RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 PPP1R15AO75807 674 aaPredicted RBP30.85■■■□□ 2.53
CCDC12-207ENST00000494655 IQSEC2Q5JU85 1478 aa30.84■■■□□ 2.53
CCDC12-207ENST00000494655 ZFYVE9O95405 1425 aa30.83■■■□□ 2.53
CCDC12-207ENST00000494655 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.81■■■□□ 2.52
CCDC12-207ENST00000494655 FBXO41Q8TF61 875 aa30.81■■■□□ 2.52
CCDC12-207ENST00000494655 BCANQ96GW7 911 aa30.79■■■□□ 2.52
CCDC12-207ENST00000494655 MPHOSPH9Q99550 1183 aa30.79■■■□□ 2.52
CCDC12-207ENST00000494655 ZNF326Q5BKZ1 582 aaKnown RBP30.76■■■□□ 2.51
CCDC12-207ENST00000494655 PLEKHG1Q9ULL1 1385 aa30.76■■■□□ 2.51
CCDC12-207ENST00000494655 ILDR1Q86SU0 546 aaPredicted RBP30.75■■■□□ 2.51
CCDC12-207ENST00000494655 CCDC144AA2RUR9 1427 aa30.73■■■□□ 2.51
CCDC12-207ENST00000494655 FOXD1Q16676 465 aa30.7■■■□□ 2.51
CCDC12-207ENST00000494655 DIP2AQ14689 1571 aa30.7■■■□□ 2.5
CCDC12-207ENST00000494655 STRCP1A6NGW2 1772 aa30.69■■■□□ 2.5
CCDC12-207ENST00000494655 HRCP23327 699 aa30.66■■■□□ 2.5
CCDC12-207ENST00000494655 SLC26A8Q96RN1 970 aa30.66■■■□□ 2.5
CCDC12-207ENST00000494655 NEXMIFQ5QGS0 1516 aa30.66■■■□□ 2.5
CCDC12-207ENST00000494655 NUTM2DQ5VT03 806 aaPredicted RBP30.65■■■□□ 2.5
CCDC12-207ENST00000494655 SENP3Q9H4L4 574 aaPredicted RBP30.62■■■□□ 2.49
CCDC12-207ENST00000494655 NWD1Q149M9 1564 aa30.62■■■□□ 2.49
CCDC12-207ENST00000494655 SETBP1Q9Y6X0 1596 aa30.6■■■□□ 2.49
CCDC12-207ENST00000494655 LRRC7Q96NW7 1537 aa30.59■■■□□ 2.49
CCDC12-207ENST00000494655 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
CCDC12-207ENST00000494655 PPLO60437 1756 aa30.59■■■□□ 2.49
CCDC12-207ENST00000494655 RPGRIP1LQ68CZ1 1315 aa30.57■■■□□ 2.48
CCDC12-207ENST00000494655 KCNA6P17658 529 aa30.56■■■□□ 2.48
CCDC12-207ENST00000494655 CHD2O14647 1828 aaKnown RBP30.56■■■□□ 2.48
CCDC12-207ENST00000494655 ADAMTS13Q76LX8 1427 aa30.56■■■□□ 2.48
CCDC12-207ENST00000494655 TBX22Q9Y458 520 aa30.55■■■□□ 2.48
CCDC12-207ENST00000494655 NRXN3Q9Y4C0 1643 aa30.55■■■□□ 2.48
CCDC12-207ENST00000494655 PIK3R4Q99570 1358 aa30.54■■■□□ 2.48
CCDC12-207ENST00000494655 UBAP1LF5GYI3 381 aa30.53■■■□□ 2.48
CCDC12-207ENST00000494655 VGFO15240 615 aaPredicted RBP30.52■■■□□ 2.48
CCDC12-207ENST00000494655 SPATA31E1Q6ZUB1 1445 aa30.5■■■□□ 2.47
CCDC12-207ENST00000494655 IFT172Q9UG01 1749 aa30.5■■■□□ 2.47
CCDC12-207ENST00000494655 XIRP1Q702N8 1843 aaKnown RBP30.47■■■□□ 2.47
CCDC12-207ENST00000494655 TOM1O60784 492 aa30.47■■■□□ 2.47
CCDC12-207ENST00000494655 ANKRD30BQ9BXX2 1392 aa30.45■■■□□ 2.47
CCDC12-207ENST00000494655 RGL3Q3MIN7 710 aa30.45■■■□□ 2.47
CCDC12-207ENST00000494655 PROSER2Q86WR7 435 aaPredicted RBP30.45■■■□□ 2.47
CCDC12-207ENST00000494655 TMEM94Q12767 1356 aa30.43■■■□□ 2.46
CCDC12-207ENST00000494655 TRIM26Q12899 539 aaPredicted RBP30.42■■■□□ 2.46
CCDC12-207ENST00000494655 XRN1Q8IZH2 1706 aaKnown RBP30.41■■■□□ 2.46
CCDC12-207ENST00000494655 SCAF1Q9H7N4 1312 aaKnown RBP30.41■■■□□ 2.46
CCDC12-207ENST00000494655 ALKQ9UM73 1620 aa30.38■■■□□ 2.45
CCDC12-207ENST00000494655 SETD1AO15047 1707 aaKnown RBP30.38■■■□□ 2.45
CCDC12-207ENST00000494655 MSH6P52701 1360 aa30.36■■■□□ 2.45
CCDC12-207ENST00000494655 AMOTL2Q9Y2J4 779 aa30.35■■■□□ 2.45
CCDC12-207ENST00000494655 MYOM2P54296 1465 aa30.34■■■□□ 2.45
CCDC12-207ENST00000494655 METP08581 1390 aa30.34■■■□□ 2.45
CCDC12-207ENST00000494655 PIP4K2BP78356 416 aa30.34■■■□□ 2.45
CCDC12-207ENST00000494655 PTPRUQ92729 1446 aa30.33■■■□□ 2.45
CCDC12-207ENST00000494655 NCOA3Q9Y6Q9 1424 aa30.33■■■□□ 2.45
CCDC12-207ENST00000494655 C14orf37Q86TY3 774 aa30.33■■■□□ 2.45
CCDC12-207ENST00000494655 LAMC1P11047 1609 aa30.32■■■□□ 2.44
CCDC12-207ENST00000494655 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
CCDC12-207ENST00000494655 ADGRF5Q8IZF2 1346 aa30.29■■■□□ 2.44
CCDC12-207ENST00000494655 RBM33Q96EV2 1170 aaKnown RBP30.29■■■□□ 2.44
CCDC12-207ENST00000494655 PTCH1Q13635 1447 aa30.24■■■□□ 2.43
CCDC12-207ENST00000494655 NRXN1Q9ULB1 1477 aa30.23■■■□□ 2.43
CCDC12-207ENST00000494655 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.22■■■□□ 2.43
CCDC12-207ENST00000494655 PRAG1Q86YV5 1406 aa30.21■■■□□ 2.43
CCDC12-207ENST00000494655 STAC3Q96MF2 364 aa30.18■■■□□ 2.42
CCDC12-207ENST00000494655 DCCP43146 1447 aa30.18■■■□□ 2.42
CCDC12-207ENST00000494655 KNDC1Q76NI1 1749 aa30.18■■■□□ 2.42
CCDC12-207ENST00000494655 ATF3P18847 181 aa30.17■■■□□ 2.42
CCDC12-207ENST00000494655 C19orf44Q9H6X5 657 aa30.17■■■□□ 2.42
CCDC12-207ENST00000494655 NALCNQ8IZF0 1738 aa30.16■■■□□ 2.42
CCDC12-207ENST00000494655 CADPS2Q86UW7 1296 aa30.16■■■□□ 2.42
CCDC12-207ENST00000494655 DCAF11Q8TEB1 546 aa30.16■■■□□ 2.42
CCDC12-207ENST00000494655 ROBO1Q9Y6N7 1651 aa30.16■■■□□ 2.42
CCDC12-207ENST00000494655 ADGRL3Q9HAR2 1447 aa30.15■■■□□ 2.42
CCDC12-207ENST00000494655 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
CCDC12-207ENST00000494655 KDM2AQ9Y2K7 1162 aa30.12■■■□□ 2.41
CCDC12-207ENST00000494655 LRPPRCP42704 1394 aaKnown RBP30.12■■■□□ 2.41
CCDC12-207ENST00000494655 DHX57Q6P158 1386 aaKnown RBP30.12■■■□□ 2.41
CCDC12-207ENST00000494655 ROBO2Q9HCK4 1378 aa30.12■■■□□ 2.41
CCDC12-207ENST00000494655 FAM135BQ49AJ0 1406 aa30.12■■■□□ 2.41
CCDC12-207ENST00000494655 HSPA1LP34931 641 aa30.1■■■□□ 2.41
CCDC12-207ENST00000494655 C14orf93Q9H972 538 aaKnown RBP30.1■■■□□ 2.41
CCDC12-207ENST00000494655 TECPR2O15040 1411 aa30.1■■■□□ 2.41
CCDC12-207ENST00000494655 YTHDC2Q9H6S0 1430 aaKnown RBP30.09■■■□□ 2.41
CCDC12-207ENST00000494655 SLAIN2Q9P270 581 aa30.09■■■□□ 2.41
CCDC12-207ENST00000494655 STK26Q9P289 416 aa30.08■■■□□ 2.41
CCDC12-207ENST00000494655 CFAP70Q5T0N1 1121 aa30.06■■■□□ 2.4
CCDC12-207ENST00000494655 TMEM132EQ6IEE7 984 aa30.06■■■□□ 2.4
CCDC12-207ENST00000494655 ABCC11Q96J66 1382 aa30.05■■■□□ 2.4
CCDC12-207ENST00000494655 CDC42BPGQ6DT37 1551 aa30.01■■■□□ 2.39
CCDC12-207ENST00000494655 KIAA1210Q9ULL0 1709 aa30.01■■■□□ 2.39
CCDC12-207ENST00000494655 PHLPP1O60346 1717 aa30■■■□□ 2.39
CCDC12-207ENST00000494655 ADGRB1O14514 1584 aa29.99■■■□□ 2.39
CCDC12-207ENST00000494655 MST1RQ04912 1400 aa29.98■■■□□ 2.39
CCDC12-207ENST00000494655 DLC1Q96QB1 1528 aa29.97■■■□□ 2.39
CCDC12-207ENST00000494655 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
CCDC12-207ENST00000494655 SIN3AQ96ST3 1273 aa29.94■■■□□ 2.38
CCDC12-207ENST00000494655 SIRT1Q96EB6 747 aa29.93■■■□□ 2.38
CCDC12-207ENST00000494655 AHDC1Q5TGY3 1603 aaPredicted RBP29.93■■■□□ 2.38
CCDC12-207ENST00000494655 WAPLQ7Z5K2 1190 aa29.91■■■□□ 2.38
CCDC12-207ENST00000494655 PLEKHH1Q9ULM0 1364 aa29.9■■■□□ 2.38
CCDC12-207ENST00000494655 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms