RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
HMGN1-220ENST00000492280 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
HMGN1-220ENST00000492280 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
HMGN1-220ENST00000492280 ABCA6Q8N139 1617 aa16.64■□□□□ 0.25
HMGN1-220ENST00000492280 CD109Q6YHK3 1445 aa16.64■□□□□ 0.25
HMGN1-220ENST00000492280 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
HMGN1-220ENST00000492280 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
HMGN1-220ENST00000492280 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
HMGN1-220ENST00000492280 EFCAB6Q5THR3 1501 aa16.63■□□□□ 0.25
HMGN1-220ENST00000492280 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
HMGN1-220ENST00000492280 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-220ENST00000492280 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
HMGN1-220ENST00000492280 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
HMGN1-220ENST00000492280 NOS1P29475 1434 aa16.62■□□□□ 0.25
HMGN1-220ENST00000492280 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
HMGN1-220ENST00000492280 TRAK1Q9UPV9 953 aa16.61■□□□□ 0.25
HMGN1-220ENST00000492280 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
HMGN1-220ENST00000492280 MYOM1P52179 1685 aa16.61■□□□□ 0.25
HMGN1-220ENST00000492280 KIF1BO60333 1816 aa16.61■□□□□ 0.25
HMGN1-220ENST00000492280 FRMPD1Q5SYB0 1578 aa16.59■□□□□ 0.25
HMGN1-220ENST00000492280 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
HMGN1-220ENST00000492280 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
HMGN1-220ENST00000492280 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-220ENST00000492280 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
HMGN1-220ENST00000492280 NPATQ14207 1427 aa16.59■□□□□ 0.25
HMGN1-220ENST00000492280 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
HMGN1-220ENST00000492280 WASHC2CQ9Y4E1 1318 aa16.58■□□□□ 0.24
HMGN1-220ENST00000492280 BLMP54132 1417 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-220ENST00000492280 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
HMGN1-220ENST00000492280 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGN1-220ENST00000492280 WDR43Q15061 677 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGN1-220ENST00000492280 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
HMGN1-220ENST00000492280 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
HMGN1-220ENST00000492280 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
HMGN1-220ENST00000492280 SYNMO15061 1565 aa16.56■□□□□ 0.24
HMGN1-220ENST00000492280 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
HMGN1-220ENST00000492280 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
HMGN1-220ENST00000492280 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
HMGN1-220ENST00000492280 C20orf194Q5TEA3 1177 aa16.53■□□□□ 0.24
HMGN1-220ENST00000492280 HECW2Q9P2P5 1572 aa16.53■□□□□ 0.24
HMGN1-220ENST00000492280 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
HMGN1-220ENST00000492280 MYOM2P54296 1465 aa16.51■□□□□ 0.23
HMGN1-220ENST00000492280 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
HMGN1-220ENST00000492280 SIGLEC1Q9BZZ2 1709 aa16.51■□□□□ 0.23
HMGN1-220ENST00000492280 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
HMGN1-220ENST00000492280 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-220ENST00000492280 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
HMGN1-220ENST00000492280 ZMYM4Q5VZL5 1548 aa16.49■□□□□ 0.23
HMGN1-220ENST00000492280 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
HMGN1-220ENST00000492280 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
HMGN1-220ENST00000492280 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
HMGN1-220ENST00000492280 KIAA1210Q9ULL0 1709 aa16.49■□□□□ 0.23
HMGN1-220ENST00000492280 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
HMGN1-220ENST00000492280 APAF1O14727 1248 aa16.48■□□□□ 0.23
HMGN1-220ENST00000492280 ABCC3O15438 1527 aa16.48■□□□□ 0.23
HMGN1-220ENST00000492280 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
HMGN1-220ENST00000492280 STK26Q9P289 416 aa16.47■□□□□ 0.23
HMGN1-220ENST00000492280 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
HMGN1-220ENST00000492280 PPLO60437 1756 aa16.46■□□□□ 0.23
HMGN1-220ENST00000492280 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
HMGN1-220ENST00000492280 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
HMGN1-220ENST00000492280 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
HMGN1-220ENST00000492280 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
HMGN1-220ENST00000492280 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
HMGN1-220ENST00000492280 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
HMGN1-220ENST00000492280 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
HMGN1-220ENST00000492280 NRXN1Q9ULB1 1477 aa16.44■□□□□ 0.22
HMGN1-220ENST00000492280 CAMSAP1Q5T5Y3 1602 aa16.44■□□□□ 0.22
HMGN1-220ENST00000492280 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
HMGN1-220ENST00000492280 IDI1Q13907 227 aa16.43■□□□□ 0.22
HMGN1-220ENST00000492280 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
HMGN1-220ENST00000492280 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
HMGN1-220ENST00000492280 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
HMGN1-220ENST00000492280 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
HMGN1-220ENST00000492280 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
HMGN1-220ENST00000492280 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
HMGN1-220ENST00000492280 FBXO31Q5XUX0 539 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-220ENST00000492280 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
HMGN1-220ENST00000492280 MYO5BQ9ULV0 1848 aa16.41■□□□□ 0.22
HMGN1-220ENST00000492280 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
HMGN1-220ENST00000492280 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-220ENST00000492280 MYT1Q01538 1121 aa16.4■□□□□ 0.22
HMGN1-220ENST00000492280 FAM69CQ0P6D2 419 aa16.4■□□□□ 0.22
HMGN1-220ENST00000492280 TSPOAP1O95153 1857 aa16.4■□□□□ 0.22
HMGN1-220ENST00000492280 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
HMGN1-220ENST00000492280 MORC1Q86VD1 984 aa16.39■□□□□ 0.22
HMGN1-220ENST00000492280 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
HMGN1-220ENST00000492280 MLECQ14165 292 aa16.38■□□□□ 0.21
HMGN1-220ENST00000492280 GLI2P10070 1586 aa16.38■□□□□ 0.21
HMGN1-220ENST00000492280 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
HMGN1-220ENST00000492280 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
HMGN1-220ENST00000492280 BCAR3O75815 825 aa16.37■□□□□ 0.21
HMGN1-220ENST00000492280 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
HMGN1-220ENST00000492280 NEO1Q92859 1461 aa16.36■□□□□ 0.21
HMGN1-220ENST00000492280 NEXMIFQ5QGS0 1516 aa16.36■□□□□ 0.21
HMGN1-220ENST00000492280 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
HMGN1-220ENST00000492280 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-220ENST00000492280 NPC1L1Q9UHC9 1359 aa16.35■□□□□ 0.21
HMGN1-220ENST00000492280 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
HMGN1-220ENST00000492280 TULP4Q9NRJ4 1543 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms