RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
NECAB3-213ENST00000488489 IDI1Q13907 227 aa28.14■■■□□ 2.1
NECAB3-213ENST00000488489 ANP32CO43423 234 aa28.13■■■□□ 2.09
NECAB3-213ENST00000488489 CLTCQ00610 1675 aaKnown RBP28.13■■■□□ 2.09
NECAB3-213ENST00000488489 ARID4BQ4LE39 1312 aaPredicted RBP28.11■■■□□ 2.09
NECAB3-213ENST00000488489 NRXN1Q9ULB1 1477 aa28.1■■■□□ 2.09
NECAB3-213ENST00000488489 SLC52A1Q9NWF4 448 aa28.1■■■□□ 2.09
NECAB3-213ENST00000488489 PPLO60437 1756 aa28.09■■■□□ 2.09
NECAB3-213ENST00000488489 KIAA1210Q9ULL0 1709 aa28.08■■■□□ 2.09
NECAB3-213ENST00000488489 ERVK-7P63135 1459 aa28.07■■■□□ 2.08
NECAB3-213ENST00000488489 CFAP70Q5T0N1 1121 aa28.07■■■□□ 2.08
NECAB3-213ENST00000488489 POLR3GLQ9BT43 218 aa28.07■■■□□ 2.08
NECAB3-213ENST00000488489 TESK2Q96S53 571 aa28.06■■■□□ 2.08
NECAB3-213ENST00000488489 RPGRIP1LQ68CZ1 1315 aa28.05■■■□□ 2.08
NECAB3-213ENST00000488489 IQGAP1P46940 1657 aa28.04■■■□□ 2.08
NECAB3-213ENST00000488489 SCAF11Q99590 1463 aaKnown RBP28.01■■■□□ 2.07
NECAB3-213ENST00000488489 PIK3C2GO75747 1445 aa28■■■□□ 2.07
NECAB3-213ENST00000488489 NEXMIFQ5QGS0 1516 aa28■■■□□ 2.07
NECAB3-213ENST00000488489 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
NECAB3-213ENST00000488489 MYO5BQ9ULV0 1848 aa28■■■□□ 2.07
NECAB3-213ENST00000488489 CCER2I3L3R5 266 aa27.99■■■□□ 2.07
NECAB3-213ENST00000488489 NUTM2DQ5VT03 806 aaPredicted RBP27.99■■■□□ 2.07
NECAB3-213ENST00000488489 SPATA31D1Q6ZQQ2 1576 aa27.98■■■□□ 2.07
NECAB3-213ENST00000488489 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
NECAB3-213ENST00000488489 DISP3Q9P2K9 1392 aa27.97■■■□□ 2.07
NECAB3-213ENST00000488489 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
NECAB3-213ENST00000488489 C14orf93Q9H972 538 aaKnown RBP27.95■■■□□ 2.06
NECAB3-213ENST00000488489 VGFO15240 615 aaPredicted RBP27.94■■■□□ 2.06
NECAB3-213ENST00000488489 PRKRIP1Q9H875 184 aaPredicted RBP27.91■■■□□ 2.06
NECAB3-213ENST00000488489 TMF1P82094 1093 aa27.9■■■□□ 2.06
NECAB3-213ENST00000488489 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
NECAB3-213ENST00000488489 ZFYVE9O95405 1425 aa27.89■■■□□ 2.06
NECAB3-213ENST00000488489 ADGRB1O14514 1584 aa27.88■■■□□ 2.05
NECAB3-213ENST00000488489 EIF3AQ14152 1382 aaKnown RBP27.87■■■□□ 2.05
NECAB3-213ENST00000488489 TMEM132EQ6IEE7 984 aa27.86■■■□□ 2.05
NECAB3-213ENST00000488489 STAG3Q9UJ98 1225 aa27.86■■■□□ 2.05
NECAB3-213ENST00000488489 A2ML1A8K2U0 1454 aa27.84■■■□□ 2.05
NECAB3-213ENST00000488489 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
NECAB3-213ENST00000488489 TRAK1Q9UPV9 953 aa27.8■■■□□ 2.04
NECAB3-213ENST00000488489 CCDC184Q52MB2 194 aa27.78■■■□□ 2.04
NECAB3-213ENST00000488489 TNRQ92752 1358 aa27.77■■■□□ 2.04
NECAB3-213ENST00000488489 CNGB1Q14028 1251 aaPredicted RBP27.77■■■□□ 2.04
NECAB3-213ENST00000488489 MYO3AQ8NEV4 1616 aa27.77■■■□□ 2.04
NECAB3-213ENST00000488489 CEBPAP49715 358 aaPredicted RBP27.76■■■□□ 2.03
NECAB3-213ENST00000488489 PER1O15534 1290 aaPredicted RBP27.74■■■□□ 2.03
NECAB3-213ENST00000488489 CENPJQ9HC77 1338 aaPredicted RBP27.73■■■□□ 2.03
NECAB3-213ENST00000488489 RIMS2Q9UQ26 1411 aa27.73■■■□□ 2.03
NECAB3-213ENST00000488489 ASXL1Q8IXJ9 1541 aa27.73■■■□□ 2.03
NECAB3-213ENST00000488489 CDCA8Q53HL2 280 aa27.71■■■□□ 2.03
NECAB3-213ENST00000488489 PANK3Q9H999 370 aa27.71■■■□□ 2.03
NECAB3-213ENST00000488489 SBNO2Q9Y2G9 1366 aa27.71■■■□□ 2.03
NECAB3-213ENST00000488489 FER1L4A9Z1Z3 1794 aa27.7■■■□□ 2.02
NECAB3-213ENST00000488489 C3P01024 1663 aa27.69■■■□□ 2.02
NECAB3-213ENST00000488489 SLC24A1O60721 1099 aa27.68■■■□□ 2.02
NECAB3-213ENST00000488489 ALKQ9UM73 1620 aa27.67■■■□□ 2.02
NECAB3-213ENST00000488489 ARHGEF28Q8N1W1 1705 aaKnown RBP27.66■■■□□ 2.02
NECAB3-213ENST00000488489 QRICH2Q9H0J4 1663 aa27.66■■■□□ 2.02
NECAB3-213ENST00000488489 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
NECAB3-213ENST00000488489 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
NECAB3-213ENST00000488489 MRS2Q9HD23 443 aa27.64■■■□□ 2.02
NECAB3-213ENST00000488489 MYOM1P52179 1685 aa27.64■■■□□ 2.02
NECAB3-213ENST00000488489 STK26Q9P289 416 aa27.64■■■□□ 2.01
NECAB3-213ENST00000488489 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
NECAB3-213ENST00000488489 PTPRMP28827 1452 aa27.61■■■□□ 2.01
NECAB3-213ENST00000488489 YTHDC2Q9H6S0 1430 aaKnown RBP27.6■■■□□ 2.01
NECAB3-213ENST00000488489 NLRP1Q9C000 1473 aa27.6■■■□□ 2.01
NECAB3-213ENST00000488489 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.6■■■□□ 2.01
NECAB3-213ENST00000488489 TMEM2Q9UHN6 1383 aa27.59■■■□□ 2.01
NECAB3-213ENST00000488489 RALBP1Q15311 655 aa27.58■■■□□ 2.01
NECAB3-213ENST00000488489 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2
NECAB3-213ENST00000488489 KTN1Q86UP2 1357 aaKnown RBP27.57■■■□□ 2
NECAB3-213ENST00000488489 NRXN3Q9Y4C0 1643 aa27.57■■■□□ 2
NECAB3-213ENST00000488489 PARD3Q8TEW0 1356 aa27.56■■■□□ 2
NECAB3-213ENST00000488489 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
NECAB3-213ENST00000488489 CC2D1BQ5T0F9 858 aaKnown RBP27.54■■■□□ 2
NECAB3-213ENST00000488489 HDGFP51858 240 aaKnown RBP27.53■■■□□ 2
NECAB3-213ENST00000488489 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
NECAB3-213ENST00000488489 FAM9BQ8IZU0 186 aa27.53■■■□□ 2
NECAB3-213ENST00000488489 PRAM1Q96QH2 718 aa27.52■■■□□ 2
NECAB3-213ENST00000488489 TULP4Q9NRJ4 1543 aa27.51■■■□□ 2
NECAB3-213ENST00000488489 LTKP29376 864 aa27.5■■□□□ 1.99
NECAB3-213ENST00000488489 KNSTRNQ9Y448 316 aa27.5■■□□□ 1.99
NECAB3-213ENST00000488489 AMER1Q5JTC6 1135 aaPredicted RBP27.49■■□□□ 1.99
NECAB3-213ENST00000488489 METP08581 1390 aa27.49■■□□□ 1.99
NECAB3-213ENST00000488489 EVC2Q86UK5 1308 aa27.48■■□□□ 1.99
NECAB3-213ENST00000488489 RIMS1Q86UR5 1692 aaKnown RBP27.48■■□□□ 1.99
NECAB3-213ENST00000488489 MYT1Q01538 1121 aa27.47■■□□□ 1.99
NECAB3-213ENST00000488489 LRPPRCP42704 1394 aaKnown RBP27.47■■□□□ 1.99
NECAB3-213ENST00000488489 CARD14Q9BXL6 1004 aa27.46■■□□□ 1.99
NECAB3-213ENST00000488489 POGKQ9P215 609 aa27.46■■□□□ 1.99
NECAB3-213ENST00000488489 HNRNPUQ00839 825 aaKnown RBP eCLIP27.46■■□□□ 1.99
NECAB3-213ENST00000488489 TMC1Q8TDI8 760 aa27.45■■□□□ 1.98
NECAB3-213ENST00000488489 SLC12A5Q9H2X9 1139 aa27.45■■□□□ 1.98
NECAB3-213ENST00000488489 SUPT16HQ9Y5B9 1047 aaKnown RBP27.45■■□□□ 1.98
NECAB3-213ENST00000488489 BRD4O60885 1362 aaPredicted RBP27.45■■□□□ 1.98
NECAB3-213ENST00000488489 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
NECAB3-213ENST00000488489 PUS7Q96PZ0 661 aaKnown RBP27.44■■□□□ 1.98
NECAB3-213ENST00000488489 MINK1Q8N4C8 1332 aaPredicted RBP27.44■■□□□ 1.98
NECAB3-213ENST00000488489 ABCC11Q96J66 1382 aa27.43■■□□□ 1.98
NECAB3-213ENST00000488489 TXNDC2Q86VQ3 553 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms