RNA–Protein interactions for RNA: ENST00000489764.1

SLC6A9-208, Transcript of solute carrier family 6 member 9, humanhuman

TSL 3

Gene SLC6A9, Length 930 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-208ENST00000489764 RBM33Q96EV2 1170 aaKnown RBP28.47■■■□□ 2.15
SLC6A9-208ENST00000489764 HDGFP51858 240 aaKnown RBP28.46■■■□□ 2.15
SLC6A9-208ENST00000489764 XIRP1Q702N8 1843 aaKnown RBP28.46■■■□□ 2.15
SLC6A9-208ENST00000489764 MED1Q15648 1581 aaPredicted RBP28.45■■■□□ 2.15
SLC6A9-208ENST00000489764 NUP155O75694 1391 aa28.45■■■□□ 2.14
SLC6A9-208ENST00000489764 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
SLC6A9-208ENST00000489764 CHGAP10645 457 aaKnown RBP28.44■■■□□ 2.14
SLC6A9-208ENST00000489764 PLEKHG1Q9ULL1 1385 aa28.43■■■□□ 2.14
SLC6A9-208ENST00000489764 PPP1R15AO75807 674 aaPredicted RBP28.42■■■□□ 2.14
SLC6A9-208ENST00000489764 TMEM131LA2VDJ0 1609 aa28.41■■■□□ 2.14
SLC6A9-208ENST00000489764 GCC2Q8IWJ2 1684 aa28.41■■■□□ 2.14
SLC6A9-208ENST00000489764 FAM135BQ49AJ0 1406 aa28.39■■■□□ 2.14
SLC6A9-208ENST00000489764 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.39■■■□□ 2.14
SLC6A9-208ENST00000489764 E9PCH4 1651 aa28.38■■■□□ 2.13
SLC6A9-208ENST00000489764 NUTM2DQ5VT03 806 aaPredicted RBP28.38■■■□□ 2.13
SLC6A9-208ENST00000489764 TBX22Q9Y458 520 aa28.38■■■□□ 2.13
SLC6A9-208ENST00000489764 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
SLC6A9-208ENST00000489764 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
SLC6A9-208ENST00000489764 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
SLC6A9-208ENST00000489764 NWD1Q149M9 1564 aa28.33■■■□□ 2.13
SLC6A9-208ENST00000489764 PHF23Q9BUL5 403 aaPredicted RBP28.32■■■□□ 2.12
SLC6A9-208ENST00000489764 ADAMTS13Q76LX8 1427 aa28.29■■■□□ 2.12
SLC6A9-208ENST00000489764 MSH6P52701 1360 aa28.28■■■□□ 2.12
SLC6A9-208ENST00000489764 SLAIN2Q9P270 581 aa28.28■■■□□ 2.12
SLC6A9-208ENST00000489764 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.12
SLC6A9-208ENST00000489764 CHD2O14647 1828 aaKnown RBP28.25■■■□□ 2.11
SLC6A9-208ENST00000489764 RGS17Q9UGC6 210 aaPredicted RBP28.22■■■□□ 2.11
SLC6A9-208ENST00000489764 PIK3R4Q99570 1358 aa28.21■■■□□ 2.11
SLC6A9-208ENST00000489764 NCOA3Q9Y6Q9 1424 aa28.2■■■□□ 2.11
SLC6A9-208ENST00000489764 ROBO1Q9Y6N7 1651 aa28.19■■■□□ 2.1
SLC6A9-208ENST00000489764 NAIPQ13075 1403 aa28.19■■■□□ 2.1
SLC6A9-208ENST00000489764 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
SLC6A9-208ENST00000489764 ZNF326Q5BKZ1 582 aaKnown RBP28.16■■■□□ 2.1
SLC6A9-208ENST00000489764 C14orf37Q86TY3 774 aa28.16■■■□□ 2.1
SLC6A9-208ENST00000489764 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
SLC6A9-208ENST00000489764 PTPRUQ92729 1446 aa28.16■■■□□ 2.1
SLC6A9-208ENST00000489764 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
SLC6A9-208ENST00000489764 CADPS2Q86UW7 1296 aa28.11■■■□□ 2.09
SLC6A9-208ENST00000489764 SPHKAPQ2M3C7 1700 aa28.11■■■□□ 2.09
SLC6A9-208ENST00000489764 TRPM2O94759 1503 aa28.1■■■□□ 2.09
SLC6A9-208ENST00000489764 ATF3P18847 181 aa28.1■■■□□ 2.09
SLC6A9-208ENST00000489764 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
SLC6A9-208ENST00000489764 METP08581 1390 aa28.07■■■□□ 2.08
SLC6A9-208ENST00000489764 HFM1A2PYH4 1435 aa28.05■■■□□ 2.08
SLC6A9-208ENST00000489764 NRXN3Q9Y4C0 1643 aa28.05■■■□□ 2.08
SLC6A9-208ENST00000489764 SETBP1Q9Y6X0 1596 aa28.05■■■□□ 2.08
SLC6A9-208ENST00000489764 CLTCL1P53675 1640 aa28.04■■■□□ 2.08
SLC6A9-208ENST00000489764 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
SLC6A9-208ENST00000489764 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.04■■■□□ 2.08
SLC6A9-208ENST00000489764 JCADQ9P266 1359 aa28.03■■■□□ 2.08
SLC6A9-208ENST00000489764 PHLPP1O60346 1717 aa28.01■■■□□ 2.07
SLC6A9-208ENST00000489764 SLC4A1APQ9BWU0 796 aaKnown RBP28.01■■■□□ 2.07
SLC6A9-208ENST00000489764 NEXMIFQ5QGS0 1516 aa27.99■■■□□ 2.07
SLC6A9-208ENST00000489764 BRINP3Q76B58 766 aa27.98■■■□□ 2.07
SLC6A9-208ENST00000489764 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
SLC6A9-208ENST00000489764 VGFO15240 615 aaPredicted RBP27.96■■■□□ 2.07
SLC6A9-208ENST00000489764 COL16A1Q07092 1604 aaPredicted RBP27.96■■■□□ 2.07
SLC6A9-208ENST00000489764 DCCP43146 1447 aa27.93■■■□□ 2.06
SLC6A9-208ENST00000489764 FOXD1Q16676 465 aa27.92■■■□□ 2.06
SLC6A9-208ENST00000489764 RPGRIP1LQ68CZ1 1315 aa27.92■■■□□ 2.06
SLC6A9-208ENST00000489764 AHDC1Q5TGY3 1603 aaPredicted RBP27.91■■■□□ 2.06
SLC6A9-208ENST00000489764 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
SLC6A9-208ENST00000489764 KIF1BO60333 1816 aa27.9■■■□□ 2.06
SLC6A9-208ENST00000489764 MST1RQ04912 1400 aa27.89■■■□□ 2.06
SLC6A9-208ENST00000489764 LRP6O75581 1613 aa27.85■■■□□ 2.05
SLC6A9-208ENST00000489764 ADGRL3Q9HAR2 1447 aa27.85■■■□□ 2.05
SLC6A9-208ENST00000489764 MPHOSPH9Q99550 1183 aa27.83■■■□□ 2.05
SLC6A9-208ENST00000489764 ASXL1Q8IXJ9 1541 aa27.82■■■□□ 2.04
SLC6A9-208ENST00000489764 MEX3CQ5U5Q3 659 aaKnown RBP27.82■■■□□ 2.04
SLC6A9-208ENST00000489764 DDX17Q92841 729 aaKnown RBP27.82■■■□□ 2.04
SLC6A9-208ENST00000489764 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
SLC6A9-208ENST00000489764 SETD5Q9C0A6 1442 aa27.79■■■□□ 2.04
SLC6A9-208ENST00000489764 LRRC59Q96AG4 307 aaKnown RBP27.79■■■□□ 2.04
SLC6A9-208ENST00000489764 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
SLC6A9-208ENST00000489764 NUTM2BA6NNL0 878 aaPredicted RBP27.78■■■□□ 2.04
SLC6A9-208ENST00000489764 NUTM2EB1AL46 878 aaPredicted RBP27.78■■■□□ 2.04
SLC6A9-208ENST00000489764 NUTM2AQ8IVF1 878 aaPredicted RBP27.78■■■□□ 2.04
SLC6A9-208ENST00000489764 RGL3Q3MIN7 710 aa27.77■■■□□ 2.04
SLC6A9-208ENST00000489764 SHPRHQ149N8 1683 aa27.77■■■□□ 2.04
SLC6A9-208ENST00000489764 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
SLC6A9-208ENST00000489764 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
SLC6A9-208ENST00000489764 ZNF772Q68DY9 489 aaPredicted RBP27.76■■■□□ 2.03
SLC6A9-208ENST00000489764 C1orf167Q5SNV9 1468 aa27.75■■■□□ 2.03
SLC6A9-208ENST00000489764 NALCNQ8IZF0 1738 aa27.74■■■□□ 2.03
SLC6A9-208ENST00000489764 CCDC144AA2RUR9 1427 aa27.74■■■□□ 2.03
SLC6A9-208ENST00000489764 PRAG1Q86YV5 1406 aa27.74■■■□□ 2.03
SLC6A9-208ENST00000489764 ORAI2Q96SN7 254 aa27.73■■■□□ 2.03
SLC6A9-208ENST00000489764 SPATA31E1Q6ZUB1 1445 aa27.73■■■□□ 2.03
SLC6A9-208ENST00000489764 PPLO60437 1756 aa27.73■■■□□ 2.03
SLC6A9-208ENST00000489764 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.03
SLC6A9-208ENST00000489764 PNPLA6Q8IY17 1366 aa27.67■■■□□ 2.02
SLC6A9-208ENST00000489764 ANKRD30BQ9BXX2 1392 aa27.67■■■□□ 2.02
SLC6A9-208ENST00000489764 STK26Q9P289 416 aa27.66■■■□□ 2.02
SLC6A9-208ENST00000489764 SOS2Q07890 1332 aaPredicted RBP27.65■■■□□ 2.02
SLC6A9-208ENST00000489764 TMEM132EQ6IEE7 984 aa27.64■■■□□ 2.02
SLC6A9-208ENST00000489764 WAPLQ7Z5K2 1190 aa27.64■■■□□ 2.02
SLC6A9-208ENST00000489764 AFF2P51816 1311 aa27.64■■■□□ 2.01
SLC6A9-208ENST00000489764 ACIN1Q9UKV3 1341 aaKnown RBP27.64■■■□□ 2.01
SLC6A9-208ENST00000489764 RXRBP28702 533 aa27.63■■■□□ 2.01
SLC6A9-208ENST00000489764 C8orf37Q96NL8 207 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms