RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
POLR1A-208ENST00000486964 PTPRMP28827 1452 aa13.36□□□□□ -0.27
POLR1A-208ENST00000486964 MYOM2P54296 1465 aa13.36□□□□□ -0.27
POLR1A-208ENST00000486964 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
POLR1A-208ENST00000486964 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
POLR1A-208ENST00000486964 USP47Q96K76 1375 aa13.34□□□□□ -0.27
POLR1A-208ENST00000486964 MLECQ14165 292 aa13.34□□□□□ -0.27
POLR1A-208ENST00000486964 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
POLR1A-208ENST00000486964 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
POLR1A-208ENST00000486964 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
POLR1A-208ENST00000486964 SPATA31D1Q6ZQQ2 1576 aa13.33□□□□□ -0.28
POLR1A-208ENST00000486964 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
POLR1A-208ENST00000486964 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
POLR1A-208ENST00000486964 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
POLR1A-208ENST00000486964 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
POLR1A-208ENST00000486964 ARID4BQ4LE39 1312 aaPredicted RBP13.31□□□□□ -0.28
POLR1A-208ENST00000486964 LAMC1P11047 1609 aa13.31□□□□□ -0.28
POLR1A-208ENST00000486964 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
POLR1A-208ENST00000486964 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
POLR1A-208ENST00000486964 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
POLR1A-208ENST00000486964 KIF1BO60333 1816 aa13.3□□□□□ -0.28
POLR1A-208ENST00000486964 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
POLR1A-208ENST00000486964 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
POLR1A-208ENST00000486964 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
POLR1A-208ENST00000486964 ANP32CO43423 234 aa13.29□□□□□ -0.28
POLR1A-208ENST00000486964 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
POLR1A-208ENST00000486964 IFT172Q9UG01 1749 aa13.28□□□□□ -0.28
POLR1A-208ENST00000486964 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
POLR1A-208ENST00000486964 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
POLR1A-208ENST00000486964 TESK2Q96S53 571 aa13.28□□□□□ -0.28
POLR1A-208ENST00000486964 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
POLR1A-208ENST00000486964 KIF7Q2M1P5 1343 aa13.28□□□□□ -0.28
POLR1A-208ENST00000486964 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
POLR1A-208ENST00000486964 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
POLR1A-208ENST00000486964 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
POLR1A-208ENST00000486964 PIK3C2GO75747 1445 aa13.27□□□□□ -0.29
POLR1A-208ENST00000486964 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
POLR1A-208ENST00000486964 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
POLR1A-208ENST00000486964 CFAP65Q6ZU64 1925 aaKnown RBP13.25□□□□□ -0.29
POLR1A-208ENST00000486964 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
POLR1A-208ENST00000486964 NEFLP07196 543 aa13.24□□□□□ -0.29
POLR1A-208ENST00000486964 PPLO60437 1756 aa13.23□□□□□ -0.29
POLR1A-208ENST00000486964 TNRQ92752 1358 aa13.23□□□□□ -0.29
POLR1A-208ENST00000486964 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
POLR1A-208ENST00000486964 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
POLR1A-208ENST00000486964 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.3
POLR1A-208ENST00000486964 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
POLR1A-208ENST00000486964 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
POLR1A-208ENST00000486964 IQGAP1P46940 1657 aa13.19□□□□□ -0.3
POLR1A-208ENST00000486964 FER1L4A9Z1Z3 1794 aa13.18□□□□□ -0.3
POLR1A-208ENST00000486964 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
POLR1A-208ENST00000486964 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
POLR1A-208ENST00000486964 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
POLR1A-208ENST00000486964 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
POLR1A-208ENST00000486964 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
POLR1A-208ENST00000486964 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
POLR1A-208ENST00000486964 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
POLR1A-208ENST00000486964 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
POLR1A-208ENST00000486964 TMF1P82094 1093 aa13.15□□□□□ -0.3
POLR1A-208ENST00000486964 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
POLR1A-208ENST00000486964 DISP3Q9P2K9 1392 aa13.15□□□□□ -0.3
POLR1A-208ENST00000486964 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
POLR1A-208ENST00000486964 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
POLR1A-208ENST00000486964 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
POLR1A-208ENST00000486964 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
POLR1A-208ENST00000486964 C3P01024 1663 aa13.13□□□□□ -0.31
POLR1A-208ENST00000486964 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
POLR1A-208ENST00000486964 HSPA2P54652 639 aa13.13□□□□□ -0.31
POLR1A-208ENST00000486964 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
POLR1A-208ENST00000486964 ASXL1Q8IXJ9 1541 aa13.12□□□□□ -0.31
POLR1A-208ENST00000486964 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
POLR1A-208ENST00000486964 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
POLR1A-208ENST00000486964 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
POLR1A-208ENST00000486964 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
POLR1A-208ENST00000486964 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
POLR1A-208ENST00000486964 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
POLR1A-208ENST00000486964 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
POLR1A-208ENST00000486964 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
POLR1A-208ENST00000486964 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
POLR1A-208ENST00000486964 SETD1BQ9UPS6 1966 aaKnown RBP13.1□□□□□ -0.31
POLR1A-208ENST00000486964 LTKP29376 864 aa13.1□□□□□ -0.31
POLR1A-208ENST00000486964 FKBP8Q14318 412 aa13.1□□□□□ -0.31
POLR1A-208ENST00000486964 CDCA8Q53HL2 280 aa13.1□□□□□ -0.31
POLR1A-208ENST00000486964 SLIT1O75093 1534 aa13.1□□□□□ -0.31
POLR1A-208ENST00000486964 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
POLR1A-208ENST00000486964 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
POLR1A-208ENST00000486964 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
POLR1A-208ENST00000486964 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
POLR1A-208ENST00000486964 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
POLR1A-208ENST00000486964 YTHDC2Q9H6S0 1430 aaKnown RBP13.08□□□□□ -0.32
POLR1A-208ENST00000486964 MED14O60244 1454 aa13.08□□□□□ -0.32
POLR1A-208ENST00000486964 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.32
POLR1A-208ENST00000486964 PLEKHG1Q9ULL1 1385 aa13.08□□□□□ -0.32
POLR1A-208ENST00000486964 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
POLR1A-208ENST00000486964 ADAMTS13Q76LX8 1427 aa13.07□□□□□ -0.32
POLR1A-208ENST00000486964 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
POLR1A-208ENST00000486964 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
POLR1A-208ENST00000486964 METP08581 1390 aa13.05□□□□□ -0.32
POLR1A-208ENST00000486964 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
POLR1A-208ENST00000486964 POLR3GLQ9BT43 218 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms