RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 ABCA9Q8IUA7 1624 aa8.28□□□□□ -1.08
NF1-215ENST00000493220 MLH3Q9UHC1 1453 aa8.28□□□□□ -1.08
NF1-215ENST00000493220 CDK11BP21127 795 aaKnown RBP8.28□□□□□ -1.08
NF1-215ENST00000493220 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
NF1-215ENST00000493220 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
NF1-215ENST00000493220 COG3Q96JB2 828 aa8.28□□□□□ -1.08
NF1-215ENST00000493220 TNNT2P45379 298 aaPredicted RBP8.27□□□□□ -1.09
NF1-215ENST00000493220 ZMYM3Q14202 1370 aa8.27□□□□□ -1.09
NF1-215ENST00000493220 GLI2P10070 1586 aa8.27□□□□□ -1.09
NF1-215ENST00000493220 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
NF1-215ENST00000493220 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
NF1-215ENST00000493220 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
NF1-215ENST00000493220 CEBPAP49715 358 aaPredicted RBP8.26□□□□□ -1.09
NF1-215ENST00000493220 FBXO31Q5XUX0 539 aaPredicted RBP8.26□□□□□ -1.09
NF1-215ENST00000493220 SOX12O15370 315 aa8.25□□□□□ -1.09
NF1-215ENST00000493220 KDM5DQ9BY66 1539 aa8.25□□□□□ -1.09
NF1-215ENST00000493220 AMPHP49418 695 aa8.25□□□□□ -1.09
NF1-215ENST00000493220 CALD1Q05682 793 aaKnown RBP8.25□□□□□ -1.09
NF1-215ENST00000493220 RTF1Q92541 710 aaKnown RBP8.25□□□□□ -1.09
NF1-215ENST00000493220 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
NF1-215ENST00000493220 KLHL34Q8N239 644 aa8.24□□□□□ -1.09
NF1-215ENST00000493220 NUTM2FA1L443 756 aa8.24□□□□□ -1.09
NF1-215ENST00000493220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.24□□□□□ -1.094e-8■□□□□ 8.9
NF1-215ENST00000493220 PRAM1Q96QH2 718 aa8.24□□□□□ -1.09
NF1-215ENST00000493220 RIMS2Q9UQ26 1411 aa8.24□□□□□ -1.09
NF1-215ENST00000493220 RPRD2Q5VT52 1461 aaKnown RBP8.23□□□□□ -1.09
NF1-215ENST00000493220 IDI1Q13907 227 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 EVA1CP58658 441 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 PTPRKQ15262 1439 aa8.23□□□□□ -1.09
NF1-215ENST00000493220 EIF2AK4Q9P2K8 1649 aaKnown RBP8.23□□□□□ -1.09
NF1-215ENST00000493220 LRPPRCP42704 1394 aaKnown RBP8.22□□□□□ -1.09
NF1-215ENST00000493220 ESCO1Q5FWF5 840 aa8.22□□□□□ -1.09
NF1-215ENST00000493220 ZNF692Q9BU19 519 aaPredicted RBP8.22□□□□□ -1.09
NF1-215ENST00000493220 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
NF1-215ENST00000493220 CCER2I3L3R5 266 aa8.22□□□□□ -1.09
NF1-215ENST00000493220 NOS1P29475 1434 aa8.22□□□□□ -1.09
NF1-215ENST00000493220 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
NF1-215ENST00000493220 MBD5Q9P267 1494 aa8.21□□□□□ -1.09
NF1-215ENST00000493220 SLC26A8Q96RN1 970 aa8.21□□□□□ -1.09
NF1-215ENST00000493220 CDC42BPAQ5VT25 1732 aa8.21□□□□□ -1.09
NF1-215ENST00000493220 YEATS2Q9ULM3 1422 aa8.21□□□□□ -1.1
NF1-215ENST00000493220 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.1
NF1-215ENST00000493220 PANK3Q9H999 370 aa8.21□□□□□ -1.1
NF1-215ENST00000493220 SALL2Q9Y467 1007 aaPredicted RBP8.21□□□□□ -1.1
NF1-215ENST00000493220 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
NF1-215ENST00000493220 CDK19Q9BWU1 502 aa8.2□□□□□ -1.1
NF1-215ENST00000493220 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
NF1-215ENST00000493220 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
NF1-215ENST00000493220 MSH6P52701 1360 aa8.19□□□□□ -1.1
NF1-215ENST00000493220 CHMP4BQ9H444 224 aaKnown RBP8.19□□□□□ -1.1
NF1-215ENST00000493220 DIP2BQ9P265 1576 aa8.19□□□□□ -1.1
NF1-215ENST00000493220 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
NF1-215ENST00000493220 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 MYBBP1AQ9BQG0 1328 aaKnown RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 U2AF1L5P0DN76 240 aaPredicted RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 MS4A1P11836 297 aa8.18□□□□□ -1.1
NF1-215ENST00000493220 U2AF1Q01081 240 aaKnown RBP eCLIP8.18□□□□□ -1.12e-6■□□□□ 9.2
NF1-215ENST00000493220 LAS1LQ9Y4W2 734 aaKnown RBP8.18□□□□□ -1.1
NF1-215ENST00000493220 GLIPR1L2Q4G1C9 344 aa8.18□□□□□ -1.1
NF1-215ENST00000493220 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
NF1-215ENST00000493220 MIER1Q8N108 512 aa8.17□□□□□ -1.1
NF1-215ENST00000493220 NLRP1Q9C000 1473 aa8.17□□□□□ -1.1
NF1-215ENST00000493220 NINLQ9Y2I6 1382 aa8.17□□□□□ -1.1
NF1-215ENST00000493220 CCDC7Q96M83 1385 aa8.16□□□□□ -1.1
NF1-215ENST00000493220 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
NF1-215ENST00000493220 CROCC2H7BZ55 1655 aa8.16□□□□□ -1.1
NF1-215ENST00000493220 ARHGEF12Q9NZN5 1544 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 CADPS2Q86UW7 1296 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 ABTB2Q8N961 1025 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 NEUROD2Q15784 382 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 ADGRF5Q8IZF2 1346 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 NPHP1O15259 732 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 TOM1O60784 492 aa8.15□□□□□ -1.1
NF1-215ENST00000493220 PIP4K2BP78356 416 aa8.15□□□□□ -1.11
NF1-215ENST00000493220 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.11
NF1-215ENST00000493220 PZPP20742 1482 aa8.15□□□□□ -1.11
NF1-215ENST00000493220 CDC42BPBQ9Y5S2 1711 aa8.14□□□□□ -1.11
NF1-215ENST00000493220 NLRP6P59044 892 aa8.14□□□□□ -1.11
NF1-215ENST00000493220 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
NF1-215ENST00000493220 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
NF1-215ENST00000493220 WASHC2AQ641Q2 1341 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 DIAPH1O60610 1272 aaKnown RBP8.13□□□□□ -1.11
NF1-215ENST00000493220 NUDT16Q96DE0 195 aaKnown RBP8.13□□□□□ -1.11
NF1-215ENST00000493220 PHF23Q9BUL5 403 aaPredicted RBP8.13□□□□□ -1.11
NF1-215ENST00000493220 ARHGEF40Q8TER5 1519 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 KCNH5Q8NCM2 988 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 EFCAB6Q5THR3 1501 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 TET3O43151 1660 aa8.13□□□□□ -1.11
NF1-215ENST00000493220 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
NF1-215ENST00000493220 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 CCDC61Q9Y6R9 512 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 ABCC3O15438 1527 aa8.12□□□□□ -1.11
NF1-215ENST00000493220 RALGAPBQ86X10 1494 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms