RNA–Protein interactions for RNA: ENST00000494683.1

DENND4B-212, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-212ENST00000494683 KIF1BO60333 1816 aa20.77■□□□□ 0.92
DENND4B-212ENST00000494683 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.92
DENND4B-212ENST00000494683 TRIM52Q96A61 297 aa20.77■□□□□ 0.92
DENND4B-212ENST00000494683 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
DENND4B-212ENST00000494683 ALKQ9UM73 1620 aa20.74■□□□□ 0.91
DENND4B-212ENST00000494683 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
DENND4B-212ENST00000494683 NEXMIFQ5QGS0 1516 aa20.72■□□□□ 0.91
DENND4B-212ENST00000494683 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
DENND4B-212ENST00000494683 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
DENND4B-212ENST00000494683 SETD5Q9C0A6 1442 aa20.71■□□□□ 0.91
DENND4B-212ENST00000494683 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
DENND4B-212ENST00000494683 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
DENND4B-212ENST00000494683 SLC26A8Q96RN1 970 aa20.7■□□□□ 0.9
DENND4B-212ENST00000494683 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
DENND4B-212ENST00000494683 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
DENND4B-212ENST00000494683 UBAP1LF5GYI3 381 aa20.69■□□□□ 0.9
DENND4B-212ENST00000494683 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.69■□□□□ 0.9
DENND4B-212ENST00000494683 HDGFP51858 240 aaKnown RBP20.68■□□□□ 0.9
DENND4B-212ENST00000494683 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
DENND4B-212ENST00000494683 NUTM2DQ5VT03 806 aaPredicted RBP20.67■□□□□ 0.9
DENND4B-212ENST00000494683 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
DENND4B-212ENST00000494683 KCNA6P17658 529 aa20.65■□□□□ 0.9
DENND4B-212ENST00000494683 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
DENND4B-212ENST00000494683 BCANQ96GW7 911 aa20.64■□□□□ 0.89
DENND4B-212ENST00000494683 PPLO60437 1756 aa20.64■□□□□ 0.89
DENND4B-212ENST00000494683 FOXD1Q16676 465 aa20.63■□□□□ 0.89
DENND4B-212ENST00000494683 MPHOSPH9Q99550 1183 aa20.62■□□□□ 0.89
DENND4B-212ENST00000494683 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
DENND4B-212ENST00000494683 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
DENND4B-212ENST00000494683 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
DENND4B-212ENST00000494683 TBX22Q9Y458 520 aa20.61■□□□□ 0.89
DENND4B-212ENST00000494683 XRN1Q8IZH2 1706 aaKnown RBP20.61■□□□□ 0.89
DENND4B-212ENST00000494683 TOM1O60784 492 aa20.6■□□□□ 0.89
DENND4B-212ENST00000494683 SETD1AO15047 1707 aaKnown RBP20.6■□□□□ 0.89
DENND4B-212ENST00000494683 IFT172Q9UG01 1749 aa20.6■□□□□ 0.89
DENND4B-212ENST00000494683 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
DENND4B-212ENST00000494683 PIK3R4Q99570 1358 aa20.59■□□□□ 0.89
DENND4B-212ENST00000494683 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
DENND4B-212ENST00000494683 PTPRUQ92729 1446 aa20.56■□□□□ 0.88
DENND4B-212ENST00000494683 PIP4K2BP78356 416 aa20.55■□□□□ 0.88
DENND4B-212ENST00000494683 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
DENND4B-212ENST00000494683 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
DENND4B-212ENST00000494683 RBM33Q96EV2 1170 aaKnown RBP20.52■□□□□ 0.88
DENND4B-212ENST00000494683 RPGRIP1LQ68CZ1 1315 aa20.52■□□□□ 0.87
DENND4B-212ENST00000494683 METP08581 1390 aa20.5■□□□□ 0.87
DENND4B-212ENST00000494683 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
DENND4B-212ENST00000494683 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.48■□□□□ 0.87
DENND4B-212ENST00000494683 HSPA1LP34931 641 aa20.48■□□□□ 0.87
DENND4B-212ENST00000494683 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
DENND4B-212ENST00000494683 MSH6P52701 1360 aa20.47■□□□□ 0.87
DENND4B-212ENST00000494683 HRCP23327 699 aa20.47■□□□□ 0.87
DENND4B-212ENST00000494683 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
DENND4B-212ENST00000494683 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
DENND4B-212ENST00000494683 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
DENND4B-212ENST00000494683 NALCNQ8IZF0 1738 aa20.44■□□□□ 0.86
DENND4B-212ENST00000494683 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
DENND4B-212ENST00000494683 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
DENND4B-212ENST00000494683 PIK3C2GO75747 1445 aa20.42■□□□□ 0.86
DENND4B-212ENST00000494683 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
DENND4B-212ENST00000494683 ASXL1Q8IXJ9 1541 aa20.42■□□□□ 0.86
DENND4B-212ENST00000494683 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
DENND4B-212ENST00000494683 ADGRF5Q8IZF2 1346 aa20.41■□□□□ 0.86
DENND4B-212ENST00000494683 MYOM2P54296 1465 aa20.41■□□□□ 0.86
DENND4B-212ENST00000494683 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
DENND4B-212ENST00000494683 DCCP43146 1447 aa20.39■□□□□ 0.85
DENND4B-212ENST00000494683 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.85
DENND4B-212ENST00000494683 LAMC1P11047 1609 aa20.38■□□□□ 0.85
DENND4B-212ENST00000494683 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
DENND4B-212ENST00000494683 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
DENND4B-212ENST00000494683 MED1Q15648 1581 aaPredicted RBP20.37■□□□□ 0.85
DENND4B-212ENST00000494683 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
DENND4B-212ENST00000494683 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
DENND4B-212ENST00000494683 PHLPP1O60346 1717 aa20.35■□□□□ 0.85
DENND4B-212ENST00000494683 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
DENND4B-212ENST00000494683 TECPR2O15040 1411 aa20.33■□□□□ 0.84
DENND4B-212ENST00000494683 DISP3Q9P2K9 1392 aa20.33■□□□□ 0.84
DENND4B-212ENST00000494683 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
DENND4B-212ENST00000494683 MST1RQ04912 1400 aa20.32■□□□□ 0.84
DENND4B-212ENST00000494683 COL16A1Q07092 1604 aaPredicted RBP20.31■□□□□ 0.84
DENND4B-212ENST00000494683 AHDC1Q5TGY3 1603 aaPredicted RBP20.31■□□□□ 0.84
DENND4B-212ENST00000494683 ATF3P18847 181 aa20.3■□□□□ 0.84
DENND4B-212ENST00000494683 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
DENND4B-212ENST00000494683 NHSL1Q5SYE7 1610 aa20.28■□□□□ 0.84
DENND4B-212ENST00000494683 CDC42BPGQ6DT37 1551 aa20.28■□□□□ 0.84
DENND4B-212ENST00000494683 YTHDC2Q9H6S0 1430 aaKnown RBP20.27■□□□□ 0.83
DENND4B-212ENST00000494683 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
DENND4B-212ENST00000494683 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
DENND4B-212ENST00000494683 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
DENND4B-212ENST00000494683 C14orf93Q9H972 538 aaKnown RBP20.24■□□□□ 0.83
DENND4B-212ENST00000494683 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
DENND4B-212ENST00000494683 CFAP70Q5T0N1 1121 aa20.22■□□□□ 0.83
DENND4B-212ENST00000494683 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
DENND4B-212ENST00000494683 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
DENND4B-212ENST00000494683 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
DENND4B-212ENST00000494683 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
DENND4B-212ENST00000494683 STK26Q9P289 416 aa20.2■□□□□ 0.82
DENND4B-212ENST00000494683 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
DENND4B-212ENST00000494683 FMN2Q9NZ56 1722 aa20.19■□□□□ 0.82
DENND4B-212ENST00000494683 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
DENND4B-212ENST00000494683 KIAA1210Q9ULL0 1709 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms