RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 IFIT2P09913 472 aaKnown RBP18.8■□□□□ 0.6
PKD1-220ENST00000487932 PLIN1O60240 522 aa18.79■□□□□ 0.6
PKD1-220ENST00000487932 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
PKD1-220ENST00000487932 IPO7O95373 1038 aaKnown RBP18.79■□□□□ 0.6
PKD1-220ENST00000487932 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
PKD1-220ENST00000487932 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
PKD1-220ENST00000487932 CCER2I3L3R5 266 aa18.78■□□□□ 0.6
PKD1-220ENST00000487932 TRDNQ13061 729 aa18.78■□□□□ 0.6
PKD1-220ENST00000487932 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
PKD1-220ENST00000487932 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
PKD1-220ENST00000487932 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.6
PKD1-220ENST00000487932 ANKRD20A12PQ8NF67 263 aa18.76■□□□□ 0.59
PKD1-220ENST00000487932 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
PKD1-220ENST00000487932 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
PKD1-220ENST00000487932 ANKRD30AQ9BXX3 1397 aa18.75■□□□□ 0.59
PKD1-220ENST00000487932 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
PKD1-220ENST00000487932 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
PKD1-220ENST00000487932 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
PKD1-220ENST00000487932 NEUROD6Q96NK8 337 aa18.72■□□□□ 0.59
PKD1-220ENST00000487932 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
PKD1-220ENST00000487932 HSP90AB2PQ58FF8 381 aa18.72■□□□□ 0.59
PKD1-220ENST00000487932 NUTM2GQ5VZR2 741 aa18.72■□□□□ 0.59
PKD1-220ENST00000487932 EPS15P42566 896 aa18.71■□□□□ 0.59
PKD1-220ENST00000487932 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
PKD1-220ENST00000487932 CHMP4CQ96CF2 233 aa18.71■□□□□ 0.59
PKD1-220ENST00000487932 GPS2Q13227 327 aa18.71■□□□□ 0.59
PKD1-220ENST00000487932 G3BP1Q13283 466 aaKnown RBP eCLIP18.71■□□□□ 0.59
PKD1-220ENST00000487932 ATP6V1DQ9Y5K8 247 aa18.71■□□□□ 0.59
PKD1-220ENST00000487932 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
PKD1-220ENST00000487932 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
PKD1-220ENST00000487932 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
PKD1-220ENST00000487932 SKIDA1Q1XH10 827 aa18.69■□□□□ 0.58
PKD1-220ENST00000487932 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
PKD1-220ENST00000487932 DDX11L8A8MPP1 907 aa18.69■□□□□ 0.58
PKD1-220ENST00000487932 HOOK1Q9UJC3 728 aaKnown RBP18.69■□□□□ 0.58
PKD1-220ENST00000487932 PANK3Q9H999 370 aa18.68■□□□□ 0.58
PKD1-220ENST00000487932 VPS37CA5D8V6 355 aaPredicted RBP18.68■□□□□ 0.58
PKD1-220ENST00000487932 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
PKD1-220ENST00000487932 FKBP5Q13451 457 aaPredicted RBP18.67■□□□□ 0.58
PKD1-220ENST00000487932 ATF3P18847 181 aa18.67■□□□□ 0.58
PKD1-220ENST00000487932 RIC3Q7Z5B4 369 aa18.67■□□□□ 0.58
PKD1-220ENST00000487932 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
PKD1-220ENST00000487932 ZNF771Q7L3S4 317 aaPredicted RBP18.66■□□□□ 0.58
PKD1-220ENST00000487932 IPO9Q96P70 1041 aaKnown RBP18.66■□□□□ 0.58
PKD1-220ENST00000487932 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
PKD1-220ENST00000487932 ZKSCAN2Q63HK3 967 aa18.65■□□□□ 0.58
PKD1-220ENST00000487932 IBSPP21815 317 aaPredicted RBP18.65■□□□□ 0.58
PKD1-220ENST00000487932 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
PKD1-220ENST00000487932 COG6Q9Y2V7 657 aa18.65■□□□□ 0.58
PKD1-220ENST00000487932 RUFY1Q96T51 708 aa18.65■□□□□ 0.58
PKD1-220ENST00000487932 SAFBQ15424 915 aaKnown RBP eCLIP18.64■□□□□ 0.57
PKD1-220ENST00000487932 NLRP2Q9NX02 1062 aa18.63■□□□□ 0.57
PKD1-220ENST00000487932 OFD1O75665 1012 aa18.63■□□□□ 0.57
PKD1-220ENST00000487932 CGNL1Q0VF96 1302 aa18.63■□□□□ 0.57
PKD1-220ENST00000487932 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
PKD1-220ENST00000487932 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
PKD1-220ENST00000487932 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
PKD1-220ENST00000487932 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
PKD1-220ENST00000487932 ATP2B2Q01814 1243 aa18.62■□□□□ 0.57
PKD1-220ENST00000487932 RNF20Q5VTR2 975 aa18.62■□□□□ 0.57
PKD1-220ENST00000487932 PDILTQ8N807 584 aa18.61■□□□□ 0.57
PKD1-220ENST00000487932 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
PKD1-220ENST00000487932 STK11IPQ8N1F8 1099 aa18.61■□□□□ 0.57
PKD1-220ENST00000487932 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
PKD1-220ENST00000487932 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
PKD1-220ENST00000487932 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
PKD1-220ENST00000487932 SF3B2Q13435 895 aaKnown RBP18.61■□□□□ 0.57
PKD1-220ENST00000487932 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
PKD1-220ENST00000487932 RIPK4P57078 832 aa18.6■□□□□ 0.57
PKD1-220ENST00000487932 SASS6Q6UVJ0 657 aa18.6■□□□□ 0.57
PKD1-220ENST00000487932 HMOX1P09601 288 aa18.59■□□□□ 0.57
PKD1-220ENST00000487932 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
PKD1-220ENST00000487932 BRMS1Q9HCU9 246 aa18.59■□□□□ 0.57
PKD1-220ENST00000487932 NACADO15069 1562 aa18.58■□□□□ 0.57
PKD1-220ENST00000487932 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.57
PKD1-220ENST00000487932 CRBNQ96SW2 442 aa18.58■□□□□ 0.57
PKD1-220ENST00000487932 SMC3Q9UQE7 1217 aa18.58■□□□□ 0.57
PKD1-220ENST00000487932 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.56
PKD1-220ENST00000487932 ATP2B1P20020 1258 aa18.58■□□□□ 0.56
PKD1-220ENST00000487932 CALRP27797 417 aaKnown RBP18.58■□□□□ 0.56
PKD1-220ENST00000487932 NUTM2BA6NNL0 878 aaPredicted RBP18.57■□□□□ 0.56
PKD1-220ENST00000487932 NUTM2EB1AL46 878 aaPredicted RBP18.57■□□□□ 0.56
PKD1-220ENST00000487932 NUTM2AQ8IVF1 878 aaPredicted RBP18.57■□□□□ 0.56
PKD1-220ENST00000487932 AK7Q96M32 723 aa18.57■□□□□ 0.56
PKD1-220ENST00000487932 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
PKD1-220ENST00000487932 VGFO15240 615 aaPredicted RBP18.56■□□□□ 0.56
PKD1-220ENST00000487932 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
PKD1-220ENST00000487932 REC8O95072 547 aa18.56■□□□□ 0.56
PKD1-220ENST00000487932 CAGE1Q8TC20 777 aa18.56■□□□□ 0.56
PKD1-220ENST00000487932 HSP90AA2PQ14568 343 aaPredicted RBP18.56■□□□□ 0.56
PKD1-220ENST00000487932 STRN4Q9NRL3 753 aa18.56■□□□□ 0.56
PKD1-220ENST00000487932 FAM161AQ3B820 660 aa18.55■□□□□ 0.56
PKD1-220ENST00000487932 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
PKD1-220ENST00000487932 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
PKD1-220ENST00000487932 DNAJC2Q99543 621 aaKnown RBP18.53■□□□□ 0.56
PKD1-220ENST00000487932 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 CDR1P51861 262 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 CCDC73Q6ZRK6 1079 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 SOGA1O94964 1423 aa18.53■□□□□ 0.56
PKD1-220ENST00000487932 APAF1O14727 1248 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms