 0.33
BRD3-206ENST00000494743 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
BRD3-206ENST00000494743 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
BRD3-206ENST00000494743 MED14O60244 1454 aa17.11■□□□□ 0.33
BRD3-206ENST00000494743 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
BRD3-206ENST00000494743 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
BRD3-206ENST00000494743 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
BRD3-206ENST00000494743 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
BRD3-206ENST00000494743 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
BRD3-206ENST00000494743 CPS1P31327 1500 aa17.06■□□□□ 0.32
BRD3-206ENST00000494743 METP08581 1390 aa17.05■□□□□ 0.32
BRD3-206ENST00000494743 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
BRD3-206ENST00000494743 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
BRD3-206ENST00000494743 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
BRD3-206ENST00000494743 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
BRD3-206ENST00000494743 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
BRD3-206ENST00000494743 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
BRD3-206ENST00000494743 NPHP4O75161 1426 aaPredicted RBP17.03■□□□□ 0.32
BRD3-206ENST00000494743 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.32
BRD3-206ENST00000494743 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
BRD3-206ENST00000494743 TECPR2O15040 1411 aa17.01■□□□□ 0.31
BRD3-206ENST00000494743 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
BRD3-206ENST00000494743 BCANQ96GW7 911 aa17■□□□□ 0.31
BRD3-206ENST00000494743 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
BRD3-206ENST00000494743 TESK2Q96S53 571 aa17■□□□□ 0.31
BRD3-206ENST00000494743 ABCC11Q96J66 1382 aa17■□□□□ 0.31
BRD3-206ENST00000494743 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
BRD3-206ENST00000494743 RGS17Q9UGC6 210 aaPredicted RBP16.99■□□□□ 0.31
BRD3-206ENST00000494743 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
BRD3-206ENST00000494743 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
BRD3-206ENST00000494743 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
BRD3-206ENST00000494743 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
BRD3-206ENST00000494743 KNDC1Q76NI1 1749 aa16.97■□□□□ 0.31
BRD3-206ENST00000494743 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
BRD3-206ENST00000494743 STK26Q9P289 416 aa16.96■□□□□ 0.31
BRD3-206ENST00000494743 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.3
BRD3-206ENST00000494743 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
BRD3-206ENST00000494743 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms