RNA–Protein interactions for RNA: ENST00000493222.5

UGP2-223, Transcript of UDP-glucose pyrophosphorylase 2, human

TSL 3

Gene UGP2, Length 864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UGP2-223	ENST00000493222	NWD1	Q149M9	1564 aa		31.68	■■■□□ 2.66
UGP2-223	ENST00000493222	RIMS2	Q9UQ26	1411 aa		31.66	■■■□□ 2.66
UGP2-223	ENST00000493222	SPHKAP	Q2M3C7	1700 aa		31.66	■■■□□ 2.66
UGP2-223	ENST00000493222	SLC26A8	Q96RN1	970 aa		31.66	■■■□□ 2.66
UGP2-223	ENST00000493222	NKTR	P30414	1462 aa	Known RBP	31.62	■■■□□ 2.65
UGP2-223	ENST00000493222	ILDR2	Q71H61	639 aa		31.62	■■■□□ 2.65
UGP2-223	ENST00000493222	PLEKHG1	Q9ULL1	1385 aa		31.62	■■■□□ 2.65
UGP2-223	ENST00000493222	BCAN	Q96GW7	911 aa		31.61	■■■□□ 2.65
UGP2-223	ENST00000493222	MED1	Q15648	1581 aa	Predicted RBP	31.6	■■■□□ 2.65
UGP2-223	ENST00000493222	PPP1R15A	O75807	674 aa	Predicted RBP	31.6	■■■□□ 2.65
UGP2-223	ENST00000493222	CHGA	P10645	457 aa	Known RBP	31.6	■■■□□ 2.65
UGP2-223	ENST00000493222	CHD2	O14647	1828 aa	Known RBP	31.6	■■■□□ 2.65
UGP2-223	ENST00000493222	KCNA6	P17658	529 aa		31.59	■■■□□ 2.65
UGP2-223	ENST00000493222	TMEM94	Q12767	1356 aa		31.58	■■■□□ 2.65
UGP2-223	ENST00000493222	SENP3	Q9H4L4	574 aa	Predicted RBP	31.58	■■■□□ 2.65
UGP2-223	ENST00000493222	HDGF	P51858	240 aa	Known RBP	31.56	■■■□□ 2.64
UGP2-223	ENST00000493222	NAIP	Q13075	1403 aa		31.54	■■■□□ 2.64
UGP2-223	ENST00000493222	DIP2A	Q14689	1571 aa		31.54	■■■□□ 2.64
UGP2-223	ENST00000493222	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.52	■■■□□ 2.64
UGP2-223	ENST00000493222	PROSER2	Q86WR7	435 aa	Predicted RBP	31.5	■■■□□ 2.63
UGP2-223	ENST00000493222	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.47	■■■□□ 2.63
UGP2-223	ENST00000493222	RBM33	Q96EV2	1170 aa	Known RBP	31.47	■■■□□ 2.63
UGP2-223	ENST00000493222	CLTCL1	P53675	1640 aa		31.46	■■■□□ 2.63
UGP2-223	ENST00000493222	ROBO1	Q9Y6N7	1651 aa		31.46	■■■□□ 2.63
UGP2-223	ENST00000493222	ADAMTS13	Q76LX8	1427 aa		31.46	■■■□□ 2.63
UGP2-223	ENST00000493222	TRPM2	O94759	1503 aa		31.45	■■■□□ 2.63
UGP2-223	ENST00000493222	HFM1	A2PYH4	1435 aa		31.44	■■■□□ 2.62
UGP2-223	ENST00000493222	KIF1B	O60333	1816 aa		31.42	■■■□□ 2.62
UGP2-223	ENST00000493222	TBX22	Q9Y458	520 aa		31.42	■■■□□ 2.62
UGP2-223	ENST00000493222	MSH6	P52701	1360 aa		31.42	■■■□□ 2.62
UGP2-223	ENST00000493222	FAM135B	Q49AJ0	1406 aa		31.41	■■■□□ 2.62
UGP2-223	ENST00000493222	NRXN3	Q9Y4C0	1643 aa		31.41	■■■□□ 2.62
UGP2-223	ENST00000493222	SOCS7	O14512	581 aa		31.39	■■■□□ 2.62
UGP2-223	ENST00000493222	SETBP1	Q9Y6X0	1596 aa		31.38	■■■□□ 2.61
UGP2-223	ENST00000493222	PIK3R4	Q99570	1358 aa		31.37	■■■□□ 2.61
UGP2-223	ENST00000493222	NEXMIF	Q5QGS0	1516 aa		31.34	■■■□□ 2.61
UGP2-223	ENST00000493222	ZNF326	Q5BKZ1	582 aa	Known RBP	31.33	■■■□□ 2.61
UGP2-223	ENST00000493222	XRN1	Q8IZH2	1706 aa	Known RBP	31.32	■■■□□ 2.6
UGP2-223	ENST00000493222	TRIM52	Q96A61	297 aa		31.31	■■■□□ 2.6
UGP2-223	ENST00000493222	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.31	■■■□□ 2.6
UGP2-223	ENST00000493222	NCOA3	Q9Y6Q9	1424 aa		31.31	■■■□□ 2.6
UGP2-223	ENST00000493222	PHF23	Q9BUL5	403 aa	Predicted RBP	31.29	■■■□□ 2.6
UGP2-223	ENST00000493222	PHLPP1	O60346	1717 aa		31.29	■■■□□ 2.6
UGP2-223	ENST00000493222	PTPRU	Q92729	1446 aa		31.28	■■■□□ 2.6
UGP2-223	ENST00000493222	C14orf37	Q86TY3	774 aa		31.25	■■■□□ 2.59
UGP2-223	ENST00000493222	SLAIN2	Q9P270	581 aa		31.23	■■■□□ 2.59
UGP2-223	ENST00000493222	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.22	■■■□□ 2.59
UGP2-223	ENST00000493222	AMOTL2	Q9Y2J4	779 aa		31.22	■■■□□ 2.59
UGP2-223	ENST00000493222	PPL	O60437	1756 aa		31.19	■■■□□ 2.58
UGP2-223	ENST00000493222	SETD1A	O15047	1707 aa	Known RBP	31.18	■■■□□ 2.58
UGP2-223	ENST00000493222	MET	P08581	1390 aa		31.17	■■■□□ 2.58
UGP2-223	ENST00000493222	COL16A1	Q07092	1604 aa	Predicted RBP	31.16	■■■□□ 2.58
UGP2-223	ENST00000493222	CADPS2	Q86UW7	1296 aa		31.15	■■■□□ 2.58
UGP2-223	ENST00000493222	C19orf44	Q9H6X5	657 aa		31.15	■■■□□ 2.58
UGP2-223	ENST00000493222	ATF3	P18847	181 aa		31.13	■■■□□ 2.57
UGP2-223	ENST00000493222	DCC	P43146	1447 aa		31.13	■■■□□ 2.57
UGP2-223	ENST00000493222	NALCN	Q8IZF0	1738 aa		31.12	■■■□□ 2.57
UGP2-223	ENST00000493222	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.11	■■■□□ 2.57
UGP2-223	ENST00000493222	FOXD1	Q16676	465 aa		31.07	■■■□□ 2.56
UGP2-223	ENST00000493222	JCAD	Q9P266	1359 aa		31.05	■■■□□ 2.56
UGP2-223	ENST00000493222	VGF	O15240	615 aa	Predicted RBP	31.05	■■■□□ 2.56
UGP2-223	ENST00000493222	CCDC144A	A2RUR9	1427 aa		31.05	■■■□□ 2.56
UGP2-223	ENST00000493222	IFT172	Q9UG01	1749 aa		31.04	■■■□□ 2.56
UGP2-223	ENST00000493222	RPGRIP1L	Q68CZ1	1315 aa		31.04	■■■□□ 2.56
UGP2-223	ENST00000493222	ADGRL3	Q9HAR2	1447 aa		31.04	■■■□□ 2.56
UGP2-223	ENST00000493222	SHPRH	Q149N8	1683 aa		31.03	■■■□□ 2.56
UGP2-223	ENST00000493222	ASXL1	Q8IXJ9	1541 aa		31.02	■■■□□ 2.56
UGP2-223	ENST00000493222	MST1R	Q04912	1400 aa		31.01	■■■□□ 2.55
UGP2-223	ENST00000493222	PTCH1	Q13635	1447 aa		31.01	■■■□□ 2.55
UGP2-223	ENST00000493222	RGS17	Q9UGC6	210 aa	Predicted RBP	31.01	■■■□□ 2.55
UGP2-223	ENST00000493222	NHSL1	Q5SYE7	1610 aa		31	■■■□□ 2.55
UGP2-223	ENST00000493222	MPHOSPH9	Q99550	1183 aa		30.99	■■■□□ 2.55
UGP2-223	ENST00000493222	BRINP3	Q76B58	766 aa		30.98	■■■□□ 2.55
UGP2-223	ENST00000493222	PRAG1	Q86YV5	1406 aa		30.96	■■■□□ 2.55
UGP2-223	ENST00000493222	SPATA31E1	Q6ZUB1	1445 aa		30.95	■■■□□ 2.54
UGP2-223	ENST00000493222	SETD5	Q9C0A6	1442 aa		30.95	■■■□□ 2.54
UGP2-223	ENST00000493222	ROBO2	Q9HCK4	1378 aa		30.92	■■■□□ 2.54
UGP2-223	ENST00000493222	LRP6	O75581	1613 aa		30.92	■■■□□ 2.54
UGP2-223	ENST00000493222	SPATA31A6	Q5VVP1	1343 aa		30.9	■■■□□ 2.54
UGP2-223	ENST00000493222	ACIN1	Q9UKV3	1341 aa	Known RBP	30.9	■■■□□ 2.54
UGP2-223	ENST00000493222	RGL3	Q3MIN7	710 aa		30.87	■■■□□ 2.53
UGP2-223	ENST00000493222	ADGRF5	Q8IZF2	1346 aa		30.87	■■■□□ 2.53
UGP2-223	ENST00000493222	ANKRD30B	Q9BXX2	1392 aa		30.87	■■■□□ 2.53
UGP2-223	ENST00000493222	KNDC1	Q76NI1	1749 aa		30.85	■■■□□ 2.53
UGP2-223	ENST00000493222	POTEA	Q6S8J7	498 aa		30.85	■■■□□ 2.53
UGP2-223	ENST00000493222	C1orf167	Q5SNV9	1468 aa		30.84	■■■□□ 2.53
UGP2-223	ENST00000493222	RAB3GAP2	Q9H2M9	1393 aa		30.84	■■■□□ 2.53
UGP2-223	ENST00000493222	LAMC1	P11047	1609 aa		30.82	■■■□□ 2.52
UGP2-223	ENST00000493222	PIK3C2G	O75747	1445 aa		30.81	■■■□□ 2.52
UGP2-223	ENST00000493222	CDC42BPG	Q6DT37	1551 aa		30.81	■■■□□ 2.52
UGP2-223	ENST00000493222	MEX3C	Q5U5Q3	659 aa	Known RBP	30.8	■■■□□ 2.52
UGP2-223	ENST00000493222	TECPR2	O15040	1411 aa		30.77	■■■□□ 2.52
UGP2-223	ENST00000493222	DDX17	Q92841	729 aa	Known RBP	30.76	■■■□□ 2.51
UGP2-223	ENST00000493222	MYOM2	P54296	1465 aa		30.74	■■■□□ 2.51
UGP2-223	ENST00000493222	LRPPRC	P42704	1394 aa	Known RBP	30.73	■■■□□ 2.51
UGP2-223	ENST00000493222	LRRC59	Q96AG4	307 aa	Known RBP	30.72	■■■□□ 2.51
UGP2-223	ENST00000493222	NUTM2B	A6NNL0	878 aa	Predicted RBP	30.71	■■■□□ 2.51
UGP2-223	ENST00000493222	NUTM2E	B1AL46	878 aa	Predicted RBP	30.71	■■■□□ 2.51
UGP2-223	ENST00000493222	NUTM2A	Q8IVF1	878 aa	Predicted RBP	30.71	■■■□□ 2.51
UGP2-223	ENST00000493222	STK26	Q9P289	416 aa		30.71	■■■□□ 2.51

Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms