RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MAP3K1Q13233 1512 aa14.98□□□□□ -0.01
SSBP1-212ENST00000489378 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
SSBP1-212ENST00000489378 PHLPP1O60346 1717 aa14.96□□□□□ -0.01
SSBP1-212ENST00000489378 JCADQ9P266 1359 aa14.96□□□□□ -0.01
SSBP1-212ENST00000489378 CAMSAP2Q08AD1 1489 aa14.96□□□□□ -0.01
SSBP1-212ENST00000489378 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
SSBP1-212ENST00000489378 LRP6O75581 1613 aa14.94□□□□□ -0.02
SSBP1-212ENST00000489378 KCNA6P17658 529 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 PROSER2Q86WR7 435 aaPredicted RBP14.93□□□□□ -0.02
SSBP1-212ENST00000489378 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 CEP152O94986 1710 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 MROH1Q8NDA8 1641 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 EHBP1L1Q8N3D4 1523 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
SSBP1-212ENST00000489378 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
SSBP1-212ENST00000489378 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
SSBP1-212ENST00000489378 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
SSBP1-212ENST00000489378 ARHGEF5Q12774 1597 aa14.9□□□□□ -0.02
SSBP1-212ENST00000489378 ZNF772Q68DY9 489 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-212ENST00000489378 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
SSBP1-212ENST00000489378 SLAIN2Q9P270 581 aa14.9□□□□□ -0.02
SSBP1-212ENST00000489378 COL16A1Q07092 1604 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-212ENST00000489378 PRDM15P57071 1507 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-212ENST00000489378 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
SSBP1-212ENST00000489378 TSPY4P0CV99 314 aa14.89□□□□□ -0.03
SSBP1-212ENST00000489378 TSPY10P0CW01 314 aa14.89□□□□□ -0.03
SSBP1-212ENST00000489378 MEX3CQ5U5Q3 659 aaKnown RBP14.88□□□□□ -0.03
SSBP1-212ENST00000489378 EIF2AK4Q9P2K8 1649 aaKnown RBP14.88□□□□□ -0.03
SSBP1-212ENST00000489378 TET3O43151 1660 aa14.87□□□□□ -0.03
SSBP1-212ENST00000489378 MSH6P52701 1360 aa14.87□□□□□ -0.03
SSBP1-212ENST00000489378 RXRBP28702 533 aa14.86□□□□□ -0.03
SSBP1-212ENST00000489378 SPATA31A6Q5VVP1 1343 aa14.86□□□□□ -0.03
SSBP1-212ENST00000489378 NKTRP30414 1462 aaKnown RBP14.86□□□□□ -0.03
SSBP1-212ENST00000489378 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
SSBP1-212ENST00000489378 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
SSBP1-212ENST00000489378 MAST1Q9Y2H9 1570 aa14.84□□□□□ -0.03
SSBP1-212ENST00000489378 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.03
SSBP1-212ENST00000489378 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.03
SSBP1-212ENST00000489378 FGD6Q6ZV73 1430 aa14.83□□□□□ -0.03
SSBP1-212ENST00000489378 EFCAB6Q5THR3 1501 aa14.83□□□□□ -0.04
SSBP1-212ENST00000489378 CDK12Q9NYV4 1490 aaPredicted RBP14.83□□□□□ -0.04
SSBP1-212ENST00000489378 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
SSBP1-212ENST00000489378 KDM5AP29375 1690 aaKnown RBP14.81□□□□□ -0.04
SSBP1-212ENST00000489378 SHPRHQ149N8 1683 aa14.81□□□□□ -0.04
SSBP1-212ENST00000489378 IDI1Q13907 227 aa14.8□□□□□ -0.04
SSBP1-212ENST00000489378 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-212ENST00000489378 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-212ENST00000489378 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-212ENST00000489378 AHDC1Q5TGY3 1603 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-212ENST00000489378 DUOX2Q9NRD8 1548 aa14.77□□□□□ -0.04
SSBP1-212ENST00000489378 RGS12O14924 1447 aa14.77□□□□□ -0.04
SSBP1-212ENST00000489378 AFF2P51816 1311 aa14.77□□□□□ -0.05
SSBP1-212ENST00000489378 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
SSBP1-212ENST00000489378 BCANQ96GW7 911 aa14.76□□□□□ -0.05
SSBP1-212ENST00000489378 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
SSBP1-212ENST00000489378 DIP2AQ14689 1571 aa14.75□□□□□ -0.05
SSBP1-212ENST00000489378 ADGRB3O60242 1522 aa14.73□□□□□ -0.05
SSBP1-212ENST00000489378 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
SSBP1-212ENST00000489378 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-212ENST00000489378 CLEC11AQ9Y240 323 aa14.72□□□□□ -0.05
SSBP1-212ENST00000489378 KIF15Q9NS87 1388 aa14.72□□□□□ -0.05
SSBP1-212ENST00000489378 NUTM2DQ5VT03 806 aaPredicted RBP14.71□□□□□ -0.05
SSBP1-212ENST00000489378 ERBINQ96RT1 1412 aa14.71□□□□□ -0.06
SSBP1-212ENST00000489378 NCOA3Q9Y6Q9 1424 aa14.71□□□□□ -0.06
SSBP1-212ENST00000489378 HAX1O00165 279 aa14.7□□□□□ -0.06
SSBP1-212ENST00000489378 RBM6P78332 1123 aaKnown RBP14.7□□□□□ -0.06
SSBP1-212ENST00000489378 BRINP3Q76B58 766 aa14.7□□□□□ -0.06
SSBP1-212ENST00000489378 CADPS2Q86UW7 1296 aa14.7□□□□□ -0.06
SSBP1-212ENST00000489378 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
SSBP1-212ENST00000489378 NOS1P29475 1434 aa14.7□□□□□ -0.06
SSBP1-212ENST00000489378 SETBP1Q9Y6X0 1596 aa14.7□□□□□ -0.06
SSBP1-212ENST00000489378 PLEKHG1Q9ULL1 1385 aa14.69□□□□□ -0.06
SSBP1-212ENST00000489378 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
SSBP1-212ENST00000489378 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
SSBP1-212ENST00000489378 ATF3P18847 181 aa14.68□□□□□ -0.06
SSBP1-212ENST00000489378 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
SSBP1-212ENST00000489378 LMTK2Q8IWU2 1503 aa14.68□□□□□ -0.06
SSBP1-212ENST00000489378 KANK1Q14678 1352 aa14.68□□□□□ -0.06
SSBP1-212ENST00000489378 C8orf37Q96NL8 207 aa14.67□□□□□ -0.06
SSBP1-212ENST00000489378 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
SSBP1-212ENST00000489378 MYO5BQ9ULV0 1848 aa14.67□□□□□ -0.06
SSBP1-212ENST00000489378 EVX2Q03828 476 aa14.66□□□□□ -0.06
SSBP1-212ENST00000489378 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
SSBP1-212ENST00000489378 TBX22Q9Y458 520 aa14.66□□□□□ -0.06
SSBP1-212ENST00000489378 ATAD2Q6PL18 1390 aa14.65□□□□□ -0.06
SSBP1-212ENST00000489378 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
SSBP1-212ENST00000489378 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
SSBP1-212ENST00000489378 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
SSBP1-212ENST00000489378 PRKAR2AP13861 404 aaKnown RBP14.65□□□□□ -0.06
SSBP1-212ENST00000489378 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
SSBP1-212ENST00000489378 ASXL1Q8IXJ9 1541 aa14.64□□□□□ -0.07
SSBP1-212ENST00000489378 ABCC5O15440 1437 aa14.63□□□□□ -0.07
SSBP1-212ENST00000489378 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
SSBP1-212ENST00000489378 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
SSBP1-212ENST00000489378 EP400Q96L91 3159 aa14.62□□□□□ -0.07
SSBP1-212ENST00000489378 NHSL1Q5SYE7 1610 aa14.62□□□□□ -0.07
SSBP1-212ENST00000489378 NGLY1Q96IV0 654 aa14.61□□□□□ -0.07
SSBP1-212ENST00000489378 PNPLA6Q8IY17 1366 aa14.61□□□□□ -0.07
SSBP1-212ENST00000489378 GCC2Q8IWJ2 1684 aa14.61□□□□□ -0.07
SSBP1-212ENST00000489378 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms