RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 RGL3Q3MIN7 710 aa12.19□□□□□ -0.46
NUDCD3-209ENST00000487118 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
NUDCD3-209ENST00000487118 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
NUDCD3-209ENST00000487118 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
NUDCD3-209ENST00000487118 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
NUDCD3-209ENST00000487118 MYOM2P54296 1465 aa12.18□□□□□ -0.46
NUDCD3-209ENST00000487118 LAMC1P11047 1609 aa12.18□□□□□ -0.46
NUDCD3-209ENST00000487118 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUDCD3-209ENST00000487118 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
NUDCD3-209ENST00000487118 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
NUDCD3-209ENST00000487118 HSPA5P11021 654 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-209ENST00000487118 SLC52A1Q9NWF4 448 aa12.16□□□□□ -0.46
NUDCD3-209ENST00000487118 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
NUDCD3-209ENST00000487118 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-209ENST00000487118 CFAP65Q6ZU64 1925 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-209ENST00000487118 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
NUDCD3-209ENST00000487118 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
NUDCD3-209ENST00000487118 PPLO60437 1756 aa12.13□□□□□ -0.47
NUDCD3-209ENST00000487118 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
NUDCD3-209ENST00000487118 USP47Q96K76 1375 aa12.13□□□□□ -0.47
NUDCD3-209ENST00000487118 TMEM131LA2VDJ0 1609 aa12.12□□□□□ -0.47
NUDCD3-209ENST00000487118 IDI1Q13907 227 aa12.12□□□□□ -0.47
NUDCD3-209ENST00000487118 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-209ENST00000487118 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
NUDCD3-209ENST00000487118 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
NUDCD3-209ENST00000487118 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
NUDCD3-209ENST00000487118 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
NUDCD3-209ENST00000487118 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
NUDCD3-209ENST00000487118 CARD11Q9BXL7 1154 aa12.11□□□□□ -0.47
NUDCD3-209ENST00000487118 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
NUDCD3-209ENST00000487118 RGS17Q9UGC6 210 aaPredicted RBP12.1□□□□□ -0.47
NUDCD3-209ENST00000487118 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
NUDCD3-209ENST00000487118 POLR1AO95602 1720 aaPredicted RBP12.09□□□□□ -0.47
NUDCD3-209ENST00000487118 NBPF1Q3BBV0 1214 aa12.09□□□□□ -0.47
NUDCD3-209ENST00000487118 IQGAP1P46940 1657 aa12.08□□□□□ -0.48
NUDCD3-209ENST00000487118 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
NUDCD3-209ENST00000487118 PIK3C2GO75747 1445 aa12.08□□□□□ -0.48
NUDCD3-209ENST00000487118 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
NUDCD3-209ENST00000487118 SETBP1Q9Y6X0 1596 aa12.07□□□□□ -0.48
NUDCD3-209ENST00000487118 WASHC2AQ641Q2 1341 aa12.07□□□□□ -0.48
NUDCD3-209ENST00000487118 MYO5BQ9ULV0 1848 aa12.07□□□□□ -0.48
NUDCD3-209ENST00000487118 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-209ENST00000487118 TNRQ92752 1358 aa12.06□□□□□ -0.48
NUDCD3-209ENST00000487118 CCDC7Q96M83 1385 aa12.06□□□□□ -0.48
NUDCD3-209ENST00000487118 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
NUDCD3-209ENST00000487118 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-209ENST00000487118 C11orf95C9JLR9 678 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-209ENST00000487118 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-209ENST00000487118 TOM1O60784 492 aa12.04□□□□□ -0.48
NUDCD3-209ENST00000487118 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
NUDCD3-209ENST00000487118 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 NLRP1Q9C000 1473 aa12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 ADGRB1O14514 1584 aa12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 KIF7Q2M1P5 1343 aa12.03□□□□□ -0.48
NUDCD3-209ENST00000487118 ST20-MTHFSA0A0A6YYL1 179 aa12.02□□□□□ -0.49
NUDCD3-209ENST00000487118 CFAP70Q5T0N1 1121 aa12.02□□□□□ -0.49
NUDCD3-209ENST00000487118 UBR1Q8IWV7 1749 aa12.01□□□□□ -0.49
NUDCD3-209ENST00000487118 MIER1Q8N108 512 aa12□□□□□ -0.49
NUDCD3-209ENST00000487118 TESK2Q96S53 571 aa12□□□□□ -0.49
NUDCD3-209ENST00000487118 RIMS2Q9UQ26 1411 aa12□□□□□ -0.49
NUDCD3-209ENST00000487118 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
NUDCD3-209ENST00000487118 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
NUDCD3-209ENST00000487118 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-209ENST00000487118 ASXL1Q8IXJ9 1541 aa11.98□□□□□ -0.49
NUDCD3-209ENST00000487118 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.498e-8■■■■□ 25.7
NUDCD3-209ENST00000487118 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
NUDCD3-209ENST00000487118 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.49
NUDCD3-209ENST00000487118 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUDCD3-209ENST00000487118 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
NUDCD3-209ENST00000487118 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
NUDCD3-209ENST00000487118 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-209ENST00000487118 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-209ENST00000487118 SLIT1O75093 1534 aa11.95□□□□□ -0.5
NUDCD3-209ENST00000487118 ARHGAP23Q9P227 1491 aa11.95□□□□□ -0.5
NUDCD3-209ENST00000487118 NRXN3Q9Y4C0 1643 aa11.94□□□□□ -0.5
NUDCD3-209ENST00000487118 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
NUDCD3-209ENST00000487118 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-209ENST00000487118 TMF1P82094 1093 aa11.93□□□□□ -0.5
NUDCD3-209ENST00000487118 ARHGEF28Q8N1W1 1705 aaKnown RBP11.93□□□□□ -0.5
NUDCD3-209ENST00000487118 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
NUDCD3-209ENST00000487118 STRCP1A6NGW2 1772 aa11.91□□□□□ -0.5
NUDCD3-209ENST00000487118 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
NUDCD3-209ENST00000487118 QRICH2Q9H0J4 1663 aa11.91□□□□□ -0.5
NUDCD3-209ENST00000487118 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-209ENST00000487118 ANP32CO43423 234 aa11.9□□□□□ -0.5
NUDCD3-209ENST00000487118 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
NUDCD3-209ENST00000487118 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-209ENST00000487118 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
NUDCD3-209ENST00000487118 CDCA8Q53HL2 280 aa11.89□□□□□ -0.51
NUDCD3-209ENST00000487118 TRAK1Q9UPV9 953 aa11.89□□□□□ -0.51
NUDCD3-209ENST00000487118 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-209ENST00000487118 ADAMTS13Q76LX8 1427 aa11.88□□□□□ -0.51
NUDCD3-209ENST00000487118 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-209ENST00000487118 MED14O60244 1454 aa11.88□□□□□ -0.51
NUDCD3-209ENST00000487118 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
NUDCD3-209ENST00000487118 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
NUDCD3-209ENST00000487118 LTKP29376 864 aa11.87□□□□□ -0.51
NUDCD3-209ENST00000487118 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms