RNA–Protein interactions for RNA: ENST00000493805.6

ACSS2-222, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 4

Gene ACSS2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-222	ENST00000493805	IQGAP1	P46940	1657 aa		29.66	■■■□□ 2.34
ACSS2-222	ENST00000493805	RIMS2	Q9UQ26	1411 aa		29.66	■■■□□ 2.34
ACSS2-222	ENST00000493805	KIF1B	O60333	1816 aa		29.65	■■■□□ 2.34
ACSS2-222	ENST00000493805	LTBP4	Q8N2S1	1624 aa		29.63	■■■□□ 2.33
ACSS2-222	ENST00000493805	IQSEC2	Q5JU85	1478 aa		29.62	■■■□□ 2.33
ACSS2-222	ENST00000493805	HDGF	P51858	240 aa	Known RBP	29.62	■■■□□ 2.33
ACSS2-222	ENST00000493805	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.59	■■■□□ 2.33
ACSS2-222	ENST00000493805	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	29.59	■■■□□ 2.33
ACSS2-222	ENST00000493805	ANKRD30B	Q9BXX2	1392 aa		29.59	■■■□□ 2.33
ACSS2-222	ENST00000493805	CCDC144A	A2RUR9	1427 aa		29.59	■■■□□ 2.33
ACSS2-222	ENST00000493805	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.57	■■■□□ 2.32
ACSS2-222	ENST00000493805	ZNF326	Q5BKZ1	582 aa	Known RBP	29.56	■■■□□ 2.32
ACSS2-222	ENST00000493805	PLEKHG1	Q9ULL1	1385 aa		29.55	■■■□□ 2.32
ACSS2-222	ENST00000493805	SPATA31E1	Q6ZUB1	1445 aa		29.54	■■■□□ 2.32
ACSS2-222	ENST00000493805	NEXMIF	Q5QGS0	1516 aa		29.53	■■■□□ 2.32
ACSS2-222	ENST00000493805	PPP1R15A	O75807	674 aa	Predicted RBP	29.52	■■■□□ 2.32
ACSS2-222	ENST00000493805	SLC26A8	Q96RN1	970 aa		29.51	■■■□□ 2.31
ACSS2-222	ENST00000493805	RPGRIP1L	Q68CZ1	1315 aa		29.49	■■■□□ 2.31
ACSS2-222	ENST00000493805	SENP3	Q9H4L4	574 aa	Predicted RBP	29.48	■■■□□ 2.31
ACSS2-222	ENST00000493805	STRCP1	A6NGW2	1772 aa		29.47	■■■□□ 2.31
ACSS2-222	ENST00000493805	ADAMTS13	Q76LX8	1427 aa		29.45	■■■□□ 2.31
ACSS2-222	ENST00000493805	RGL3	Q3MIN7	710 aa		29.45	■■■□□ 2.31
ACSS2-222	ENST00000493805	BCAN	Q96GW7	911 aa		29.45	■■■□□ 2.31
ACSS2-222	ENST00000493805	TBX22	Q9Y458	520 aa		29.45	■■■□□ 2.31
ACSS2-222	ENST00000493805	PPL	O60437	1756 aa		29.44	■■■□□ 2.3
ACSS2-222	ENST00000493805	VGF	O15240	615 aa	Predicted RBP	29.42	■■■□□ 2.3
ACSS2-222	ENST00000493805	NRXN3	Q9Y4C0	1643 aa		29.42	■■■□□ 2.3
ACSS2-222	ENST00000493805	SETBP1	Q9Y6X0	1596 aa		29.4	■■■□□ 2.3
ACSS2-222	ENST00000493805	CPS1	P31327	1500 aa		29.4	■■■□□ 2.3
ACSS2-222	ENST00000493805	IFT172	Q9UG01	1749 aa		29.39	■■■□□ 2.3
ACSS2-222	ENST00000493805	KCNA6	P17658	529 aa		29.38	■■■□□ 2.29
ACSS2-222	ENST00000493805	DHX57	Q6P158	1386 aa	Known RBP	29.38	■■■□□ 2.29
ACSS2-222	ENST00000493805	DIP2A	Q14689	1571 aa		29.35	■■■□□ 2.29
ACSS2-222	ENST00000493805	PCGF6	Q9BYE7	350 aa		29.35	■■■□□ 2.29
ACSS2-222	ENST00000493805	CHD2	O14647	1828 aa	Known RBP	29.34	■■■□□ 2.29
ACSS2-222	ENST00000493805	ADGRF5	Q8IZF2	1346 aa		29.34	■■■□□ 2.29
ACSS2-222	ENST00000493805	LRRC7	Q96NW7	1537 aa		29.32	■■■□□ 2.28
ACSS2-222	ENST00000493805	PIK3R4	Q99570	1358 aa		29.31	■■■□□ 2.28
ACSS2-222	ENST00000493805	NWD1	Q149M9	1564 aa		29.3	■■■□□ 2.28
ACSS2-222	ENST00000493805	MET	P08581	1390 aa		29.28	■■■□□ 2.28
ACSS2-222	ENST00000493805	PTPRU	Q92729	1446 aa		29.28	■■■□□ 2.28
ACSS2-222	ENST00000493805	SETD1A	O15047	1707 aa	Known RBP	29.27	■■■□□ 2.28
ACSS2-222	ENST00000493805	ALK	Q9UM73	1620 aa		29.27	■■■□□ 2.28
ACSS2-222	ENST00000493805	XIRP1	Q702N8	1843 aa	Known RBP	29.24	■■■□□ 2.27
ACSS2-222	ENST00000493805	NRXN1	Q9ULB1	1477 aa		29.24	■■■□□ 2.27
ACSS2-222	ENST00000493805	MYOM2	P54296	1465 aa		29.23	■■■□□ 2.27
ACSS2-222	ENST00000493805	SIN3A	Q96ST3	1273 aa		29.23	■■■□□ 2.27
ACSS2-222	ENST00000493805	AMOTL2	Q9Y2J4	779 aa		29.23	■■■□□ 2.27
ACSS2-222	ENST00000493805	NKTR	P30414	1462 aa	Known RBP	29.23	■■■□□ 2.27
ACSS2-222	ENST00000493805	PIK3C2G	O75747	1445 aa		29.22	■■■□□ 2.27
ACSS2-222	ENST00000493805	PROSER2	Q86WR7	435 aa	Predicted RBP	29.21	■■■□□ 2.27
ACSS2-222	ENST00000493805	DCAF11	Q8TEB1	546 aa		29.2	■■■□□ 2.26
ACSS2-222	ENST00000493805	TMEM94	Q12767	1356 aa		29.18	■■■□□ 2.26
ACSS2-222	ENST00000493805	XRN1	Q8IZH2	1706 aa	Known RBP	29.18	■■■□□ 2.26
ACSS2-222	ENST00000493805	RBM33	Q96EV2	1170 aa	Known RBP	29.18	■■■□□ 2.26
ACSS2-222	ENST00000493805	STAC3	Q96MF2	364 aa		29.18	■■■□□ 2.26
ACSS2-222	ENST00000493805	KDM2A	Q9Y2K7	1162 aa		29.17	■■■□□ 2.26
ACSS2-222	ENST00000493805	C14orf93	Q9H972	538 aa	Known RBP	29.16	■■■□□ 2.26
ACSS2-222	ENST00000493805	NEUROD1	Q13562	356 aa		29.12	■■■□□ 2.25
ACSS2-222	ENST00000493805	CFAP70	Q5T0N1	1121 aa		29.12	■■■□□ 2.25
ACSS2-222	ENST00000493805	UBAP1L	F5GYI3	381 aa		29.11	■■■□□ 2.25
ACSS2-222	ENST00000493805	ASXL1	Q8IXJ9	1541 aa		29.1	■■■□□ 2.25
ACSS2-222	ENST00000493805	TMEM132E	Q6IEE7	984 aa		29.09	■■■□□ 2.25
ACSS2-222	ENST00000493805	L3MBTL2	Q969R5	705 aa		29.09	■■■□□ 2.25
ACSS2-222	ENST00000493805	NCOA3	Q9Y6Q9	1424 aa		29.09	■■■□□ 2.25
ACSS2-222	ENST00000493805	PRAG1	Q86YV5	1406 aa		29.08	■■■□□ 2.25
ACSS2-222	ENST00000493805	TOM1	O60784	492 aa		29.06	■■■□□ 2.24
ACSS2-222	ENST00000493805	LAMC1	P11047	1609 aa		29.05	■■■□□ 2.24
ACSS2-222	ENST00000493805	LRPPRC	P42704	1394 aa	Known RBP	29.04	■■■□□ 2.24
ACSS2-222	ENST00000493805	ROBO2	Q9HCK4	1378 aa		29.03	■■■□□ 2.24
ACSS2-222	ENST00000493805	ABCC11	Q96J66	1382 aa		29.02	■■■□□ 2.24
ACSS2-222	ENST00000493805	PTCH1	Q13635	1447 aa		29.02	■■■□□ 2.24
ACSS2-222	ENST00000493805	STK26	Q9P289	416 aa		29	■■■□□ 2.23
ACSS2-222	ENST00000493805	TECPR2	O15040	1411 aa		29	■■■□□ 2.23
ACSS2-222	ENST00000493805	YTHDC2	Q9H6S0	1430 aa	Known RBP	29	■■■□□ 2.23
ACSS2-222	ENST00000493805	ADGRB1	O14514	1584 aa		29	■■■□□ 2.23
ACSS2-222	ENST00000493805	C19orf44	Q9H6X5	657 aa		28.99	■■■□□ 2.23
ACSS2-222	ENST00000493805	MSH6	P52701	1360 aa		28.99	■■■□□ 2.23
ACSS2-222	ENST00000493805	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.97	■■■□□ 2.23
ACSS2-222	ENST00000493805	KNDC1	Q76NI1	1749 aa		28.96	■■■□□ 2.23
ACSS2-222	ENST00000493805	PIP4K2B	P78356	416 aa		28.95	■■■□□ 2.22
ACSS2-222	ENST00000493805	C14orf37	Q86TY3	774 aa		28.95	■■■□□ 2.22
ACSS2-222	ENST00000493805	SIRT1	Q96EB6	747 aa		28.95	■■■□□ 2.22
ACSS2-222	ENST00000493805	KIAA1210	Q9ULL0	1709 aa		28.93	■■■□□ 2.22
ACSS2-222	ENST00000493805	WAPL	Q7Z5K2	1190 aa		28.92	■■■□□ 2.22
ACSS2-222	ENST00000493805	DISP3	Q9P2K9	1392 aa		28.91	■■■□□ 2.22
ACSS2-222	ENST00000493805	ADGRL3	Q9HAR2	1447 aa		28.91	■■■□□ 2.22
ACSS2-222	ENST00000493805	NALCN	Q8IZF0	1738 aa		28.91	■■■□□ 2.22
ACSS2-222	ENST00000493805	NBPF1	Q3BBV0	1214 aa		28.9	■■■□□ 2.22
ACSS2-222	ENST00000493805	SLAIN2	Q9P270	581 aa		28.9	■■■□□ 2.22
ACSS2-222	ENST00000493805	CLSPN	Q9HAW4	1339 aa		28.9	■■■□□ 2.22
ACSS2-222	ENST00000493805	PLEKHH1	Q9ULM0	1364 aa		28.89	■■■□□ 2.22
ACSS2-222	ENST00000493805	FAM135B	Q49AJ0	1406 aa		28.89	■■■□□ 2.22
ACSS2-222	ENST00000493805	CADPS2	Q86UW7	1296 aa		28.89	■■■□□ 2.22
ACSS2-222	ENST00000493805	DCC	P43146	1447 aa		28.87	■■■□□ 2.21
ACSS2-222	ENST00000493805	ATF3	P18847	181 aa		28.87	■■■□□ 2.21
ACSS2-222	ENST00000493805	DLC1	Q96QB1	1528 aa		28.87	■■■□□ 2.21
ACSS2-222	ENST00000493805	SCAF1	Q9H7N4	1312 aa	Known RBP	28.87	■■■□□ 2.21
ACSS2-222	ENST00000493805	TONSL	Q96HA7	1378 aa		28.87	■■■□□ 2.21
ACSS2-222	ENST00000493805	NBPF8	Q3BBV2	869 aa		28.85	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms