RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
R3HDM1-218ENST00000487294 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
R3HDM1-218ENST00000487294 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 OSBPP22059 807 aa9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 SYNJ1O43426 1573 aa9.4□□□□□ -0.9
R3HDM1-218ENST00000487294 GRIN2BQ13224 1484 aa9.4□□□□□ -0.91
R3HDM1-218ENST00000487294 SEMA3EO15041 775 aa9.39□□□□□ -0.91
R3HDM1-218ENST00000487294 BCAMP50895 628 aa9.39□□□□□ -0.91
R3HDM1-218ENST00000487294 EN1Q05925 392 aaPredicted RBP9.39□□□□□ -0.91
R3HDM1-218ENST00000487294 ZFRQ96KR1 1074 aaKnown RBP9.39□□□□□ -0.91
R3HDM1-218ENST00000487294 SYNJ2O15056 1496 aa9.39□□□□□ -0.91
R3HDM1-218ENST00000487294 CUX1P39880 1505 aa9.38□□□□□ -0.91
R3HDM1-218ENST00000487294 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
R3HDM1-218ENST00000487294 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
R3HDM1-218ENST00000487294 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
R3HDM1-218ENST00000487294 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
R3HDM1-218ENST00000487294 CHMP7Q8WUX9 453 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-218ENST00000487294 MAP3K7O43318 606 aa9.35□□□□□ -0.91
R3HDM1-218ENST00000487294 SEPT9Q9UHD8 586 aaPredicted RBP9.34□□□□□ -0.91
R3HDM1-218ENST00000487294 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
R3HDM1-218ENST00000487294 ABCA10Q8WWZ4 1543 aa9.33□□□□□ -0.92
R3HDM1-218ENST00000487294 ABCA5Q8WWZ7 1642 aa9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 TSR3Q9UJK0 312 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-218ENST00000487294 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
R3HDM1-218ENST00000487294 KCNC4Q03721 635 aa9.3□□□□□ -0.92
R3HDM1-218ENST00000487294 PACS2Q86VP3 889 aa9.3□□□□□ -0.92
R3HDM1-218ENST00000487294 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
R3HDM1-218ENST00000487294 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
R3HDM1-218ENST00000487294 NUP160Q12769 1436 aa9.28□□□□□ -0.92
R3HDM1-218ENST00000487294 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
R3HDM1-218ENST00000487294 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
R3HDM1-218ENST00000487294 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
R3HDM1-218ENST00000487294 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
R3HDM1-218ENST00000487294 SHROOM2Q13796 1616 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 PRSS12P56730 875 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 CDCA7LQ96GN5 454 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 ADAMTS12P58397 1594 aa9.24□□□□□ -0.93
R3HDM1-218ENST00000487294 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
R3HDM1-218ENST00000487294 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
R3HDM1-218ENST00000487294 ERCC6L2Q5T890 1561 aa9.23□□□□□ -0.93
R3HDM1-218ENST00000487294 FHAD1B1AJZ9 1412 aa9.22□□□□□ -0.93
R3HDM1-218ENST00000487294 PPP4CP60510 307 aa9.22□□□□□ -0.93
R3HDM1-218ENST00000487294 PTGDRQ13258 359 aa9.22□□□□□ -0.93
R3HDM1-218ENST00000487294 ERICH3Q5RHP9 1530 aa9.21□□□□□ -0.93
R3HDM1-218ENST00000487294 TOP2BQ02880 1626 aa9.21□□□□□ -0.93
R3HDM1-218ENST00000487294 BIVM-ERCC5R4GMW8 1640 aa9.21□□□□□ -0.93
R3HDM1-218ENST00000487294 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
R3HDM1-218ENST00000487294 NBPF26B4DH59 902 aa9.21□□□□□ -0.94
R3HDM1-218ENST00000487294 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
R3HDM1-218ENST00000487294 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
R3HDM1-218ENST00000487294 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
R3HDM1-218ENST00000487294 TTC13Q8NBP0 860 aa9.19□□□□□ -0.94
R3HDM1-218ENST00000487294 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
R3HDM1-218ENST00000487294 LAPTM4AQ15012 233 aa9.17□□□□□ -0.94
R3HDM1-218ENST00000487294 TATDN2Q93075 761 aa9.17□□□□□ -0.94
R3HDM1-218ENST00000487294 SMAPO00193 183 aa9.16□□□□□ -0.94
R3HDM1-218ENST00000487294 Q6ZNB5 142 aa9.16□□□□□ -0.94
R3HDM1-218ENST00000487294 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
R3HDM1-218ENST00000487294 FCHSD2O94868 740 aa9.15□□□□□ -0.94
R3HDM1-218ENST00000487294 TJAP1Q5JTD0 557 aa9.15□□□□□ -0.94
R3HDM1-218ENST00000487294 KIF13AQ9H1H9 1805 aa9.15□□□□□ -0.95
R3HDM1-218ENST00000487294 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
R3HDM1-218ENST00000487294 GPR37O15354 613 aa9.14□□□□□ -0.95
R3HDM1-218ENST00000487294 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
R3HDM1-218ENST00000487294 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
R3HDM1-218ENST00000487294 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
R3HDM1-218ENST00000487294 MTRQ99707 1265 aa9.13□□□□□ -0.95
R3HDM1-218ENST00000487294 MAPKBP1O60336 1514 aa9.13□□□□□ -0.95
R3HDM1-218ENST00000487294 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
R3HDM1-218ENST00000487294 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
R3HDM1-218ENST00000487294 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
R3HDM1-218ENST00000487294 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.12□□□□□ -0.95
R3HDM1-218ENST00000487294 RUSC2Q8N2Y8 1516 aa9.11□□□□□ -0.95
R3HDM1-218ENST00000487294 FECHP22830 423 aa9.11□□□□□ -0.95
R3HDM1-218ENST00000487294 HIC1Q14526 733 aa9.11□□□□□ -0.95
R3HDM1-218ENST00000487294 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
R3HDM1-218ENST00000487294 GNPATO15228 680 aa9.09□□□□□ -0.95
R3HDM1-218ENST00000487294 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
R3HDM1-218ENST00000487294 EYA1Q99502 592 aa9.09□□□□□ -0.95
R3HDM1-218ENST00000487294 SUPT5HO00267 1087 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-218ENST00000487294 RNF40O75150 1001 aa9.08□□□□□ -0.96
R3HDM1-218ENST00000487294 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
R3HDM1-218ENST00000487294 KIAA0586Q9BVV6 1533 aa9.08□□□□□ -0.96
R3HDM1-218ENST00000487294 DIP2BQ9P265 1576 aa9.07□□□□□ -0.96
R3HDM1-218ENST00000487294 APLP1P51693 650 aa9.07□□□□□ -0.96
R3HDM1-218ENST00000487294 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
R3HDM1-218ENST00000487294 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
R3HDM1-218ENST00000487294 PRKD2Q9BZL6 878 aa9.07□□□□□ -0.96
R3HDM1-218ENST00000487294 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms