RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 AK7Q96M32 723 aa10.69□□□□□ -0.7
COPS3-209ENST00000486810 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
COPS3-209ENST00000486810 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
COPS3-209ENST00000486810 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.68□□□□□ -0.7
COPS3-209ENST00000486810 LRCH3Q96II8 777 aa10.67□□□□□ -0.7
COPS3-209ENST00000486810 PLSCR2Q9NRY7 297 aa10.67□□□□□ -0.7
COPS3-209ENST00000486810 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
COPS3-209ENST00000486810 AMHR2Q16671 573 aa10.65□□□□□ -0.7
COPS3-209ENST00000486810 PTPN5P54829 565 aa10.64□□□□□ -0.71
COPS3-209ENST00000486810 WBP1LQ9NX94 342 aa10.64□□□□□ -0.71
COPS3-209ENST00000486810 DAXXQ9UER7 740 aaPredicted RBP10.64□□□□□ -0.71
COPS3-209ENST00000486810 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
COPS3-209ENST00000486810 SLC10A3P09131 477 aa10.63□□□□□ -0.71
COPS3-209ENST00000486810 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
COPS3-209ENST00000486810 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
COPS3-209ENST00000486810 RNF40O75150 1001 aa10.6□□□□□ -0.71
COPS3-209ENST00000486810 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
COPS3-209ENST00000486810 PDE4DQ08499 809 aa10.6□□□□□ -0.71
COPS3-209ENST00000486810 PARP9Q8IXQ6 854 aa10.6□□□□□ -0.71
COPS3-209ENST00000486810 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
COPS3-209ENST00000486810 PPP4CP60510 307 aa10.58□□□□□ -0.72
COPS3-209ENST00000486810 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
COPS3-209ENST00000486810 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
COPS3-209ENST00000486810 CLCN1P35523 988 aa10.57□□□□□ -0.72
COPS3-209ENST00000486810 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
COPS3-209ENST00000486810 APLP1P51693 650 aa10.56□□□□□ -0.72
COPS3-209ENST00000486810 GIGYF2Q6Y7W6 1299 aaKnown RBP10.56□□□□□ -0.72
COPS3-209ENST00000486810 CD46P15529 392 aa10.55□□□□□ -0.72
COPS3-209ENST00000486810 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
COPS3-209ENST00000486810 CFHP08603 1231 aa10.53□□□□□ -0.72
COPS3-209ENST00000486810 MS4A1P11836 297 aa10.53□□□□□ -0.72
COPS3-209ENST00000486810 SSTR3P32745 418 aaPredicted RBP10.53□□□□□ -0.72
COPS3-209ENST00000486810 RDH13Q8NBN7 331 aa10.52□□□□□ -0.73
COPS3-209ENST00000486810 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.73
COPS3-209ENST00000486810 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
COPS3-209ENST00000486810 GCGRP47871 477 aa10.5□□□□□ -0.73
COPS3-209ENST00000486810 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
COPS3-209ENST00000486810 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
COPS3-209ENST00000486810 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
COPS3-209ENST00000486810 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
COPS3-209ENST00000486810 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
COPS3-209ENST00000486810 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
COPS3-209ENST00000486810 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
COPS3-209ENST00000486810 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
COPS3-209ENST00000486810 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
COPS3-209ENST00000486810 FUT2Q10981 343 aa10.44□□□□□ -0.74
COPS3-209ENST00000486810 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
COPS3-209ENST00000486810 MTRQ99707 1265 aa10.43□□□□□ -0.74
COPS3-209ENST00000486810 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
COPS3-209ENST00000486810 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
COPS3-209ENST00000486810 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
COPS3-209ENST00000486810 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
COPS3-209ENST00000486810 HLA-CQ95604 372 aa10.42□□□□□ -0.74
COPS3-209ENST00000486810 PRR14Q9BWN1 585 aa10.42□□□□□ -0.74
COPS3-209ENST00000486810 PCDHB3Q9Y5E6 796 aa10.42□□□□□ -0.74
COPS3-209ENST00000486810 KDM4AO75164 1064 aa10.41□□□□□ -0.74
COPS3-209ENST00000486810 SPIRE2Q8WWL2 714 aa10.41□□□□□ -0.74
COPS3-209ENST00000486810 ZNF516Q92618 1163 aa10.41□□□□□ -0.74
COPS3-209ENST00000486810 FAM117AQ9C073 453 aa10.41□□□□□ -0.74
COPS3-209ENST00000486810 COPS2P61201 443 aa10.4□□□□□ -0.74
COPS3-209ENST00000486810 MORN1Q5T089 497 aa10.39□□□□□ -0.75
COPS3-209ENST00000486810 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
COPS3-209ENST00000486810 HOXA2O43364 376 aa10.38□□□□□ -0.75
COPS3-209ENST00000486810 ATP6V1AP38606 617 aa10.38□□□□□ -0.75
COPS3-209ENST00000486810 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
COPS3-209ENST00000486810 TBC1D2Q9BYX2 928 aa10.37□□□□□ -0.75
COPS3-209ENST00000486810 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
COPS3-209ENST00000486810 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
COPS3-209ENST00000486810 SLC27A5Q9Y2P5 690 aa10.36□□□□□ -0.75
COPS3-209ENST00000486810 MOXD2PA6NHM9 499 aa10.35□□□□□ -0.75
COPS3-209ENST00000486810 ZPR1O75312 459 aa10.35□□□□□ -0.75
COPS3-209ENST00000486810 NDUFV2P19404 249 aa10.35□□□□□ -0.75
COPS3-209ENST00000486810 NUTM1Q86Y26 1132 aa10.35□□□□□ -0.75
COPS3-209ENST00000486810 SCUBE3Q8IX30 993 aa10.35□□□□□ -0.75
COPS3-209ENST00000486810 TLL1O43897 1013 aa10.34□□□□□ -0.75
COPS3-209ENST00000486810 USP46P62068 366 aa10.34□□□□□ -0.75
COPS3-209ENST00000486810 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
COPS3-209ENST00000486810 KCNC4Q03721 635 aa10.33□□□□□ -0.76
COPS3-209ENST00000486810 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
COPS3-209ENST00000486810 THAP11Q96EK4 314 aa10.33□□□□□ -0.76
COPS3-209ENST00000486810 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
COPS3-209ENST00000486810 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
COPS3-209ENST00000486810 NR1I2O75469 434 aa10.31□□□□□ -0.76
COPS3-209ENST00000486810 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
COPS3-209ENST00000486810 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
COPS3-209ENST00000486810 GRIPAP1Q4V328 841 aa10.29□□□□□ -0.76
COPS3-209ENST00000486810 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
COPS3-209ENST00000486810 BRICD5Q6PL45 260 aa10.29□□□□□ -0.76
COPS3-209ENST00000486810 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
COPS3-209ENST00000486810 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
COPS3-209ENST00000486810 SPTLC1O15269 473 aa10.28□□□□□ -0.76
COPS3-209ENST00000486810 FDX1P10109 184 aa10.28□□□□□ -0.76
COPS3-209ENST00000486810 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
COPS3-209ENST00000486810 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
COPS3-209ENST00000486810 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
COPS3-209ENST00000486810 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
COPS3-209ENST00000486810 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
COPS3-209ENST00000486810 ADH1BP00325 375 aa10.25□□□□□ -0.77
COPS3-209ENST00000486810 GJA5P36382 358 aa10.25□□□□□ -0.77
COPS3-209ENST00000486810 SH3D19Q5HYK7 790 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms