RNA–Protein interactions for RNA: ENST00000493658.2

ARID1B-208, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-208ENST00000493658 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
ARID1B-208ENST00000493658 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
ARID1B-208ENST00000493658 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
ARID1B-208ENST00000493658 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
ARID1B-208ENST00000493658 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
ARID1B-208ENST00000493658 KIF1BO60333 1816 aa18.79■□□□□ 0.6
ARID1B-208ENST00000493658 UBAP1LF5GYI3 381 aa18.77■□□□□ 0.6
ARID1B-208ENST00000493658 IFT172Q9UG01 1749 aa18.77■□□□□ 0.59
ARID1B-208ENST00000493658 WASHC2CQ9Y4E1 1318 aa18.76■□□□□ 0.59
ARID1B-208ENST00000493658 SMG6Q86US8 1419 aaKnown RBP18.76■□□□□ 0.59
ARID1B-208ENST00000493658 TESK2Q96S53 571 aa18.76■□□□□ 0.59
ARID1B-208ENST00000493658 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
ARID1B-208ENST00000493658 PARD3Q8TEW0 1356 aa18.76■□□□□ 0.59
ARID1B-208ENST00000493658 MYOM2P54296 1465 aa18.76■□□□□ 0.59
ARID1B-208ENST00000493658 POGZQ7Z3K3 1410 aa18.75■□□□□ 0.59
ARID1B-208ENST00000493658 LRPPRCP42704 1394 aaKnown RBP18.75■□□□□ 0.59
ARID1B-208ENST00000493658 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
ARID1B-208ENST00000493658 MLH3Q9UHC1 1453 aa18.74■□□□□ 0.59
ARID1B-208ENST00000493658 TMF1P82094 1093 aa18.74■□□□□ 0.59
ARID1B-208ENST00000493658 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
ARID1B-208ENST00000493658 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
ARID1B-208ENST00000493658 KIF3BO15066 747 aa18.73■□□□□ 0.59
ARID1B-208ENST00000493658 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
ARID1B-208ENST00000493658 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
ARID1B-208ENST00000493658 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
ARID1B-208ENST00000493658 SYNMO15061 1565 aa18.71■□□□□ 0.59
ARID1B-208ENST00000493658 NEO1Q92859 1461 aa18.71■□□□□ 0.59
ARID1B-208ENST00000493658 ZMYM4Q5VZL5 1548 aa18.7■□□□□ 0.58
ARID1B-208ENST00000493658 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
ARID1B-208ENST00000493658 ABCA6Q8N139 1617 aa18.7■□□□□ 0.58
ARID1B-208ENST00000493658 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
ARID1B-208ENST00000493658 EIF3AQ14152 1382 aaKnown RBP18.69■□□□□ 0.58
ARID1B-208ENST00000493658 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
ARID1B-208ENST00000493658 INSRP06213 1382 aa18.68■□□□□ 0.58
ARID1B-208ENST00000493658 ADGRB3O60242 1522 aa18.68■□□□□ 0.58
ARID1B-208ENST00000493658 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
ARID1B-208ENST00000493658 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
ARID1B-208ENST00000493658 HSPA1LP34931 641 aa18.66■□□□□ 0.58
ARID1B-208ENST00000493658 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
ARID1B-208ENST00000493658 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
ARID1B-208ENST00000493658 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 ARHGEF40Q8TER5 1519 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 UGGT1Q9NYU2 1555 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
ARID1B-208ENST00000493658 MYOM1P52179 1685 aa18.64■□□□□ 0.57
ARID1B-208ENST00000493658 SETBP1Q9Y6X0 1596 aa18.63■□□□□ 0.57
ARID1B-208ENST00000493658 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
ARID1B-208ENST00000493658 SRCAPQ6ZRS2 3230 aa18.62■□□□□ 0.57
ARID1B-208ENST00000493658 ABCC3O15438 1527 aa18.62■□□□□ 0.57
ARID1B-208ENST00000493658 PPLO60437 1756 aa18.62■□□□□ 0.57
ARID1B-208ENST00000493658 ZC3H13Q5T200 1668 aaKnown RBP18.61■□□□□ 0.57
ARID1B-208ENST00000493658 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
ARID1B-208ENST00000493658 PANK3Q9H999 370 aa18.61■□□□□ 0.57
ARID1B-208ENST00000493658 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
ARID1B-208ENST00000493658 DIP2CQ9Y2E4 1556 aa18.6■□□□□ 0.57
ARID1B-208ENST00000493658 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
ARID1B-208ENST00000493658 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
ARID1B-208ENST00000493658 FER1L4A9Z1Z3 1794 aa18.58■□□□□ 0.56
ARID1B-208ENST00000493658 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
ARID1B-208ENST00000493658 ASXL1Q8IXJ9 1541 aa18.57■□□□□ 0.56
ARID1B-208ENST00000493658 NPATQ14207 1427 aa18.57■□□□□ 0.56
ARID1B-208ENST00000493658 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
ARID1B-208ENST00000493658 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
ARID1B-208ENST00000493658 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
ARID1B-208ENST00000493658 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
ARID1B-208ENST00000493658 CC2D1BQ5T0F9 858 aaKnown RBP18.53■□□□□ 0.56
ARID1B-208ENST00000493658 NOS1P29475 1434 aa18.52■□□□□ 0.56
ARID1B-208ENST00000493658 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
ARID1B-208ENST00000493658 ERVK-7P63135 1459 aa18.52■□□□□ 0.55
ARID1B-208ENST00000493658 SIGLEC1Q9BZZ2 1709 aa18.52■□□□□ 0.55
ARID1B-208ENST00000493658 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
ARID1B-208ENST00000493658 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
ARID1B-208ENST00000493658 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
ARID1B-208ENST00000493658 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
ARID1B-208ENST00000493658 MLECQ14165 292 aa18.5■□□□□ 0.55
ARID1B-208ENST00000493658 CEBPAP49715 358 aaPredicted RBP18.49■□□□□ 0.55
ARID1B-208ENST00000493658 CFAP70Q5T0N1 1121 aa18.49■□□□□ 0.55
ARID1B-208ENST00000493658 QRICH2Q9H0J4 1663 aa18.49■□□□□ 0.55
ARID1B-208ENST00000493658 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
ARID1B-208ENST00000493658 RGS17Q9UGC6 210 aaPredicted RBP18.47■□□□□ 0.55
ARID1B-208ENST00000493658 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
ARID1B-208ENST00000493658 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
ARID1B-208ENST00000493658 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
ARID1B-208ENST00000493658 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
ARID1B-208ENST00000493658 SETD1BQ9UPS6 1966 aaKnown RBP18.45■□□□□ 0.54
ARID1B-208ENST00000493658 MYT1Q01538 1121 aa18.45■□□□□ 0.54
ARID1B-208ENST00000493658 GGT6Q6P531 493 aa18.45■□□□□ 0.54
ARID1B-208ENST00000493658 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
ARID1B-208ENST00000493658 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
ARID1B-208ENST00000493658 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
ARID1B-208ENST00000493658 C14orf93Q9H972 538 aaKnown RBP18.42■□□□□ 0.54
ARID1B-208ENST00000493658 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
ARID1B-208ENST00000493658 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
ARID1B-208ENST00000493658 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
ARID1B-208ENST00000493658 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
ARID1B-208ENST00000493658 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
ARID1B-208ENST00000493658 TOM1O60784 492 aa18.39■□□□□ 0.53
ARID1B-208ENST00000493658 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms