RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 RSPH4AQ5TD94 716 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 NGEFQ8N5V2 710 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 LETM1O95202 739 aaPredicted RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 ZSCAN20P17040 1043 aaPredicted RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 PDLIM2Q96JY6 352 aa6.11□□□□□ -1.43
PRKD3-210ENST00000494667 CCDC94Q9BW85 323 aaPredicted RBP6.11□□□□□ -1.43
PRKD3-210ENST00000494667 CGNL1Q0VF96 1302 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 WDR62O43379 1518 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 HSP90AB1P08238 724 aaKnown RBP6.1□□□□□ -1.43
PRKD3-210ENST00000494667 SYNMO15061 1565 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 STAC3Q96MF2 364 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 TBC1D2Q9BYX2 928 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 GRIN2AQ12879 1464 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKD3-210ENST00000494667 CSPP1Q1MSJ5 1256 aa6.1□□□□□ -1.43
PRKD3-210ENST00000494667 PER1O15534 1290 aaPredicted RBP6.09□□□□□ -1.43
PRKD3-210ENST00000494667 RANGAP1P46060 587 aaPredicted RBP6.09□□□□□ -1.43
PRKD3-210ENST00000494667 DUSP27Q5VZP5 1158 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 NOL7Q9UMY1 257 aaKnown RBP6.09□□□□□ -1.43
PRKD3-210ENST00000494667 ABCC5O15440 1437 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 PIK3C2GO75747 1445 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 NKTRP30414 1462 aaKnown RBP6.09□□□□□ -1.43
PRKD3-210ENST00000494667 PBRM1Q86U86 1689 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 SNX21Q969T3 373 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 KIAA0586Q9BVV6 1533 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 FAM135AQ9P2D6 1515 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 SHANK2Q9UPX8 1470 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 NPC1L1Q9UHC9 1359 aa6.09□□□□□ -1.43
PRKD3-210ENST00000494667 RBM25P49756 843 aaKnown RBP6.09□□□□□ -1.43
PRKD3-210ENST00000494667 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
PRKD3-210ENST00000494667 TRIM44Q96DX7 344 aaPredicted RBP6.08□□□□□ -1.44
PRKD3-210ENST00000494667 SMC5Q8IY18 1101 aa6.08□□□□□ -1.44
PRKD3-210ENST00000494667 NUP160Q12769 1436 aa6.07□□□□□ -1.44
PRKD3-210ENST00000494667 ZNF445P59923 1031 aa6.07□□□□□ -1.44
PRKD3-210ENST00000494667 A0A0U1RQG5 324 aaPredicted RBP6.07□□□□□ -1.44
PRKD3-210ENST00000494667 C20orf194Q5TEA3 1177 aa6.07□□□□□ -1.44
PRKD3-210ENST00000494667 KLHL34Q8N239 644 aa6.07□□□□□ -1.44
PRKD3-210ENST00000494667 SASS6Q6UVJ0 657 aa6.07□□□□□ -1.44
PRKD3-210ENST00000494667 CLTCL1P53675 1640 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 CDCA7LQ96GN5 454 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 TMEM51Q9NW97 253 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.06□□□□□ -1.44
PRKD3-210ENST00000494667 IQGAP1P46940 1657 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 PLEKHH1Q9ULM0 1364 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 RAB3GAP1Q15042 981 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 NCBP3Q53F19 620 aaKnown RBP6.06□□□□□ -1.44
PRKD3-210ENST00000494667 SCAF11Q99590 1463 aaKnown RBP6.06□□□□□ -1.44
PRKD3-210ENST00000494667 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
PRKD3-210ENST00000494667 PPP4R3BQ5MIZ7 849 aa6.06□□□□□ -1.44
PRKD3-210ENST00000494667 MYOM1P52179 1685 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 GAS2L3Q86XJ1 694 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 NAP1L2Q9ULW6 460 aaPredicted RBP6.05□□□□□ -1.44
PRKD3-210ENST00000494667 KANK1Q14678 1352 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 FAM193AP78312 1265 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 SKAP1Q86WV1 359 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 PLIN1O60240 522 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 SEC24BO95487 1268 aa6.05□□□□□ -1.44
PRKD3-210ENST00000494667 CHRM1P11229 460 aaPredicted RBP6.05□□□□□ -1.44
PRKD3-210ENST00000494667 UPF2Q9HAU5 1272 aaKnown RBP6.05□□□□□ -1.44
PRKD3-210ENST00000494667 LAMC3Q9Y6N6 1575 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 MYO5CQ9NQX4 1742 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 CNGB1Q14028 1251 aaPredicted RBP6.04□□□□□ -1.44
PRKD3-210ENST00000494667 BBXQ8WY36 941 aaPredicted RBP6.04□□□□□ -1.44
PRKD3-210ENST00000494667 BCL11BQ9C0K0 894 aaPredicted RBP6.04□□□□□ -1.44
PRKD3-210ENST00000494667 PRAG1Q86YV5 1406 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 SYNJ2O15056 1496 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 PRIMPOLQ96LW4 560 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 CCDC141Q6ZP82 1450 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 MYRIPQ8NFW9 859 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 ZKSCAN5Q9Y2L8 839 aa6.04□□□□□ -1.44
PRKD3-210ENST00000494667 UQCRHLA0A096LP55 91 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 UQCRHP07919 91 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 HMGN5P82970 282 aaKnown RBP6.03□□□□□ -1.44
PRKD3-210ENST00000494667 KLHL40Q2TBA0 621 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 GBP4Q96PP9 640 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 CFAP74Q9C0B2 1584 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 TNNT2P45379 298 aaPredicted RBP6.03□□□□□ -1.44
PRKD3-210ENST00000494667 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
PRKD3-210ENST00000494667 MSNP26038 577 aaKnown RBP6.03□□□□□ -1.44
PRKD3-210ENST00000494667 WDR7Q9Y4E6 1490 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 UNC13BO14795 1591 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 IGHDP01880 384 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 NASPP49321 788 aaPredicted RBP6.02□□□□□ -1.45
PRKD3-210ENST00000494667 SLKQ9H2G2 1235 aaPredicted RBP6.02□□□□□ -1.45
PRKD3-210ENST00000494667 CDC42BPAQ5VT25 1732 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 SHPRHQ149N8 1683 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 GOLGA2Q08379 1002 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 CLUAP1Q96AJ1 413 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 ATP10AO60312 1499 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 IQSEC2Q5JU85 1478 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 KIAA1210Q9ULL0 1709 aa6.02□□□□□ -1.45
PRKD3-210ENST00000494667 NEURL4Q96JN8 1562 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 ARHGEF5Q12774 1597 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 ASXL1Q8IXJ9 1541 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 SYCP1Q15431 976 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 CREBRFQ8IUR6 639 aa6.01□□□□□ -1.45
PRKD3-210ENST00000494667 PLPPR3Q6T4P5 718 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms