RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
HDAC3-211ENST00000491581 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
HDAC3-211ENST00000491581 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
HDAC3-211ENST00000491581 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.21
HDAC3-211ENST00000491581 TOM1O60784 492 aa13.7□□□□□ -0.22
HDAC3-211ENST00000491581 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
HDAC3-211ENST00000491581 EID1Q9Y6B2 187 aa13.7□□□□□ -0.22
HDAC3-211ENST00000491581 ZFYVE9O95405 1425 aa13.7□□□□□ -0.22
HDAC3-211ENST00000491581 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
HDAC3-211ENST00000491581 RPRD2Q5VT52 1461 aaKnown RBP13.68□□□□□ -0.22
HDAC3-211ENST00000491581 RIMS2Q9UQ26 1411 aa13.68□□□□□ -0.22
HDAC3-211ENST00000491581 BCANQ96GW7 911 aa13.68□□□□□ -0.22
HDAC3-211ENST00000491581 NUP155O75694 1391 aa13.68□□□□□ -0.22
HDAC3-211ENST00000491581 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
HDAC3-211ENST00000491581 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
HDAC3-211ENST00000491581 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
HDAC3-211ENST00000491581 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
HDAC3-211ENST00000491581 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
HDAC3-211ENST00000491581 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
HDAC3-211ENST00000491581 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
HDAC3-211ENST00000491581 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
HDAC3-211ENST00000491581 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-211ENST00000491581 NRXN3Q9Y4C0 1643 aa13.63□□□□□ -0.23
HDAC3-211ENST00000491581 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
HDAC3-211ENST00000491581 KCNA6P17658 529 aa13.62□□□□□ -0.23
HDAC3-211ENST00000491581 NAIPQ13075 1403 aa13.62□□□□□ -0.23
HDAC3-211ENST00000491581 ADAMTS13Q76LX8 1427 aa13.62□□□□□ -0.23
HDAC3-211ENST00000491581 PLEKHG1Q9ULL1 1385 aa13.61□□□□□ -0.23
HDAC3-211ENST00000491581 PTPRUQ92729 1446 aa13.59□□□□□ -0.23
HDAC3-211ENST00000491581 SOCS7O14512 581 aa13.59□□□□□ -0.23
HDAC3-211ENST00000491581 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
HDAC3-211ENST00000491581 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.57□□□□□ -0.24
HDAC3-211ENST00000491581 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
HDAC3-211ENST00000491581 KIF1BO60333 1816 aa13.55□□□□□ -0.24
HDAC3-211ENST00000491581 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
HDAC3-211ENST00000491581 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
HDAC3-211ENST00000491581 RGS17Q9UGC6 210 aaPredicted RBP13.54□□□□□ -0.24
HDAC3-211ENST00000491581 TRPM2O94759 1503 aa13.54□□□□□ -0.24
HDAC3-211ENST00000491581 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
HDAC3-211ENST00000491581 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
HDAC3-211ENST00000491581 TBX22Q9Y458 520 aa13.52□□□□□ -0.25
HDAC3-211ENST00000491581 METP08581 1390 aa13.52□□□□□ -0.25
HDAC3-211ENST00000491581 MSH6P52701 1360 aa13.52□□□□□ -0.25
HDAC3-211ENST00000491581 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
HDAC3-211ENST00000491581 DIP2AQ14689 1571 aa13.52□□□□□ -0.25
HDAC3-211ENST00000491581 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.25
HDAC3-211ENST00000491581 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
HDAC3-211ENST00000491581 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
HDAC3-211ENST00000491581 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
HDAC3-211ENST00000491581 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
HDAC3-211ENST00000491581 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
HDAC3-211ENST00000491581 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
HDAC3-211ENST00000491581 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
HDAC3-211ENST00000491581 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
HDAC3-211ENST00000491581 PPLO60437 1756 aa13.49□□□□□ -0.25
HDAC3-211ENST00000491581 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
HDAC3-211ENST00000491581 DDX17Q92841 729 aaKnown RBP13.47□□□□□ -0.25
HDAC3-211ENST00000491581 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
HDAC3-211ENST00000491581 LRP6O75581 1613 aa13.46□□□□□ -0.26
HDAC3-211ENST00000491581 POTEAQ6S8J7 498 aa13.45□□□□□ -0.26
HDAC3-211ENST00000491581 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
HDAC3-211ENST00000491581 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
HDAC3-211ENST00000491581 MST1RQ04912 1400 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 ATF3P18847 181 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 C19orf44Q9H6X5 657 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
HDAC3-211ENST00000491581 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
HDAC3-211ENST00000491581 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
HDAC3-211ENST00000491581 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
HDAC3-211ENST00000491581 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
HDAC3-211ENST00000491581 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
HDAC3-211ENST00000491581 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
HDAC3-211ENST00000491581 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
HDAC3-211ENST00000491581 JCADQ9P266 1359 aa13.37□□□□□ -0.27
HDAC3-211ENST00000491581 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-211ENST00000491581 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-211ENST00000491581 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
HDAC3-211ENST00000491581 ADGRL3Q9HAR2 1447 aa13.37□□□□□ -0.27
HDAC3-211ENST00000491581 SPATA31E1Q6ZUB1 1445 aa13.36□□□□□ -0.27
HDAC3-211ENST00000491581 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
HDAC3-211ENST00000491581 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
HDAC3-211ENST00000491581 STK26Q9P289 416 aa13.34□□□□□ -0.27
HDAC3-211ENST00000491581 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.27
HDAC3-211ENST00000491581 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
HDAC3-211ENST00000491581 DCCP43146 1447 aa13.33□□□□□ -0.28
HDAC3-211ENST00000491581 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
HDAC3-211ENST00000491581 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
HDAC3-211ENST00000491581 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
HDAC3-211ENST00000491581 RGPD8O14715 1765 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-211ENST00000491581 SETD5Q9C0A6 1442 aa13.32□□□□□ -0.28
HDAC3-211ENST00000491581 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
HDAC3-211ENST00000491581 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
HDAC3-211ENST00000491581 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
HDAC3-211ENST00000491581 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
HDAC3-211ENST00000491581 XPCQ01831 940 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-211ENST00000491581 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
HDAC3-211ENST00000491581 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms