RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 NEXMIFQ5QGS0 1516 aa23.37■■□□□ 1.33
CLIC4-203ENST00000489758 RPGRIP1LQ68CZ1 1315 aa23.36■■□□□ 1.33
CLIC4-203ENST00000489758 LTKP29376 864 aa23.35■■□□□ 1.33
CLIC4-203ENST00000489758 MYO5BQ9ULV0 1848 aa23.35■■□□□ 1.33
CLIC4-203ENST00000489758 SCAF11Q99590 1463 aaKnown RBP23.32■■□□□ 1.32
CLIC4-203ENST00000489758 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
CLIC4-203ENST00000489758 ANKLE2Q86XL3 938 aa23.31■■□□□ 1.32
CLIC4-203ENST00000489758 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
CLIC4-203ENST00000489758 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
CLIC4-203ENST00000489758 NUTM2DQ5VT03 806 aaPredicted RBP23.3■■□□□ 1.32
CLIC4-203ENST00000489758 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
CLIC4-203ENST00000489758 NCKAP5LQ9HCH0 1330 aa23.3■■□□□ 1.32
CLIC4-203ENST00000489758 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
CLIC4-203ENST00000489758 MYOM2P54296 1465 aa23.28■■□□□ 1.32
CLIC4-203ENST00000489758 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
CLIC4-203ENST00000489758 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
CLIC4-203ENST00000489758 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
CLIC4-203ENST00000489758 MED14O60244 1454 aa23.27■■□□□ 1.32
CLIC4-203ENST00000489758 PPLO60437 1756 aa23.27■■□□□ 1.32
CLIC4-203ENST00000489758 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
CLIC4-203ENST00000489758 VGFO15240 615 aaPredicted RBP23.26■■□□□ 1.31
CLIC4-203ENST00000489758 ADGRF5Q8IZF2 1346 aa23.26■■□□□ 1.31
CLIC4-203ENST00000489758 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
CLIC4-203ENST00000489758 PPP1R15AO75807 674 aaPredicted RBP23.25■■□□□ 1.31
CLIC4-203ENST00000489758 STRCQ7RTU9 1775 aa23.23■■□□□ 1.31
CLIC4-203ENST00000489758 STAC3Q96MF2 364 aa23.23■■□□□ 1.31
CLIC4-203ENST00000489758 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
CLIC4-203ENST00000489758 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
CLIC4-203ENST00000489758 NPHP4O75161 1426 aaPredicted RBP23.23■■□□□ 1.31
CLIC4-203ENST00000489758 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
CLIC4-203ENST00000489758 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
CLIC4-203ENST00000489758 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
CLIC4-203ENST00000489758 POLR1AO95602 1720 aaPredicted RBP23.21■■□□□ 1.31
CLIC4-203ENST00000489758 SETBP1Q9Y6X0 1596 aa23.2■■□□□ 1.3
CLIC4-203ENST00000489758 ADAMTS13Q76LX8 1427 aa23.18■■□□□ 1.3
CLIC4-203ENST00000489758 PRAG1Q86YV5 1406 aa23.18■■□□□ 1.3
CLIC4-203ENST00000489758 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
CLIC4-203ENST00000489758 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
CLIC4-203ENST00000489758 IQGAP1P46940 1657 aa23.15■■□□□ 1.3
CLIC4-203ENST00000489758 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
CLIC4-203ENST00000489758 NBPF8Q3BBV2 869 aa23.12■■□□□ 1.29
CLIC4-203ENST00000489758 BCANQ96GW7 911 aa23.12■■□□□ 1.29
CLIC4-203ENST00000489758 C14orf93Q9H972 538 aaKnown RBP23.12■■□□□ 1.29
CLIC4-203ENST00000489758 TBX22Q9Y458 520 aa23.12■■□□□ 1.29
CLIC4-203ENST00000489758 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
CLIC4-203ENST00000489758 DIP2AQ14689 1571 aa23.11■■□□□ 1.29
CLIC4-203ENST00000489758 CFAP70Q5T0N1 1121 aa23.1■■□□□ 1.29
CLIC4-203ENST00000489758 METP08581 1390 aa23.09■■□□□ 1.29
CLIC4-203ENST00000489758 SETD1AO15047 1707 aaKnown RBP23.07■■□□□ 1.28
CLIC4-203ENST00000489758 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
CLIC4-203ENST00000489758 LAMC1P11047 1609 aa23.05■■□□□ 1.28
CLIC4-203ENST00000489758 ADGRB1O14514 1584 aa23.05■■□□□ 1.28
CLIC4-203ENST00000489758 PIK3R4Q99570 1358 aa23.03■■□□□ 1.28
CLIC4-203ENST00000489758 PTPRUQ92729 1446 aa23.03■■□□□ 1.28
CLIC4-203ENST00000489758 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
CLIC4-203ENST00000489758 TRPM1Q7Z4N2 1603 aa23.02■■□□□ 1.28
CLIC4-203ENST00000489758 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
CLIC4-203ENST00000489758 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
CLIC4-203ENST00000489758 KIAA1210Q9ULL0 1709 aa23.02■■□□□ 1.28
CLIC4-203ENST00000489758 GPRASP1Q5JY77 1395 aa22.99■■□□□ 1.27
CLIC4-203ENST00000489758 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
CLIC4-203ENST00000489758 LRPPRCP42704 1394 aaKnown RBP22.98■■□□□ 1.27
CLIC4-203ENST00000489758 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
CLIC4-203ENST00000489758 KCNA6P17658 529 aa22.97■■□□□ 1.27
CLIC4-203ENST00000489758 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
CLIC4-203ENST00000489758 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
CLIC4-203ENST00000489758 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
CLIC4-203ENST00000489758 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
CLIC4-203ENST00000489758 TECPR2O15040 1411 aa22.94■■□□□ 1.26
CLIC4-203ENST00000489758 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
CLIC4-203ENST00000489758 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
CLIC4-203ENST00000489758 STK26Q9P289 416 aa22.92■■□□□ 1.26
CLIC4-203ENST00000489758 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
CLIC4-203ENST00000489758 NKTRP30414 1462 aaKnown RBP22.91■■□□□ 1.26
CLIC4-203ENST00000489758 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
CLIC4-203ENST00000489758 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
CLIC4-203ENST00000489758 STRCP1A6NGW2 1772 aa22.9■■□□□ 1.26
CLIC4-203ENST00000489758 LTBP4Q8N2S1 1624 aa22.9■■□□□ 1.26
CLIC4-203ENST00000489758 CPS1P31327 1500 aa22.89■■□□□ 1.26
CLIC4-203ENST00000489758 CARD11Q9BXL7 1154 aa22.89■■□□□ 1.25
CLIC4-203ENST00000489758 DLC1Q96QB1 1528 aa22.88■■□□□ 1.25
CLIC4-203ENST00000489758 TRAK1Q9UPV9 953 aa22.88■■□□□ 1.25
CLIC4-203ENST00000489758 SIRT1Q96EB6 747 aa22.87■■□□□ 1.25
CLIC4-203ENST00000489758 KNDC1Q76NI1 1749 aa22.87■■□□□ 1.25
CLIC4-203ENST00000489758 FAM135BQ49AJ0 1406 aa22.86■■□□□ 1.25
CLIC4-203ENST00000489758 LRRC7Q96NW7 1537 aa22.84■■□□□ 1.25
CLIC4-203ENST00000489758 PLEKHH1Q9ULM0 1364 aa22.84■■□□□ 1.25
CLIC4-203ENST00000489758 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
CLIC4-203ENST00000489758 WAPLQ7Z5K2 1190 aa22.82■■□□□ 1.24
CLIC4-203ENST00000489758 PROSER2Q86WR7 435 aaPredicted RBP22.82■■□□□ 1.24
CLIC4-203ENST00000489758 PRAM1Q96QH2 718 aa22.82■■□□□ 1.24
CLIC4-203ENST00000489758 TMEM94Q12767 1356 aa22.81■■□□□ 1.24
CLIC4-203ENST00000489758 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
CLIC4-203ENST00000489758 ARHGEF28Q8N1W1 1705 aaKnown RBP22.79■■□□□ 1.24
CLIC4-203ENST00000489758 USP47Q96K76 1375 aa22.79■■□□□ 1.24
CLIC4-203ENST00000489758 NCOA3Q9Y6Q9 1424 aa22.78■■□□□ 1.24
CLIC4-203ENST00000489758 EIF3AQ14152 1382 aaKnown RBP22.77■■□□□ 1.24
CLIC4-203ENST00000489758 POGKQ9P215 609 aa22.76■■□□□ 1.23
CLIC4-203ENST00000489758 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
CLIC4-203ENST00000489758 SAFB2Q14151 953 aaKnown RBP eCLIP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms