RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
CMSS1-206ENST00000491299 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
CMSS1-206ENST00000491299 MIA2Q96PC5 1412 aa13.34□□□□□ -0.27
CMSS1-206ENST00000491299 PLXNC1O60486 1568 aa13.33□□□□□ -0.28
CMSS1-206ENST00000491299 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.28
CMSS1-206ENST00000491299 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
CMSS1-206ENST00000491299 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
CMSS1-206ENST00000491299 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
CMSS1-206ENST00000491299 RGL2O15211 777 aa13.32□□□□□ -0.28
CMSS1-206ENST00000491299 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
CMSS1-206ENST00000491299 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
CMSS1-206ENST00000491299 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
CMSS1-206ENST00000491299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
CMSS1-206ENST00000491299 PLCG2P16885 1265 aa13.31□□□□□ -0.28
CMSS1-206ENST00000491299 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
CMSS1-206ENST00000491299 C3P01024 1663 aa13.31□□□□□ -0.28
CMSS1-206ENST00000491299 LMTK3Q96Q04 1460 aa13.3□□□□□ -0.28
CMSS1-206ENST00000491299 SETD1BQ9UPS6 1966 aaKnown RBP13.3□□□□□ -0.28
CMSS1-206ENST00000491299 MROH2AA6NES4 1674 aa13.3□□□□□ -0.28
CMSS1-206ENST00000491299 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
CMSS1-206ENST00000491299 PTPN23Q9H3S7 1636 aa13.28□□□□□ -0.28
CMSS1-206ENST00000491299 CEBPAP49715 358 aaPredicted RBP13.28□□□□□ -0.28
CMSS1-206ENST00000491299 GGT6Q6P531 493 aa13.28□□□□□ -0.28
CMSS1-206ENST00000491299 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
CMSS1-206ENST00000491299 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
CMSS1-206ENST00000491299 MAST1Q9Y2H9 1570 aa13.27□□□□□ -0.29
CMSS1-206ENST00000491299 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
CMSS1-206ENST00000491299 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
CMSS1-206ENST00000491299 CROCC2H7BZ55 1655 aa13.25□□□□□ -0.29
CMSS1-206ENST00000491299 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
CMSS1-206ENST00000491299 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
CMSS1-206ENST00000491299 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
CMSS1-206ENST00000491299 KIF3BO15066 747 aa13.24□□□□□ -0.29
CMSS1-206ENST00000491299 HSPA2P54652 639 aa13.23□□□□□ -0.29
CMSS1-206ENST00000491299 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
CMSS1-206ENST00000491299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
CMSS1-206ENST00000491299 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
CMSS1-206ENST00000491299 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
CMSS1-206ENST00000491299 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
CMSS1-206ENST00000491299 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
CMSS1-206ENST00000491299 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
CMSS1-206ENST00000491299 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
CMSS1-206ENST00000491299 KDM5DQ9BY66 1539 aa13.21□□□□□ -0.29
CMSS1-206ENST00000491299 TCOF1Q13428 1488 aaKnown RBP13.21□□□□□ -0.3
CMSS1-206ENST00000491299 NPATQ14207 1427 aa13.21□□□□□ -0.3
CMSS1-206ENST00000491299 STK25O00506 426 aa13.2□□□□□ -0.3
CMSS1-206ENST00000491299 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
CMSS1-206ENST00000491299 DAPK1P53355 1430 aa13.2□□□□□ -0.3
CMSS1-206ENST00000491299 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
CMSS1-206ENST00000491299 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
CMSS1-206ENST00000491299 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
CMSS1-206ENST00000491299 ZC3H13Q5T200 1668 aaKnown RBP13.18□□□□□ -0.3
CMSS1-206ENST00000491299 WASHC2CQ9Y4E1 1318 aa13.18□□□□□ -0.3
CMSS1-206ENST00000491299 RNF17Q9BXT8 1623 aaKnown RBP13.18□□□□□ -0.3
CMSS1-206ENST00000491299 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
CMSS1-206ENST00000491299 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
CMSS1-206ENST00000491299 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
CMSS1-206ENST00000491299 ABCC5O15440 1437 aa13.18□□□□□ -0.3
CMSS1-206ENST00000491299 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
CMSS1-206ENST00000491299 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
CMSS1-206ENST00000491299 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
CMSS1-206ENST00000491299 PTPRKQ15262 1439 aa13.15□□□□□ -0.3
CMSS1-206ENST00000491299 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
CMSS1-206ENST00000491299 ZNF142P52746 1687 aaPredicted RBP13.15□□□□□ -0.31
CMSS1-206ENST00000491299 RRP7BPQ9NSQ0 103 aa13.14□□□□□ -0.31
CMSS1-206ENST00000491299 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
CMSS1-206ENST00000491299 PZPP20742 1482 aa13.14□□□□□ -0.31
CMSS1-206ENST00000491299 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
CMSS1-206ENST00000491299 STRCQ7RTU9 1775 aa13.12□□□□□ -0.31
CMSS1-206ENST00000491299 CEP152O94986 1710 aa13.12□□□□□ -0.31
CMSS1-206ENST00000491299 KANK1Q14678 1352 aa13.11□□□□□ -0.31
CMSS1-206ENST00000491299 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
CMSS1-206ENST00000491299 ABCC3O15438 1527 aa13.11□□□□□ -0.31
CMSS1-206ENST00000491299 TNRQ92752 1358 aa13.1□□□□□ -0.31
CMSS1-206ENST00000491299 PRDM15P57071 1507 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-206ENST00000491299 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
CMSS1-206ENST00000491299 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
CMSS1-206ENST00000491299 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
CMSS1-206ENST00000491299 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
CMSS1-206ENST00000491299 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
CMSS1-206ENST00000491299 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
CMSS1-206ENST00000491299 A2ML1A8K2U0 1454 aa13.09□□□□□ -0.31
CMSS1-206ENST00000491299 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
CMSS1-206ENST00000491299 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
CMSS1-206ENST00000491299 SOX12O15370 315 aa13.07□□□□□ -0.32
CMSS1-206ENST00000491299 FBXO31Q5XUX0 539 aaPredicted RBP13.07□□□□□ -0.32
CMSS1-206ENST00000491299 PLA2R1Q13018 1463 aa13.07□□□□□ -0.32
CMSS1-206ENST00000491299 NLRP1Q9C000 1473 aa13.07□□□□□ -0.32
CMSS1-206ENST00000491299 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
CMSS1-206ENST00000491299 PTPRTO14522 1441 aa13.05□□□□□ -0.32
CMSS1-206ENST00000491299 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
CMSS1-206ENST00000491299 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
CMSS1-206ENST00000491299 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
CMSS1-206ENST00000491299 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
CMSS1-206ENST00000491299 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
CMSS1-206ENST00000491299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
CMSS1-206ENST00000491299 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
CMSS1-206ENST00000491299 G3V3G9 751 aa13.03□□□□□ -0.32
CMSS1-206ENST00000491299 CHGAP10645 457 aaKnown RBP13.03□□□□□ -0.32
CMSS1-206ENST00000491299 ITGAEP38570 1179 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms