RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
SAMM50-204ENST00000493161 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
SAMM50-204ENST00000493161 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
SAMM50-204ENST00000493161 ANKRD50Q9ULJ7 1429 aa21.34■■□□□ 1.01
SAMM50-204ENST00000493161 NKTRP30414 1462 aaKnown RBP21.33■■□□□ 1.01
SAMM50-204ENST00000493161 MYO5BQ9ULV0 1848 aa21.32■■□□□ 1
SAMM50-204ENST00000493161 RPRD2Q5VT52 1461 aaKnown RBP21.31■■□□□ 1
SAMM50-204ENST00000493161 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
SAMM50-204ENST00000493161 PLEKHG1Q9ULL1 1385 aa21.3■■□□□ 1
SAMM50-204ENST00000493161 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
SAMM50-204ENST00000493161 MSH6P52701 1360 aa21.29■■□□□ 1
SAMM50-204ENST00000493161 SLAIN2Q9P270 581 aa21.29■■□□□ 1
SAMM50-204ENST00000493161 TMEM131LA2VDJ0 1609 aa21.29■■□□□ 1
SAMM50-204ENST00000493161 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
SAMM50-204ENST00000493161 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
SAMM50-204ENST00000493161 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
SAMM50-204ENST00000493161 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
SAMM50-204ENST00000493161 CHGAP10645 457 aaKnown RBP21.24■□□□□ 0.99
SAMM50-204ENST00000493161 UNC13BO14795 1591 aa21.23■□□□□ 0.99
SAMM50-204ENST00000493161 TBX22Q9Y458 520 aa21.23■□□□□ 0.99
SAMM50-204ENST00000493161 E9PCH4 1651 aa21.22■□□□□ 0.99
SAMM50-204ENST00000493161 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
SAMM50-204ENST00000493161 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
SAMM50-204ENST00000493161 JCADQ9P266 1359 aa21.2■□□□□ 0.98
SAMM50-204ENST00000493161 COL16A1Q07092 1604 aaPredicted RBP21.19■□□□□ 0.98
SAMM50-204ENST00000493161 C14orf37Q86TY3 774 aa21.17■□□□□ 0.98
SAMM50-204ENST00000493161 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
SAMM50-204ENST00000493161 SETD1AO15047 1707 aaKnown RBP21.16■□□□□ 0.98
SAMM50-204ENST00000493161 LRP6O75581 1613 aa21.15■□□□□ 0.98
SAMM50-204ENST00000493161 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
SAMM50-204ENST00000493161 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
SAMM50-204ENST00000493161 IQGAP3Q86VI3 1631 aa21.15■□□□□ 0.98
SAMM50-204ENST00000493161 PTPRUQ92729 1446 aa21.13■□□□□ 0.97
SAMM50-204ENST00000493161 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
SAMM50-204ENST00000493161 DIP2AQ14689 1571 aa21.12■□□□□ 0.97
SAMM50-204ENST00000493161 C19orf44Q9H6X5 657 aa21.12■□□□□ 0.97
SAMM50-204ENST00000493161 NUP155O75694 1391 aa21.11■□□□□ 0.97
SAMM50-204ENST00000493161 AMOTL2Q9Y2J4 779 aa21.11■□□□□ 0.97
SAMM50-204ENST00000493161 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
SAMM50-204ENST00000493161 ATF3P18847 181 aa21.1■□□□□ 0.97
SAMM50-204ENST00000493161 ITGAEP38570 1179 aa21.1■□□□□ 0.97
SAMM50-204ENST00000493161 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
SAMM50-204ENST00000493161 AHDC1Q5TGY3 1603 aaPredicted RBP21.09■□□□□ 0.97
SAMM50-204ENST00000493161 TRPM2O94759 1503 aa21.09■□□□□ 0.97
SAMM50-204ENST00000493161 SPATA31A6Q5VVP1 1343 aa21.07■□□□□ 0.96
SAMM50-204ENST00000493161 MEX3CQ5U5Q3 659 aaKnown RBP21.06■□□□□ 0.96
SAMM50-204ENST00000493161 BRINP3Q76B58 766 aa21.06■□□□□ 0.96
SAMM50-204ENST00000493161 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
SAMM50-204ENST00000493161 NRXN3Q9Y4C0 1643 aa21.06■□□□□ 0.96
SAMM50-204ENST00000493161 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
SAMM50-204ENST00000493161 XRN1Q8IZH2 1706 aaKnown RBP21.02■□□□□ 0.96
SAMM50-204ENST00000493161 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
SAMM50-204ENST00000493161 METP08581 1390 aa21.01■□□□□ 0.95
SAMM50-204ENST00000493161 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
SAMM50-204ENST00000493161 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
SAMM50-204ENST00000493161 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
SAMM50-204ENST00000493161 ZNF772Q68DY9 489 aaPredicted RBP21■□□□□ 0.95
SAMM50-204ENST00000493161 SETBP1Q9Y6X0 1596 aa21■□□□□ 0.95
SAMM50-204ENST00000493161 SPHKAPQ2M3C7 1700 aa20.99■□□□□ 0.95
SAMM50-204ENST00000493161 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
SAMM50-204ENST00000493161 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
SAMM50-204ENST00000493161 MST1RQ04912 1400 aa20.98■□□□□ 0.95
SAMM50-204ENST00000493161 DCCP43146 1447 aa20.97■□□□□ 0.95
SAMM50-204ENST00000493161 DDX17Q92841 729 aaKnown RBP20.97■□□□□ 0.95
SAMM50-204ENST00000493161 UPF1Q92900 1129 aaKnown RBP eCLIP20.97■□□□□ 0.95
SAMM50-204ENST00000493161 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
SAMM50-204ENST00000493161 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
SAMM50-204ENST00000493161 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
SAMM50-204ENST00000493161 RXRBP28702 533 aa20.93■□□□□ 0.94
SAMM50-204ENST00000493161 AFF2P51816 1311 aa20.93■□□□□ 0.94
SAMM50-204ENST00000493161 NEXMIFQ5QGS0 1516 aa20.93■□□□□ 0.94
SAMM50-204ENST00000493161 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
SAMM50-204ENST00000493161 NALCNQ8IZF0 1738 aa20.9■□□□□ 0.94
SAMM50-204ENST00000493161 LRRC59Q96AG4 307 aaKnown RBP20.89■□□□□ 0.93
SAMM50-204ENST00000493161 PNPLA6Q8IY17 1366 aa20.87■□□□□ 0.93
SAMM50-204ENST00000493161 C8orf37Q96NL8 207 aa20.86■□□□□ 0.93
SAMM50-204ENST00000493161 CDK12Q9NYV4 1490 aaPredicted RBP20.85■□□□□ 0.93
SAMM50-204ENST00000493161 C1orf167Q5SNV9 1468 aa20.84■□□□□ 0.93
SAMM50-204ENST00000493161 NAIPQ13075 1403 aa20.84■□□□□ 0.93
SAMM50-204ENST00000493161 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
SAMM50-204ENST00000493161 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.93
SAMM50-204ENST00000493161 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
SAMM50-204ENST00000493161 KIF1BO60333 1816 aa20.82■□□□□ 0.92
SAMM50-204ENST00000493161 RGS12O14924 1447 aa20.81■□□□□ 0.92
SAMM50-204ENST00000493161 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
SAMM50-204ENST00000493161 RRBP1Q9P2E9 1410 aaKnown RBP20.79■□□□□ 0.92
SAMM50-204ENST00000493161 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
SAMM50-204ENST00000493161 VGFO15240 615 aaPredicted RBP20.78■□□□□ 0.92
SAMM50-204ENST00000493161 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
SAMM50-204ENST00000493161 LAMC1P11047 1609 aa20.78■□□□□ 0.92
SAMM50-204ENST00000493161 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
SAMM50-204ENST00000493161 SOS2Q07890 1332 aaPredicted RBP20.77■□□□□ 0.91
SAMM50-204ENST00000493161 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
SAMM50-204ENST00000493161 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
SAMM50-204ENST00000493161 RPGRIP1LQ68CZ1 1315 aa20.72■□□□□ 0.91
SAMM50-204ENST00000493161 PPLO60437 1756 aa20.72■□□□□ 0.91
SAMM50-204ENST00000493161 FOXD1Q16676 465 aa20.71■□□□□ 0.91
SAMM50-204ENST00000493161 HFM1A2PYH4 1435 aa20.7■□□□□ 0.9
SAMM50-204ENST00000493161 USP21Q9UK80 565 aa20.7■□□□□ 0.9
SAMM50-204ENST00000493161 XPCQ01831 940 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms