RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 CFAP65Q6ZU64 1925 aaKnown RBP20.52■□□□□ 0.88
FGFR1-222ENST00000487647 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
FGFR1-222ENST00000487647 MROH2AA6NES4 1674 aa20.52■□□□□ 0.87
FGFR1-222ENST00000487647 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
FGFR1-222ENST00000487647 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
FGFR1-222ENST00000487647 ADGRF5Q8IZF2 1346 aa20.51■□□□□ 0.87
FGFR1-222ENST00000487647 C11orf95C9JLR9 678 aaPredicted RBP20.5■□□□□ 0.87
FGFR1-222ENST00000487647 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
FGFR1-222ENST00000487647 PIK3C2GO75747 1445 aa20.47■□□□□ 0.87
FGFR1-222ENST00000487647 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
FGFR1-222ENST00000487647 C14orf93Q9H972 538 aaKnown RBP20.46■□□□□ 0.87
FGFR1-222ENST00000487647 PPLO60437 1756 aa20.46■□□□□ 0.87
FGFR1-222ENST00000487647 SLC24A1O60721 1099 aa20.45■□□□□ 0.87
FGFR1-222ENST00000487647 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
FGFR1-222ENST00000487647 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.86
FGFR1-222ENST00000487647 POLR1AO95602 1720 aaPredicted RBP20.45■□□□□ 0.86
FGFR1-222ENST00000487647 NEXMIFQ5QGS0 1516 aa20.44■□□□□ 0.86
FGFR1-222ENST00000487647 ANP32CO43423 234 aa20.44■□□□□ 0.86
FGFR1-222ENST00000487647 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
FGFR1-222ENST00000487647 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
FGFR1-222ENST00000487647 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
FGFR1-222ENST00000487647 TESK2Q96S53 571 aa20.42■□□□□ 0.86
FGFR1-222ENST00000487647 TNRQ92752 1358 aa20.42■□□□□ 0.86
FGFR1-222ENST00000487647 IQGAP1P46940 1657 aa20.39■□□□□ 0.85
FGFR1-222ENST00000487647 A2ML1A8K2U0 1454 aa20.39■□□□□ 0.85
FGFR1-222ENST00000487647 TMF1P82094 1093 aa20.38■□□□□ 0.85
FGFR1-222ENST00000487647 HDGFP51858 240 aaKnown RBP20.38■□□□□ 0.85
FGFR1-222ENST00000487647 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
FGFR1-222ENST00000487647 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
FGFR1-222ENST00000487647 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
FGFR1-222ENST00000487647 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
FGFR1-222ENST00000487647 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
FGFR1-222ENST00000487647 KDM5AP29375 1690 aaKnown RBP20.34■□□□□ 0.85
FGFR1-222ENST00000487647 RIMS2Q9UQ26 1411 aa20.32■□□□□ 0.84
FGFR1-222ENST00000487647 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
FGFR1-222ENST00000487647 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
FGFR1-222ENST00000487647 POLR3GLQ9BT43 218 aa20.31■□□□□ 0.84
FGFR1-222ENST00000487647 FER1L4A9Z1Z3 1794 aa20.3■□□□□ 0.84
FGFR1-222ENST00000487647 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
FGFR1-222ENST00000487647 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
FGFR1-222ENST00000487647 CENPJQ9HC77 1338 aaPredicted RBP20.27■□□□□ 0.84
FGFR1-222ENST00000487647 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.83
FGFR1-222ENST00000487647 MYO3AQ8NEV4 1616 aa20.26■□□□□ 0.83
FGFR1-222ENST00000487647 C3P01024 1663 aa20.26■□□□□ 0.83
FGFR1-222ENST00000487647 TMEM2Q9UHN6 1383 aa20.26■□□□□ 0.83
FGFR1-222ENST00000487647 TMEM132EQ6IEE7 984 aa20.25■□□□□ 0.83
FGFR1-222ENST00000487647 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
FGFR1-222ENST00000487647 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
FGFR1-222ENST00000487647 ALKQ9UM73 1620 aa20.22■□□□□ 0.83
FGFR1-222ENST00000487647 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
FGFR1-222ENST00000487647 KTN1Q86UP2 1357 aaKnown RBP20.2■□□□□ 0.82
FGFR1-222ENST00000487647 PUS7Q96PZ0 661 aaKnown RBP20.2■□□□□ 0.82
FGFR1-222ENST00000487647 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
FGFR1-222ENST00000487647 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
FGFR1-222ENST00000487647 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
FGFR1-222ENST00000487647 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
FGFR1-222ENST00000487647 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
FGFR1-222ENST00000487647 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
FGFR1-222ENST00000487647 SLIT1O75093 1534 aa20.16■□□□□ 0.82
FGFR1-222ENST00000487647 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
FGFR1-222ENST00000487647 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
FGFR1-222ENST00000487647 ARHGAP23Q9P227 1491 aa20.15■□□□□ 0.82
FGFR1-222ENST00000487647 PER1O15534 1290 aaPredicted RBP20.15■□□□□ 0.82
FGFR1-222ENST00000487647 ABCC11Q96J66 1382 aa20.15■□□□□ 0.82
FGFR1-222ENST00000487647 RALBP1Q15311 655 aa20.14■□□□□ 0.81
FGFR1-222ENST00000487647 PANK3Q9H999 370 aa20.14■□□□□ 0.81
FGFR1-222ENST00000487647 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
FGFR1-222ENST00000487647 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
FGFR1-222ENST00000487647 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
FGFR1-222ENST00000487647 EVC2Q86UK5 1308 aa20.13■□□□□ 0.81
FGFR1-222ENST00000487647 RIMS1Q86UR5 1692 aaKnown RBP20.13■□□□□ 0.81
FGFR1-222ENST00000487647 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
FGFR1-222ENST00000487647 STK26Q9P289 416 aa20.13■□□□□ 0.81
FGFR1-222ENST00000487647 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
FGFR1-222ENST00000487647 PTPRMP28827 1452 aa20.12■□□□□ 0.81
FGFR1-222ENST00000487647 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
FGFR1-222ENST00000487647 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
FGFR1-222ENST00000487647 POGKQ9P215 609 aa20.1■□□□□ 0.81
FGFR1-222ENST00000487647 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
FGFR1-222ENST00000487647 LTKP29376 864 aa20.09■□□□□ 0.81
FGFR1-222ENST00000487647 BCANQ96GW7 911 aa20.09■□□□□ 0.81
FGFR1-222ENST00000487647 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
FGFR1-222ENST00000487647 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
FGFR1-222ENST00000487647 CEP170BQ9Y4F5 1589 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-222ENST00000487647 TECPR2O15040 1411 aa20.07■□□□□ 0.8
FGFR1-222ENST00000487647 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
FGFR1-222ENST00000487647 KNSTRNQ9Y448 316 aa20.07■□□□□ 0.8
FGFR1-222ENST00000487647 METP08581 1390 aa20.07■□□□□ 0.8
FGFR1-222ENST00000487647 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
FGFR1-222ENST00000487647 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
FGFR1-222ENST00000487647 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
FGFR1-222ENST00000487647 NPC1L1Q9UHC9 1359 aa20.05■□□□□ 0.8
FGFR1-222ENST00000487647 MED14O60244 1454 aa20.05■□□□□ 0.8
FGFR1-222ENST00000487647 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
FGFR1-222ENST00000487647 NINLQ9Y2I6 1382 aa20.04■□□□□ 0.8
FGFR1-222ENST00000487647 SETD1BQ9UPS6 1966 aaKnown RBP20.04■□□□□ 0.8
FGFR1-222ENST00000487647 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
FGFR1-222ENST00000487647 MRS2Q9HD23 443 aa20.03■□□□□ 0.8
FGFR1-222ENST00000487647 TULP4Q9NRJ4 1543 aa20.02■□□□□ 0.8
FGFR1-222ENST00000487647 ATAD2Q6PL18 1390 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms