RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
PRKCB-208ENST00000487674 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
PRKCB-208ENST00000487674 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
PRKCB-208ENST00000487674 TOM1O60784 492 aa13.34□□□□□ -0.27
PRKCB-208ENST00000487674 ALKQ9UM73 1620 aa13.34□□□□□ -0.27
PRKCB-208ENST00000487674 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
PRKCB-208ENST00000487674 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
PRKCB-208ENST00000487674 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
PRKCB-208ENST00000487674 PIP4K2BP78356 416 aa13.31□□□□□ -0.28
PRKCB-208ENST00000487674 HSPA1LP34931 641 aa13.3□□□□□ -0.28
PRKCB-208ENST00000487674 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-208ENST00000487674 ZBTB22O15209 634 aa13.29□□□□□ -0.28
PRKCB-208ENST00000487674 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
PRKCB-208ENST00000487674 TMEM2Q9UHN6 1383 aa13.29□□□□□ -0.28
PRKCB-208ENST00000487674 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
PRKCB-208ENST00000487674 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
PRKCB-208ENST00000487674 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-208ENST00000487674 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
PRKCB-208ENST00000487674 NOS1P29475 1434 aa13.28□□□□□ -0.28
PRKCB-208ENST00000487674 LTKP29376 864 aa13.27□□□□□ -0.29
PRKCB-208ENST00000487674 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
PRKCB-208ENST00000487674 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.29
PRKCB-208ENST00000487674 TET3O43151 1660 aa13.26□□□□□ -0.29
PRKCB-208ENST00000487674 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
PRKCB-208ENST00000487674 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
PRKCB-208ENST00000487674 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
PRKCB-208ENST00000487674 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
PRKCB-208ENST00000487674 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
PRKCB-208ENST00000487674 UNC13BO14795 1591 aa13.24□□□□□ -0.29
PRKCB-208ENST00000487674 IDI1Q13907 227 aa13.23□□□□□ -0.29
PRKCB-208ENST00000487674 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
PRKCB-208ENST00000487674 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
PRKCB-208ENST00000487674 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
PRKCB-208ENST00000487674 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
PRKCB-208ENST00000487674 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
PRKCB-208ENST00000487674 IQGAP3Q86VI3 1631 aa13.19□□□□□ -0.3
PRKCB-208ENST00000487674 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
PRKCB-208ENST00000487674 TMEM131LA2VDJ0 1609 aa13.18□□□□□ -0.3
PRKCB-208ENST00000487674 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-208ENST00000487674 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
PRKCB-208ENST00000487674 E9PCH4 1651 aa13.18□□□□□ -0.3
PRKCB-208ENST00000487674 KCNA6P17658 529 aa13.17□□□□□ -0.3
PRKCB-208ENST00000487674 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
PRKCB-208ENST00000487674 FAM135BQ49AJ0 1406 aa13.15□□□□□ -0.3
PRKCB-208ENST00000487674 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
PRKCB-208ENST00000487674 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
PRKCB-208ENST00000487674 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
PRKCB-208ENST00000487674 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
PRKCB-208ENST00000487674 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
PRKCB-208ENST00000487674 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-208ENST00000487674 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-208ENST00000487674 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
PRKCB-208ENST00000487674 BCANQ96GW7 911 aa13.11□□□□□ -0.31
PRKCB-208ENST00000487674 MSH6P52701 1360 aa13.1□□□□□ -0.31
PRKCB-208ENST00000487674 NUP155O75694 1391 aa13.09□□□□□ -0.31
PRKCB-208ENST00000487674 SPHKAPQ2M3C7 1700 aa13.09□□□□□ -0.31
PRKCB-208ENST00000487674 PIP4P2Q8N4L2 257 aa13.09□□□□□ -0.31
PRKCB-208ENST00000487674 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRKCB-208ENST00000487674 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
PRKCB-208ENST00000487674 RBM33Q96EV2 1170 aaKnown RBP13.08□□□□□ -0.32
PRKCB-208ENST00000487674 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
PRKCB-208ENST00000487674 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
PRKCB-208ENST00000487674 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
PRKCB-208ENST00000487674 TRPM2O94759 1503 aa13.07□□□□□ -0.32
PRKCB-208ENST00000487674 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
PRKCB-208ENST00000487674 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
PRKCB-208ENST00000487674 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
PRKCB-208ENST00000487674 ITGAEP38570 1179 aa13.06□□□□□ -0.32
PRKCB-208ENST00000487674 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
PRKCB-208ENST00000487674 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
PRKCB-208ENST00000487674 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
PRKCB-208ENST00000487674 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-208ENST00000487674 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
PRKCB-208ENST00000487674 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
PRKCB-208ENST00000487674 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
PRKCB-208ENST00000487674 RRBP1Q9P2E9 1410 aaKnown RBP13.03□□□□□ -0.32
PRKCB-208ENST00000487674 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.33
PRKCB-208ENST00000487674 CLTCL1P53675 1640 aa13.02□□□□□ -0.33
PRKCB-208ENST00000487674 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-208ENST00000487674 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-208ENST00000487674 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
PRKCB-208ENST00000487674 JCADQ9P266 1359 aa13□□□□□ -0.33
PRKCB-208ENST00000487674 C14orf37Q86TY3 774 aa13□□□□□ -0.33
PRKCB-208ENST00000487674 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
PRKCB-208ENST00000487674 DCCP43146 1447 aa12.99□□□□□ -0.33
PRKCB-208ENST00000487674 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
PRKCB-208ENST00000487674 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
PRKCB-208ENST00000487674 NAIPQ13075 1403 aa12.98□□□□□ -0.33
PRKCB-208ENST00000487674 KIF1BO60333 1816 aa12.98□□□□□ -0.33
PRKCB-208ENST00000487674 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
PRKCB-208ENST00000487674 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
PRKCB-208ENST00000487674 SHPRHQ149N8 1683 aa12.97□□□□□ -0.33
PRKCB-208ENST00000487674 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
PRKCB-208ENST00000487674 ATF3P18847 181 aa12.96□□□□□ -0.33
PRKCB-208ENST00000487674 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■□□ 19.1
PRKCB-208ENST00000487674 HFM1A2PYH4 1435 aa12.96□□□□□ -0.34
PRKCB-208ENST00000487674 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
PRKCB-208ENST00000487674 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
PRKCB-208ENST00000487674 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
PRKCB-208ENST00000487674 LRP6O75581 1613 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms