RNA–Protein interactions for RNA: ENST00000488411.1

ZC3H11A-210, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-210ENST00000488411 WDR62O43379 1518 aa11.08□□□□□ -0.64
ZC3H11A-210ENST00000488411 NUDT18Q6ZVK8 323 aa11.07□□□□□ -0.64
ZC3H11A-210ENST00000488411 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
ZC3H11A-210ENST00000488411 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
ZC3H11A-210ENST00000488411 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
ZC3H11A-210ENST00000488411 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
ZC3H11A-210ENST00000488411 RSF1Q96T23 1441 aaPredicted RBP11.06□□□□□ -0.64
ZC3H11A-210ENST00000488411 E2F4Q16254 413 aa11.05□□□□□ -0.64
ZC3H11A-210ENST00000488411 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
ZC3H11A-210ENST00000488411 RNF40O75150 1001 aa11.04□□□□□ -0.64
ZC3H11A-210ENST00000488411 OSBPP22059 807 aa11.04□□□□□ -0.64
ZC3H11A-210ENST00000488411 GGCXP38435 758 aa11.04□□□□□ -0.64
ZC3H11A-210ENST00000488411 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
ZC3H11A-210ENST00000488411 CFTRP13569 1480 aa11.03□□□□□ -0.64
ZC3H11A-210ENST00000488411 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
ZC3H11A-210ENST00000488411 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
ZC3H11A-210ENST00000488411 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
ZC3H11A-210ENST00000488411 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
ZC3H11A-210ENST00000488411 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
ZC3H11A-210ENST00000488411 SLF2Q8IX21 1173 aa11□□□□□ -0.65
ZC3H11A-210ENST00000488411 SWT1Q5T5J6 900 aaKnown RBP10.99□□□□□ -0.65
ZC3H11A-210ENST00000488411 COPS2P61201 443 aa10.98□□□□□ -0.65
ZC3H11A-210ENST00000488411 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
ZC3H11A-210ENST00000488411 ZPR1O75312 459 aa10.96□□□□□ -0.65
ZC3H11A-210ENST00000488411 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
ZC3H11A-210ENST00000488411 SPRYD3Q8NCJ5 442 aa10.95□□□□□ -0.66
ZC3H11A-210ENST00000488411 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
ZC3H11A-210ENST00000488411 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
ZC3H11A-210ENST00000488411 PRR14Q9BWN1 585 aa10.94□□□□□ -0.66
ZC3H11A-210ENST00000488411 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
ZC3H11A-210ENST00000488411 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
ZC3H11A-210ENST00000488411 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
ZC3H11A-210ENST00000488411 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
ZC3H11A-210ENST00000488411 EYA1Q99502 592 aa10.92□□□□□ -0.66
ZC3H11A-210ENST00000488411 CCDC88BA6NC98 1476 aa10.92□□□□□ -0.66
ZC3H11A-210ENST00000488411 SLC19A1P41440 591 aa10.9□□□□□ -0.66
ZC3H11A-210ENST00000488411 RNF223E7ERA6 249 aa10.89□□□□□ -0.67
ZC3H11A-210ENST00000488411 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
ZC3H11A-210ENST00000488411 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
ZC3H11A-210ENST00000488411 DGAT1O75907 488 aa10.86□□□□□ -0.67
ZC3H11A-210ENST00000488411 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
ZC3H11A-210ENST00000488411 PRR20EP86478 221 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 PRR20CP86479 221 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 PRR20DP86480 221 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 PRR20BP86481 221 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 PRR20AP86496 221 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
ZC3H11A-210ENST00000488411 TOPBP1Q92547 1522 aa10.84□□□□□ -0.67
ZC3H11A-210ENST00000488411 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
ZC3H11A-210ENST00000488411 MYT1Q01538 1121 aa10.84□□□□□ -0.67
ZC3H11A-210ENST00000488411 PKDCCQ504Y2 493 aa10.84□□□□□ -0.67
ZC3H11A-210ENST00000488411 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
ZC3H11A-210ENST00000488411 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
ZC3H11A-210ENST00000488411 ANKLE1Q8NAG6 615 aa10.83□□□□□ -0.68
ZC3H11A-210ENST00000488411 DNAJB2P25686 324 aa10.8□□□□□ -0.68
ZC3H11A-210ENST00000488411 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
ZC3H11A-210ENST00000488411 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
ZC3H11A-210ENST00000488411 TLL1O43897 1013 aa10.79□□□□□ -0.68
ZC3H11A-210ENST00000488411 RIMBP3CA6NJZ7 1639 aa10.78□□□□□ -0.68
ZC3H11A-210ENST00000488411 RIMBP3BA6NNM3 1639 aa10.78□□□□□ -0.68
ZC3H11A-210ENST00000488411 RIMBP3Q9UFD9 1639 aa10.78□□□□□ -0.68
ZC3H11A-210ENST00000488411 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
ZC3H11A-210ENST00000488411 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.68
ZC3H11A-210ENST00000488411 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
ZC3H11A-210ENST00000488411 S1PR4O95977 384 aa10.77□□□□□ -0.69
ZC3H11A-210ENST00000488411 KMT5BQ4FZB7 885 aa10.77□□□□□ -0.69
ZC3H11A-210ENST00000488411 ZNF697Q5TEC3 545 aa10.77□□□□□ -0.69
ZC3H11A-210ENST00000488411 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
ZC3H11A-210ENST00000488411 AQRO60306 1485 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■■■■□ 25.8
ZC3H11A-210ENST00000488411 POTECB2RU33 542 aa10.76□□□□□ -0.69
ZC3H11A-210ENST00000488411 GDF9O60383 454 aa10.76□□□□□ -0.69
ZC3H11A-210ENST00000488411 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
ZC3H11A-210ENST00000488411 PTGDRQ13258 359 aa10.75□□□□□ -0.69
ZC3H11A-210ENST00000488411 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
ZC3H11A-210ENST00000488411 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
ZC3H11A-210ENST00000488411 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 ADH1BP00325 375 aa10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 CYB5RLQ6IPT4 315 aa10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 PAXIP1Q6ZW49 1069 aaPredicted RBP10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 POLA1P09884 1462 aaPredicted RBP10.73□□□□□ -0.69
ZC3H11A-210ENST00000488411 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
ZC3H11A-210ENST00000488411 CHD1O14646 1710 aa10.72□□□□□ -0.69
ZC3H11A-210ENST00000488411 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
ZC3H11A-210ENST00000488411 SOGA1O94964 1423 aa10.71□□□□□ -0.69
ZC3H11A-210ENST00000488411 CFHP08603 1231 aa10.71□□□□□ -0.69
ZC3H11A-210ENST00000488411 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
ZC3H11A-210ENST00000488411 RAD54L2Q9Y4B4 1467 aa10.7□□□□□ -0.7
ZC3H11A-210ENST00000488411 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
ZC3H11A-210ENST00000488411 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
ZC3H11A-210ENST00000488411 NR1I2O75469 434 aa10.7□□□□□ -0.7
ZC3H11A-210ENST00000488411 ARHGEF1Q92888 912 aaKnown RBP10.69□□□□□ -0.7
ZC3H11A-210ENST00000488411 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
ZC3H11A-210ENST00000488411 PLA2G2CQ5R387 149 aa10.68□□□□□ -0.7
ZC3H11A-210ENST00000488411 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
ZC3H11A-210ENST00000488411 SLC10A3P09131 477 aa10.67□□□□□ -0.7
ZC3H11A-210ENST00000488411 TREML4Q6UXN2 200 aa10.67□□□□□ -0.7
ZC3H11A-210ENST00000488411 LCE2AQ5TA79 106 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms