RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 CEP170BQ9Y4F5 1589 aaPredicted RBP13.31□□□□□ -0.28
ABCA1-204ENST00000494467 LAMC1P11047 1609 aa13.3□□□□□ -0.28
ABCA1-204ENST00000494467 TRPM1Q7Z4N2 1603 aa13.3□□□□□ -0.28
ABCA1-204ENST00000494467 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
ABCA1-204ENST00000494467 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
ABCA1-204ENST00000494467 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
ABCA1-204ENST00000494467 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.29
ABCA1-204ENST00000494467 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
ABCA1-204ENST00000494467 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
ABCA1-204ENST00000494467 SETBP1Q9Y6X0 1596 aa13.25□□□□□ -0.29
ABCA1-204ENST00000494467 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
ABCA1-204ENST00000494467 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
ABCA1-204ENST00000494467 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
ABCA1-204ENST00000494467 VGFO15240 615 aaPredicted RBP13.24□□□□□ -0.29
ABCA1-204ENST00000494467 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
ABCA1-204ENST00000494467 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
ABCA1-204ENST00000494467 RGL3Q3MIN7 710 aa13.23□□□□□ -0.29
ABCA1-204ENST00000494467 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
ABCA1-204ENST00000494467 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
ABCA1-204ENST00000494467 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
ABCA1-204ENST00000494467 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
ABCA1-204ENST00000494467 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
ABCA1-204ENST00000494467 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
ABCA1-204ENST00000494467 MED14O60244 1454 aa13.2□□□□□ -0.3
ABCA1-204ENST00000494467 IQGAP1P46940 1657 aa13.2□□□□□ -0.3
ABCA1-204ENST00000494467 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
ABCA1-204ENST00000494467 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
ABCA1-204ENST00000494467 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
ABCA1-204ENST00000494467 C14orf93Q9H972 538 aaKnown RBP13.19□□□□□ -0.3
ABCA1-204ENST00000494467 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
ABCA1-204ENST00000494467 PLEKHG1Q9ULL1 1385 aa13.19□□□□□ -0.3
ABCA1-204ENST00000494467 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
ABCA1-204ENST00000494467 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
ABCA1-204ENST00000494467 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
ABCA1-204ENST00000494467 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
ABCA1-204ENST00000494467 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
ABCA1-204ENST00000494467 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
ABCA1-204ENST00000494467 ADAMTS13Q76LX8 1427 aa13.14□□□□□ -0.31
ABCA1-204ENST00000494467 ASXL1Q8IXJ9 1541 aa13.14□□□□□ -0.31
ABCA1-204ENST00000494467 LTKP29376 864 aa13.14□□□□□ -0.31
ABCA1-204ENST00000494467 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
ABCA1-204ENST00000494467 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
ABCA1-204ENST00000494467 ROCK2O75116 1388 aaKnown RBP13.12□□□□□ -0.31
ABCA1-204ENST00000494467 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
ABCA1-204ENST00000494467 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
ABCA1-204ENST00000494467 DLC1Q96QB1 1528 aa13.12□□□□□ -0.31
ABCA1-204ENST00000494467 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
ABCA1-204ENST00000494467 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
ABCA1-204ENST00000494467 ANKLE2Q86XL3 938 aa13.11□□□□□ -0.31
ABCA1-204ENST00000494467 TBX22Q9Y458 520 aa13.11□□□□□ -0.31
ABCA1-204ENST00000494467 TECPR2O15040 1411 aa13.11□□□□□ -0.31
ABCA1-204ENST00000494467 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
ABCA1-204ENST00000494467 CFAP70Q5T0N1 1121 aa13.1□□□□□ -0.31
ABCA1-204ENST00000494467 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
ABCA1-204ENST00000494467 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
ABCA1-204ENST00000494467 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
ABCA1-204ENST00000494467 USP47Q96K76 1375 aa13.08□□□□□ -0.31
ABCA1-204ENST00000494467 XRN1Q8IZH2 1706 aaKnown RBP13.08□□□□□ -0.32
ABCA1-204ENST00000494467 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.32
ABCA1-204ENST00000494467 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
ABCA1-204ENST00000494467 CPS1P31327 1500 aa13.08□□□□□ -0.32
ABCA1-204ENST00000494467 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
ABCA1-204ENST00000494467 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
ABCA1-204ENST00000494467 YTHDC2Q9H6S0 1430 aaKnown RBP13.07□□□□□ -0.32
ABCA1-204ENST00000494467 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
ABCA1-204ENST00000494467 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
ABCA1-204ENST00000494467 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
ABCA1-204ENST00000494467 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
ABCA1-204ENST00000494467 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
ABCA1-204ENST00000494467 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
ABCA1-204ENST00000494467 METP08581 1390 aa13.05□□□□□ -0.32
ABCA1-204ENST00000494467 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
ABCA1-204ENST00000494467 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
ABCA1-204ENST00000494467 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
ABCA1-204ENST00000494467 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
ABCA1-204ENST00000494467 TESK2Q96S53 571 aa13.02□□□□□ -0.33
ABCA1-204ENST00000494467 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
ABCA1-204ENST00000494467 ADGRB2O60241 1585 aa13□□□□□ -0.33
ABCA1-204ENST00000494467 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
ABCA1-204ENST00000494467 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
ABCA1-204ENST00000494467 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
ABCA1-204ENST00000494467 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
ABCA1-204ENST00000494467 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
ABCA1-204ENST00000494467 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
ABCA1-204ENST00000494467 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
ABCA1-204ENST00000494467 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
ABCA1-204ENST00000494467 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
ABCA1-204ENST00000494467 HSPA2P54652 639 aa12.96□□□□□ -0.33
ABCA1-204ENST00000494467 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
ABCA1-204ENST00000494467 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.34
ABCA1-204ENST00000494467 KCNA6P17658 529 aa12.95□□□□□ -0.34
ABCA1-204ENST00000494467 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
ABCA1-204ENST00000494467 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
ABCA1-204ENST00000494467 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
ABCA1-204ENST00000494467 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
ABCA1-204ENST00000494467 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
ABCA1-204ENST00000494467 TMF1P82094 1093 aa12.93□□□□□ -0.34
ABCA1-204ENST00000494467 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
ABCA1-204ENST00000494467 BCANQ96GW7 911 aa12.93□□□□□ -0.34
ABCA1-204ENST00000494467 MYOM1P52179 1685 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms