RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ATP10BO94823 1461 aa15.89■□□□□ 0.13
HSPG2-211ENST00000486901 ADGRL2O95490 1459 aa15.89■□□□□ 0.13
HSPG2-211ENST00000486901 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
HSPG2-211ENST00000486901 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
HSPG2-211ENST00000486901 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
HSPG2-211ENST00000486901 PDZRN3Q9UPQ7 1066 aa15.87■□□□□ 0.13
HSPG2-211ENST00000486901 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
HSPG2-211ENST00000486901 ZNF521Q96K83 1311 aa15.87■□□□□ 0.13
HSPG2-211ENST00000486901 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
HSPG2-211ENST00000486901 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
HSPG2-211ENST00000486901 BECN1Q14457 450 aa15.86■□□□□ 0.13
HSPG2-211ENST00000486901 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
HSPG2-211ENST00000486901 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 WWC1Q8IX03 1113 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 ARHGEF12Q9NZN5 1544 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 E9PSI1 815 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 TSR2Q969E8 191 aaKnown RBP15.85■□□□□ 0.13
HSPG2-211ENST00000486901 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
HSPG2-211ENST00000486901 UPF2Q9HAU5 1272 aaKnown RBP15.84■□□□□ 0.13
HSPG2-211ENST00000486901 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
HSPG2-211ENST00000486901 TCP11L2Q8N4U5 519 aa15.82■□□□□ 0.12
HSPG2-211ENST00000486901 ADGBQ8N7X0 1667 aa15.82■□□□□ 0.12
HSPG2-211ENST00000486901 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
HSPG2-211ENST00000486901 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
HSPG2-211ENST00000486901 CEP170Q5SW79 1584 aa15.81■□□□□ 0.12
HSPG2-211ENST00000486901 NKTRP30414 1462 aaKnown RBP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 WDR7Q9Y4E6 1490 aa15.79■□□□□ 0.12
HSPG2-211ENST00000486901 PTPRGP23470 1445 aa15.79■□□□□ 0.12
HSPG2-211ENST00000486901 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 U2SURPO15042 1029 aaKnown RBP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
HSPG2-211ENST00000486901 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
HSPG2-211ENST00000486901 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
HSPG2-211ENST00000486901 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
HSPG2-211ENST00000486901 E9PCH4 1651 aa15.78■□□□□ 0.12
HSPG2-211ENST00000486901 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
HSPG2-211ENST00000486901 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 ADGRF5Q8IZF2 1346 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 KIF3BO15066 747 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 MTHFSP49914 203 aa15.77■□□□□ 0.12
HSPG2-211ENST00000486901 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.11
HSPG2-211ENST00000486901 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.11
HSPG2-211ENST00000486901 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
HSPG2-211ENST00000486901 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
HSPG2-211ENST00000486901 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
HSPG2-211ENST00000486901 ARHGAP5Q13017 1502 aa15.76■□□□□ 0.11
HSPG2-211ENST00000486901 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
HSPG2-211ENST00000486901 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
HSPG2-211ENST00000486901 MAPK8IP3Q9UPT6 1336 aa15.74■□□□□ 0.11
HSPG2-211ENST00000486901 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
HSPG2-211ENST00000486901 PDE3AQ14432 1141 aa15.73■□□□□ 0.11
HSPG2-211ENST00000486901 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
HSPG2-211ENST00000486901 SMC4Q9NTJ3 1288 aa15.73■□□□□ 0.11
HSPG2-211ENST00000486901 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
HSPG2-211ENST00000486901 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
HSPG2-211ENST00000486901 C22orf23Q9BZE7 217 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-211ENST00000486901 TRAK2O60296 914 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 FBLN1P23142 703 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 MCM4P33991 863 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
HSPG2-211ENST00000486901 PLEKHG5O94827 1062 aa15.71■□□□□ 0.11
HSPG2-211ENST00000486901 UBE2Q2Q8WVN8 375 aa15.71■□□□□ 0.11
HSPG2-211ENST00000486901 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
HSPG2-211ENST00000486901 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.1
HSPG2-211ENST00000486901 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
HSPG2-211ENST00000486901 PMFBP1Q8TBY8 1022 aa15.7■□□□□ 0.1
HSPG2-211ENST00000486901 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
HSPG2-211ENST00000486901 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
HSPG2-211ENST00000486901 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
HSPG2-211ENST00000486901 STK26Q9P289 416 aa15.7■□□□□ 0.1
HSPG2-211ENST00000486901 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
HSPG2-211ENST00000486901 SAMD9LQ8IVG5 1584 aa15.69■□□□□ 0.1
HSPG2-211ENST00000486901 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
HSPG2-211ENST00000486901 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
HSPG2-211ENST00000486901 L1TD1Q5T7N2 865 aaKnown RBP15.68■□□□□ 0.1
HSPG2-211ENST00000486901 RUNDC1Q96C34 613 aa15.68■□□□□ 0.1
HSPG2-211ENST00000486901 ARID3AQ99856 593 aa15.68■□□□□ 0.1
HSPG2-211ENST00000486901 ASXL1Q8IXJ9 1541 aa15.68■□□□□ 0.1
HSPG2-211ENST00000486901 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
HSPG2-211ENST00000486901 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
HSPG2-211ENST00000486901 GGT6Q6P531 493 aa15.67■□□□□ 0.1
HSPG2-211ENST00000486901 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
HSPG2-211ENST00000486901 DZIP1LQ8IYY4 767 aaKnown RBP15.66■□□□□ 0.1
HSPG2-211ENST00000486901 GGNBP2Q9H3C7 697 aa15.66■□□□□ 0.1
HSPG2-211ENST00000486901 VSIG10Q8N0Z9 540 aa15.66■□□□□ 0.1
HSPG2-211ENST00000486901 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
HSPG2-211ENST00000486901 INSRP06213 1382 aa15.66■□□□□ 0.1
HSPG2-211ENST00000486901 NSD3Q9BZ95 1437 aa15.66■□□□□ 0.1
HSPG2-211ENST00000486901 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
HSPG2-211ENST00000486901 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
HSPG2-211ENST00000486901 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms