RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
PHF1-210ENST00000488767 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
PHF1-210ENST00000488767 ZFYVE9O95405 1425 aa19■□□□□ 0.63
PHF1-210ENST00000488767 CLTCL1P53675 1640 aa19■□□□□ 0.63
PHF1-210ENST00000488767 FOXD1Q16676 465 aa19■□□□□ 0.63
PHF1-210ENST00000488767 FBXO41Q8TF61 875 aa19■□□□□ 0.63
PHF1-210ENST00000488767 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
PHF1-210ENST00000488767 CPS1P31327 1500 aa19■□□□□ 0.63
PHF1-210ENST00000488767 IQSEC2Q5JU85 1478 aa18.99■□□□□ 0.63
PHF1-210ENST00000488767 PLEKHG1Q9ULL1 1385 aa18.99■□□□□ 0.63
PHF1-210ENST00000488767 MYO5BQ9ULV0 1848 aa18.99■□□□□ 0.63
PHF1-210ENST00000488767 KIF1BO60333 1816 aa18.97■□□□□ 0.63
PHF1-210ENST00000488767 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
PHF1-210ENST00000488767 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
PHF1-210ENST00000488767 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
PHF1-210ENST00000488767 TRIM26Q12899 539 aaPredicted RBP18.93■□□□□ 0.62
PHF1-210ENST00000488767 ILDR1Q86SU0 546 aaPredicted RBP18.92■□□□□ 0.62
PHF1-210ENST00000488767 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
PHF1-210ENST00000488767 VGFO15240 615 aaPredicted RBP18.91■□□□□ 0.62
PHF1-210ENST00000488767 DIP2AQ14689 1571 aa18.9■□□□□ 0.62
PHF1-210ENST00000488767 KCNA6P17658 529 aa18.9■□□□□ 0.62
PHF1-210ENST00000488767 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
PHF1-210ENST00000488767 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
PHF1-210ENST00000488767 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
PHF1-210ENST00000488767 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
PHF1-210ENST00000488767 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
PHF1-210ENST00000488767 TOM1O60784 492 aa18.85■□□□□ 0.61
PHF1-210ENST00000488767 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
PHF1-210ENST00000488767 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
PHF1-210ENST00000488767 NKTRP30414 1462 aaKnown RBP18.84■□□□□ 0.61
PHF1-210ENST00000488767 ADAMTS13Q76LX8 1427 aa18.84■□□□□ 0.61
PHF1-210ENST00000488767 ANKRD30BQ9BXX2 1392 aa18.84■□□□□ 0.61
PHF1-210ENST00000488767 PROSER2Q86WR7 435 aaPredicted RBP18.83■□□□□ 0.6
PHF1-210ENST00000488767 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.6
PHF1-210ENST00000488767 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
PHF1-210ENST00000488767 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
PHF1-210ENST00000488767 PPLO60437 1756 aa18.79■□□□□ 0.6
PHF1-210ENST00000488767 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
PHF1-210ENST00000488767 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
PHF1-210ENST00000488767 C14orf37Q86TY3 774 aa18.77■□□□□ 0.6
PHF1-210ENST00000488767 AMOTL2Q9Y2J4 779 aa18.77■□□□□ 0.6
PHF1-210ENST00000488767 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
PHF1-210ENST00000488767 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.59
PHF1-210ENST00000488767 MSH6P52701 1360 aa18.76■□□□□ 0.59
PHF1-210ENST00000488767 PIP4K2BP78356 416 aa18.75■□□□□ 0.59
PHF1-210ENST00000488767 METP08581 1390 aa18.74■□□□□ 0.59
PHF1-210ENST00000488767 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
PHF1-210ENST00000488767 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
PHF1-210ENST00000488767 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
PHF1-210ENST00000488767 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
PHF1-210ENST00000488767 IFT172Q9UG01 1749 aa18.72■□□□□ 0.59
PHF1-210ENST00000488767 MYOM2P54296 1465 aa18.71■□□□□ 0.59
PHF1-210ENST00000488767 RBM33Q96EV2 1170 aaKnown RBP18.71■□□□□ 0.59
PHF1-210ENST00000488767 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
PHF1-210ENST00000488767 PTPRUQ92729 1446 aa18.7■□□□□ 0.58
PHF1-210ENST00000488767 PIK3C2GO75747 1445 aa18.69■□□□□ 0.58
PHF1-210ENST00000488767 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
PHF1-210ENST00000488767 ATF3P18847 181 aa18.67■□□□□ 0.58
PHF1-210ENST00000488767 C19orf44Q9H6X5 657 aa18.67■□□□□ 0.58
PHF1-210ENST00000488767 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
PHF1-210ENST00000488767 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
PHF1-210ENST00000488767 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
PHF1-210ENST00000488767 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
PHF1-210ENST00000488767 LAMC1P11047 1609 aa18.65■□□□□ 0.58
PHF1-210ENST00000488767 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
PHF1-210ENST00000488767 SETD1AO15047 1707 aaKnown RBP18.64■□□□□ 0.57
PHF1-210ENST00000488767 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
PHF1-210ENST00000488767 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
PHF1-210ENST00000488767 STK26Q9P289 416 aa18.62■□□□□ 0.57
PHF1-210ENST00000488767 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
PHF1-210ENST00000488767 DCCP43146 1447 aa18.61■□□□□ 0.57
PHF1-210ENST00000488767 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
PHF1-210ENST00000488767 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
PHF1-210ENST00000488767 SLAIN2Q9P270 581 aa18.61■□□□□ 0.57
PHF1-210ENST00000488767 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
PHF1-210ENST00000488767 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
PHF1-210ENST00000488767 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
PHF1-210ENST00000488767 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
PHF1-210ENST00000488767 ROBO2Q9HCK4 1378 aa18.59■□□□□ 0.57
PHF1-210ENST00000488767 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
PHF1-210ENST00000488767 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
PHF1-210ENST00000488767 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
PHF1-210ENST00000488767 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
PHF1-210ENST00000488767 TECPR2O15040 1411 aa18.57■□□□□ 0.56
PHF1-210ENST00000488767 HSPA1LP34931 641 aa18.56■□□□□ 0.56
PHF1-210ENST00000488767 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
PHF1-210ENST00000488767 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
PHF1-210ENST00000488767 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
PHF1-210ENST00000488767 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
PHF1-210ENST00000488767 POGKQ9P215 609 aa18.53■□□□□ 0.56
PHF1-210ENST00000488767 ROBO1Q9Y6N7 1651 aa18.53■□□□□ 0.56
PHF1-210ENST00000488767 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
PHF1-210ENST00000488767 NALCNQ8IZF0 1738 aa18.52■□□□□ 0.55
PHF1-210ENST00000488767 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
PHF1-210ENST00000488767 TONSLQ96HA7 1378 aa18.51■□□□□ 0.55
PHF1-210ENST00000488767 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
PHF1-210ENST00000488767 PRAM1Q96QH2 718 aa18.49■□□□□ 0.55
PHF1-210ENST00000488767 TRAK1Q9UPV9 953 aa18.49■□□□□ 0.55
PHF1-210ENST00000488767 ADGRB1O14514 1584 aa18.49■□□□□ 0.55
PHF1-210ENST00000488767 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms