RNA–Protein interactions for RNA: ENST00000494543.1

ARID4B-213, Transcript of AT-rich interaction domain 4B, humanhuman

TSL 3

Gene ARID4B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4B-213ENST00000494543 FLIIQ13045 1269 aa8.6□□□□□ -1.03
ARID4B-213ENST00000494543 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
ARID4B-213ENST00000494543 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
ARID4B-213ENST00000494543 KHSRPQ92945 711 aaKnown RBP eCLIP8.6□□□□□ -1.035e-8■■■■□ 25.6
ARID4B-213ENST00000494543 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
ARID4B-213ENST00000494543 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
ARID4B-213ENST00000494543 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
ARID4B-213ENST00000494543 SP7Q8TDD2 431 aaPredicted RBP8.59□□□□□ -1.03
ARID4B-213ENST00000494543 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
ARID4B-213ENST00000494543 SALL2Q9Y467 1007 aaPredicted RBP8.59□□□□□ -1.03
ARID4B-213ENST00000494543 DOK7Q18PE1 504 aa8.58□□□□□ -1.04
ARID4B-213ENST00000494543 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
ARID4B-213ENST00000494543 ADAM33Q9BZ11 813 aa8.57□□□□□ -1.04
ARID4B-213ENST00000494543 ADGRG1Q9Y653 693 aa8.57□□□□□ -1.04
ARID4B-213ENST00000494543 WIZO95785 1651 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 RIMBP2O15034 1052 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 AAMPQ13685 434 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 PXYLP1Q8TE99 480 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 ARID3AQ99856 593 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
ARID4B-213ENST00000494543 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
ARID4B-213ENST00000494543 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
ARID4B-213ENST00000494543 CDK11BP21127 795 aaKnown RBP8.55□□□□□ -1.04
ARID4B-213ENST00000494543 ZNF710Q8N1W2 664 aa8.55□□□□□ -1.04
ARID4B-213ENST00000494543 CHD1O14646 1710 aa8.54□□□□□ -1.04
ARID4B-213ENST00000494543 PRSS12P56730 875 aa8.54□□□□□ -1.04
ARID4B-213ENST00000494543 SKIV2LQ15477 1246 aaKnown RBP8.54□□□□□ -1.04
ARID4B-213ENST00000494543 RBM46Q8TBY0 533 aaKnown RBP8.54□□□□□ -1.04
ARID4B-213ENST00000494543 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
ARID4B-213ENST00000494543 EIF4G3O43432 1585 aaKnown RBP8.53□□□□□ -1.04
ARID4B-213ENST00000494543 LOC105371045A0A1W2PR82 267 aa8.53□□□□□ -1.04
ARID4B-213ENST00000494543 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
ARID4B-213ENST00000494543 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
ARID4B-213ENST00000494543 CDCA7LQ96GN5 454 aa8.53□□□□□ -1.04
ARID4B-213ENST00000494543 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
ARID4B-213ENST00000494543 RBM27Q9P2N5 1060 aaKnown RBP8.52□□□□□ -1.05
ARID4B-213ENST00000494543 ARID3CA6NKF2 412 aa8.51□□□□□ -1.05
ARID4B-213ENST00000494543 UBTFP17480 764 aaKnown RBP8.51□□□□□ -1.05
ARID4B-213ENST00000494543 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
ARID4B-213ENST00000494543 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
ARID4B-213ENST00000494543 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 ZSWIM6Q9HCJ5 1215 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 LHX6Q9UPM6 363 aa8.5□□□□□ -1.05
ARID4B-213ENST00000494543 CLASP1Q7Z460 1538 aa8.49□□□□□ -1.05
ARID4B-213ENST00000494543 APBB1O00213 710 aa8.49□□□□□ -1.05
ARID4B-213ENST00000494543 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
ARID4B-213ENST00000494543 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
ARID4B-213ENST00000494543 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
ARID4B-213ENST00000494543 COL9A1P20849 921 aa8.48□□□□□ -1.05
ARID4B-213ENST00000494543 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
ARID4B-213ENST00000494543 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
ARID4B-213ENST00000494543 TOPBP1Q92547 1522 aa8.48□□□□□ -1.05
ARID4B-213ENST00000494543 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
ARID4B-213ENST00000494543 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
ARID4B-213ENST00000494543 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
ARID4B-213ENST00000494543 CLK2P49760 499 aaKnown RBP8.47□□□□□ -1.05
ARID4B-213ENST00000494543 MCM6Q14566 821 aa8.47□□□□□ -1.05
ARID4B-213ENST00000494543 C1orf115Q9H7X2 142 aa8.47□□□□□ -1.05
ARID4B-213ENST00000494543 FAM198AQ9UFP1 575 aa8.47□□□□□ -1.05
ARID4B-213ENST00000494543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
ARID4B-213ENST00000494543 POTEB2H3BUK9 544 aa8.46□□□□□ -1.06
ARID4B-213ENST00000494543 PTPREP23469 700 aa8.46□□□□□ -1.06
ARID4B-213ENST00000494543 DHX37Q8IY37 1157 aaKnown RBP8.46□□□□□ -1.06
ARID4B-213ENST00000494543 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
ARID4B-213ENST00000494543 NUDT18Q6ZVK8 323 aa8.45□□□□□ -1.06
ARID4B-213ENST00000494543 CCDC136Q96JN2 1154 aa8.45□□□□□ -1.06
ARID4B-213ENST00000494543 BCL2L12Q9HB09 334 aa8.45□□□□□ -1.06
ARID4B-213ENST00000494543 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
ARID4B-213ENST00000494543 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
ARID4B-213ENST00000494543 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
ARID4B-213ENST00000494543 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
ARID4B-213ENST00000494543 MAMSTRQ6ZN01 415 aa8.44□□□□□ -1.06
ARID4B-213ENST00000494543 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
ARID4B-213ENST00000494543 A6NJR5 290 aa8.43□□□□□ -1.06
ARID4B-213ENST00000494543 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
ARID4B-213ENST00000494543 TRAK2O60296 914 aa8.43□□□□□ -1.06
ARID4B-213ENST00000494543 EYA1Q99502 592 aa8.43□□□□□ -1.06
ARID4B-213ENST00000494543 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
ARID4B-213ENST00000494543 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
ARID4B-213ENST00000494543 RAD21O60216 631 aa8.42□□□□□ -1.06
ARID4B-213ENST00000494543 TRIM26Q12899 539 aaPredicted RBP8.42□□□□□ -1.06
ARID4B-213ENST00000494543 RIC3Q7Z5B4 369 aa8.42□□□□□ -1.06
ARID4B-213ENST00000494543 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
ARID4B-213ENST00000494543 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
ARID4B-213ENST00000494543 NAP1L5Q96NT1 182 aaPredicted RBP8.42□□□□□ -1.06
ARID4B-213ENST00000494543 DNAJB2P25686 324 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 TATDN2Q93075 761 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 LIMD1Q9UGP4 676 aa8.41□□□□□ -1.06
ARID4B-213ENST00000494543 A0A0U1RQG5 324 aaPredicted RBP8.4□□□□□ -1.06
ARID4B-213ENST00000494543 TRIM6-TRIM34B2RNG4 842 aa8.4□□□□□ -1.06
ARID4B-213ENST00000494543 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
ARID4B-213ENST00000494543 SMAPO00193 183 aa8.4□□□□□ -1.06
ARID4B-213ENST00000494543 CD46P15529 392 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms