RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
COPS7B-221ENST00000488111 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
COPS7B-221ENST00000488111 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
COPS7B-221ENST00000488111 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
COPS7B-221ENST00000488111 NEURL4Q96JN8 1562 aa18.97■□□□□ 0.63
COPS7B-221ENST00000488111 C3P01024 1663 aa18.96■□□□□ 0.63
COPS7B-221ENST00000488111 HSPA5P11021 654 aaKnown RBP18.95■□□□□ 0.62
COPS7B-221ENST00000488111 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
COPS7B-221ENST00000488111 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
COPS7B-221ENST00000488111 RIMS1Q86UR5 1692 aaKnown RBP18.94■□□□□ 0.62
COPS7B-221ENST00000488111 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
COPS7B-221ENST00000488111 STAC3Q96MF2 364 aa18.94■□□□□ 0.62
COPS7B-221ENST00000488111 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
COPS7B-221ENST00000488111 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
COPS7B-221ENST00000488111 RALGAPBQ86X10 1494 aa18.93■□□□□ 0.62
COPS7B-221ENST00000488111 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
COPS7B-221ENST00000488111 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
COPS7B-221ENST00000488111 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
COPS7B-221ENST00000488111 A2ML1A8K2U0 1454 aa18.91■□□□□ 0.62
COPS7B-221ENST00000488111 NEFLP07196 543 aa18.91■□□□□ 0.62
COPS7B-221ENST00000488111 VGFO15240 615 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-221ENST00000488111 MYOM2P54296 1465 aa18.9■□□□□ 0.62
COPS7B-221ENST00000488111 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
COPS7B-221ENST00000488111 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.61
COPS7B-221ENST00000488111 IFT172Q9UG01 1749 aa18.89■□□□□ 0.61
COPS7B-221ENST00000488111 MSH5O43196 834 aa18.89■□□□□ 0.61
COPS7B-221ENST00000488111 USP47Q96K76 1375 aa18.88■□□□□ 0.61
COPS7B-221ENST00000488111 PPLO60437 1756 aa18.88■□□□□ 0.61
COPS7B-221ENST00000488111 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
COPS7B-221ENST00000488111 NLRP1Q9C000 1473 aa18.85■□□□□ 0.61
COPS7B-221ENST00000488111 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
COPS7B-221ENST00000488111 PIK3C2GO75747 1445 aa18.84■□□□□ 0.61
COPS7B-221ENST00000488111 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
COPS7B-221ENST00000488111 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.61
COPS7B-221ENST00000488111 C14orf93Q9H972 538 aaKnown RBP18.83■□□□□ 0.61
COPS7B-221ENST00000488111 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.6
COPS7B-221ENST00000488111 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
COPS7B-221ENST00000488111 PTPRMP28827 1452 aa18.83■□□□□ 0.6
COPS7B-221ENST00000488111 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
COPS7B-221ENST00000488111 ZFYVE9O95405 1425 aa18.81■□□□□ 0.6
COPS7B-221ENST00000488111 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
COPS7B-221ENST00000488111 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
COPS7B-221ENST00000488111 C11orf95C9JLR9 678 aaPredicted RBP18.8■□□□□ 0.6
COPS7B-221ENST00000488111 KDM4FA0A1W2PPD8 638 aa18.78■□□□□ 0.6
COPS7B-221ENST00000488111 LTKP29376 864 aa18.78■□□□□ 0.6
COPS7B-221ENST00000488111 DDX10Q13206 875 aaKnown RBP18.78■□□□□ 0.6
COPS7B-221ENST00000488111 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
COPS7B-221ENST00000488111 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
COPS7B-221ENST00000488111 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
COPS7B-221ENST00000488111 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
COPS7B-221ENST00000488111 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
COPS7B-221ENST00000488111 PRKCSHP14314 528 aaPredicted RBP18.76■□□□□ 0.59
COPS7B-221ENST00000488111 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
COPS7B-221ENST00000488111 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
COPS7B-221ENST00000488111 KIAA1210Q9ULL0 1709 aa18.74■□□□□ 0.59
COPS7B-221ENST00000488111 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
COPS7B-221ENST00000488111 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
COPS7B-221ENST00000488111 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
COPS7B-221ENST00000488111 CEP170BQ9Y4F5 1589 aaPredicted RBP18.74■□□□□ 0.59
COPS7B-221ENST00000488111 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
COPS7B-221ENST00000488111 LAMC1P11047 1609 aa18.73■□□□□ 0.59
COPS7B-221ENST00000488111 STK26Q9P289 416 aa18.73■□□□□ 0.59
COPS7B-221ENST00000488111 ADGRB1O14514 1584 aa18.71■□□□□ 0.59
COPS7B-221ENST00000488111 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.58
COPS7B-221ENST00000488111 TESK2Q96S53 571 aa18.7■□□□□ 0.58
COPS7B-221ENST00000488111 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
COPS7B-221ENST00000488111 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
COPS7B-221ENST00000488111 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
COPS7B-221ENST00000488111 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
COPS7B-221ENST00000488111 SLIT1O75093 1534 aa18.69■□□□□ 0.58
COPS7B-221ENST00000488111 SETD1BQ9UPS6 1966 aaKnown RBP18.68■□□□□ 0.58
COPS7B-221ENST00000488111 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
COPS7B-221ENST00000488111 SLC26A8Q96RN1 970 aa18.68■□□□□ 0.58
COPS7B-221ENST00000488111 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
COPS7B-221ENST00000488111 EIF3AQ14152 1382 aaKnown RBP18.67■□□□□ 0.58
COPS7B-221ENST00000488111 ANP32CO43423 234 aa18.66■□□□□ 0.58
COPS7B-221ENST00000488111 METP08581 1390 aa18.66■□□□□ 0.58
COPS7B-221ENST00000488111 PLEKHG1Q9ULL1 1385 aa18.66■□□□□ 0.58
COPS7B-221ENST00000488111 NRXN3Q9Y4C0 1643 aa18.65■□□□□ 0.58
COPS7B-221ENST00000488111 SAFB2Q14151 953 aaKnown RBP eCLIP18.65■□□□□ 0.58
COPS7B-221ENST00000488111 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
COPS7B-221ENST00000488111 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.58
COPS7B-221ENST00000488111 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
COPS7B-221ENST00000488111 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
COPS7B-221ENST00000488111 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
COPS7B-221ENST00000488111 ADAMTS13Q76LX8 1427 aa18.63■□□□□ 0.57
COPS7B-221ENST00000488111 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
COPS7B-221ENST00000488111 TMF1P82094 1093 aa18.63■□□□□ 0.57
COPS7B-221ENST00000488111 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
COPS7B-221ENST00000488111 HSPA2P54652 639 aa18.6■□□□□ 0.57
COPS7B-221ENST00000488111 NCKAP5LQ9HCH0 1330 aa18.59■□□□□ 0.57
COPS7B-221ENST00000488111 POGKQ9P215 609 aa18.59■□□□□ 0.57
COPS7B-221ENST00000488111 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
COPS7B-221ENST00000488111 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
COPS7B-221ENST00000488111 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.57
COPS7B-221ENST00000488111 TBX22Q9Y458 520 aa18.57■□□□□ 0.56
COPS7B-221ENST00000488111 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
COPS7B-221ENST00000488111 MED14O60244 1454 aa18.56■□□□□ 0.56
COPS7B-221ENST00000488111 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
COPS7B-221ENST00000488111 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms