RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 TMEM134Q9H6X4 195 aa10.1□□□□□ -0.79
PTEN-204ENST00000487939 CLCN1P35523 988 aa10.09□□□□□ -0.79
PTEN-204ENST00000487939 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
PTEN-204ENST00000487939 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
PTEN-204ENST00000487939 WNT2BQ93097 391 aa10.08□□□□□ -0.8
PTEN-204ENST00000487939 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
PTEN-204ENST00000487939 PTPN5P54829 565 aa10.07□□□□□ -0.8
PTEN-204ENST00000487939 MDM2Q00987 491 aaPredicted RBP10.07□□□□□ -0.8
PTEN-204ENST00000487939 PDE4DQ08499 809 aa10.07□□□□□ -0.8
PTEN-204ENST00000487939 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
PTEN-204ENST00000487939 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
PTEN-204ENST00000487939 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
PTEN-204ENST00000487939 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
PTEN-204ENST00000487939 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
PTEN-204ENST00000487939 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.06□□□□□ -0.8
PTEN-204ENST00000487939 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
PTEN-204ENST00000487939 SULF1Q8IWU6 871 aa10.05□□□□□ -0.8
PTEN-204ENST00000487939 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
PTEN-204ENST00000487939 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
PTEN-204ENST00000487939 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
PTEN-204ENST00000487939 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
PTEN-204ENST00000487939 A0A0G2JS52 829 aa10.02□□□□□ -0.81
PTEN-204ENST00000487939 RNF40O75150 1001 aa10.02□□□□□ -0.81
PTEN-204ENST00000487939 THSD4Q6ZMP0 1018 aa10.02□□□□□ -0.81
PTEN-204ENST00000487939 PARP9Q8IXQ6 854 aa10.02□□□□□ -0.81
PTEN-204ENST00000487939 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
PTEN-204ENST00000487939 NEUROD2Q15784 382 aa10□□□□□ -0.81
PTEN-204ENST00000487939 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
PTEN-204ENST00000487939 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
PTEN-204ENST00000487939 BCAMP50895 628 aa9.99□□□□□ -0.81
PTEN-204ENST00000487939 FAM217BQ9NTX9 383 aaPredicted RBP9.99□□□□□ -0.81
PTEN-204ENST00000487939 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
PTEN-204ENST00000487939 PPP4CP60510 307 aa9.98□□□□□ -0.81
PTEN-204ENST00000487939 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
PTEN-204ENST00000487939 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
PTEN-204ENST00000487939 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
PTEN-204ENST00000487939 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
PTEN-204ENST00000487939 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
PTEN-204ENST00000487939 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
PTEN-204ENST00000487939 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
PTEN-204ENST00000487939 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
PTEN-204ENST00000487939 GPBP1L1Q9HC44 474 aaPredicted RBP9.95□□□□□ -0.82
PTEN-204ENST00000487939 CD46P15529 392 aa9.94□□□□□ -0.82
PTEN-204ENST00000487939 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
PTEN-204ENST00000487939 SLC10A3P09131 477 aa9.93□□□□□ -0.82
PTEN-204ENST00000487939 CFHP08603 1231 aa9.92□□□□□ -0.82
PTEN-204ENST00000487939 WBP1LQ9NX94 342 aa9.92□□□□□ -0.82
PTEN-204ENST00000487939 MS4A1P11836 297 aa9.91□□□□□ -0.82
PTEN-204ENST00000487939 GCGRP47871 477 aa9.9□□□□□ -0.82
PTEN-204ENST00000487939 DDRGK1Q96HY6 314 aa9.9□□□□□ -0.82
PTEN-204ENST00000487939 BEGAINQ9BUH8 593 aa9.9□□□□□ -0.82
PTEN-204ENST00000487939 DIXDC1Q155Q3 683 aa9.88□□□□□ -0.83
PTEN-204ENST00000487939 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
PTEN-204ENST00000487939 ACTN4O43707 911 aaKnown RBP9.87□□□□□ -0.83
PTEN-204ENST00000487939 USP46P62068 366 aa9.87□□□□□ -0.83
PTEN-204ENST00000487939 KDM4AO75164 1064 aa9.86□□□□□ -0.83
PTEN-204ENST00000487939 ITGBL1O95965 494 aaPredicted RBP9.86□□□□□ -0.83
PTEN-204ENST00000487939 APLP1P51693 650 aa9.86□□□□□ -0.83
PTEN-204ENST00000487939 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
PTEN-204ENST00000487939 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
PTEN-204ENST00000487939 RSPH6AQ9H0K4 717 aa9.84□□□□□ -0.83
PTEN-204ENST00000487939 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
PTEN-204ENST00000487939 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
PTEN-204ENST00000487939 FUT2Q10981 343 aa9.82□□□□□ -0.84
PTEN-204ENST00000487939 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
PTEN-204ENST00000487939 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
PTEN-204ENST00000487939 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
PTEN-204ENST00000487939 Q6ZNB5 142 aa9.8□□□□□ -0.84
PTEN-204ENST00000487939 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
PTEN-204ENST00000487939 HOXA2O43364 376 aa9.79□□□□□ -0.84
PTEN-204ENST00000487939 NR1I2O75469 434 aa9.79□□□□□ -0.84
PTEN-204ENST00000487939 GJA5P36382 358 aa9.77□□□□□ -0.85
PTEN-204ENST00000487939 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
PTEN-204ENST00000487939 MORN1Q5T089 497 aa9.77□□□□□ -0.85
PTEN-204ENST00000487939 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
PTEN-204ENST00000487939 MYSM1Q5VVJ2 828 aa9.76□□□□□ -0.85
PTEN-204ENST00000487939 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
PTEN-204ENST00000487939 MTRQ99707 1265 aa9.76□□□□□ -0.85
PTEN-204ENST00000487939 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
PTEN-204ENST00000487939 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
PTEN-204ENST00000487939 MOXD2PA6NHM9 499 aa9.75□□□□□ -0.85
PTEN-204ENST00000487939 COPS2P61201 443 aa9.75□□□□□ -0.85
PTEN-204ENST00000487939 Q3C1V9 767 aa9.75□□□□□ -0.85
PTEN-204ENST00000487939 SPTLC1O15269 473 aa9.74□□□□□ -0.85
PTEN-204ENST00000487939 FDX1P10109 184 aa9.74□□□□□ -0.85
PTEN-204ENST00000487939 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
PTEN-204ENST00000487939 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
PTEN-204ENST00000487939 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
PTEN-204ENST00000487939 NDUFV2P19404 249 aa9.73□□□□□ -0.85
PTEN-204ENST00000487939 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
PTEN-204ENST00000487939 TJAP1Q5JTD0 557 aa9.73□□□□□ -0.85
PTEN-204ENST00000487939 SLC27A5Q9Y2P5 690 aa9.73□□□□□ -0.85
PTEN-204ENST00000487939 TUSC1Q2TAM9 212 aa9.72□□□□□ -0.85
PTEN-204ENST00000487939 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
PTEN-204ENST00000487939 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
PTEN-204ENST00000487939 ZPR1O75312 459 aa9.71□□□□□ -0.86
PTEN-204ENST00000487939 KCNC4Q03721 635 aa9.71□□□□□ -0.86
PTEN-204ENST00000487939 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
PTEN-204ENST00000487939 PCMTD1Q96MG8 357 aaPredicted RBP9.71□□□□□ -0.86
PTEN-204ENST00000487939 POLR3EQ9NVU0 708 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms