RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 MED14O60244 1454 aa27.32■■□□□ 1.96
PCOLCE-207ENST00000486440 TXNDC2Q86VQ3 553 aa27.31■■□□□ 1.96
PCOLCE-207ENST00000486440 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
PCOLCE-207ENST00000486440 NEXMIFQ5QGS0 1516 aa27.31■■□□□ 1.96
PCOLCE-207ENST00000486440 IQGAP1P46940 1657 aa27.29■■□□□ 1.96
PCOLCE-207ENST00000486440 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
PCOLCE-207ENST00000486440 NUTM2DQ5VT03 806 aaPredicted RBP27.25■■□□□ 1.95
PCOLCE-207ENST00000486440 EID1Q9Y6B2 187 aa27.25■■□□□ 1.95
PCOLCE-207ENST00000486440 NPHP4O75161 1426 aaPredicted RBP27.24■■□□□ 1.95
PCOLCE-207ENST00000486440 RGL3Q3MIN7 710 aa27.23■■□□□ 1.95
PCOLCE-207ENST00000486440 SIN3AQ96ST3 1273 aa27.22■■□□□ 1.95
PCOLCE-207ENST00000486440 DMRT2Q9Y5R5 561 aa27.21■■□□□ 1.95
PCOLCE-207ENST00000486440 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.2■■□□□ 1.94
PCOLCE-207ENST00000486440 NRXN3Q9Y4C0 1643 aa27.19■■□□□ 1.94
PCOLCE-207ENST00000486440 RPGRIP1LQ68CZ1 1315 aa27.19■■□□□ 1.94
PCOLCE-207ENST00000486440 HDGFP51858 240 aaKnown RBP27.18■■□□□ 1.94
PCOLCE-207ENST00000486440 PLEKHG1Q9ULL1 1385 aa27.18■■□□□ 1.94
PCOLCE-207ENST00000486440 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
PCOLCE-207ENST00000486440 STRCP1A6NGW2 1772 aa27.14■■□□□ 1.93
PCOLCE-207ENST00000486440 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
PCOLCE-207ENST00000486440 SETBP1Q9Y6X0 1596 aa27.13■■□□□ 1.93
PCOLCE-207ENST00000486440 ADAMTS13Q76LX8 1427 aa27.12■■□□□ 1.93
PCOLCE-207ENST00000486440 SETD1AO15047 1707 aaKnown RBP27.11■■□□□ 1.93
PCOLCE-207ENST00000486440 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
PCOLCE-207ENST00000486440 SLC26A8Q96RN1 970 aa27.1■■□□□ 1.93
PCOLCE-207ENST00000486440 ADGRF5Q8IZF2 1346 aa27.1■■□□□ 1.93
PCOLCE-207ENST00000486440 CHD2O14647 1828 aaKnown RBP27.09■■□□□ 1.93
PCOLCE-207ENST00000486440 NEUROD1Q13562 356 aa27.09■■□□□ 1.93
PCOLCE-207ENST00000486440 MYOM2P54296 1465 aa27.06■■□□□ 1.92
PCOLCE-207ENST00000486440 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
PCOLCE-207ENST00000486440 DIP2AQ14689 1571 aa27.05■■□□□ 1.92
PCOLCE-207ENST00000486440 LTBP4Q8N2S1 1624 aa27.05■■□□□ 1.92
PCOLCE-207ENST00000486440 DCAF11Q8TEB1 546 aa27.04■■□□□ 1.92
PCOLCE-207ENST00000486440 BCANQ96GW7 911 aa27.04■■□□□ 1.92
PCOLCE-207ENST00000486440 TBX22Q9Y458 520 aa27.04■■□□□ 1.92
PCOLCE-207ENST00000486440 ZNF335Q9H4Z2 1342 aaPredicted RBP27.04■■□□□ 1.92
PCOLCE-207ENST00000486440 ALKQ9UM73 1620 aa27.04■■□□□ 1.92
PCOLCE-207ENST00000486440 L3MBTL2Q969R5 705 aa27.02■■□□□ 1.92
PCOLCE-207ENST00000486440 PIK3C2GO75747 1445 aa27.01■■□□□ 1.91
PCOLCE-207ENST00000486440 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.91
PCOLCE-207ENST00000486440 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
PCOLCE-207ENST00000486440 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
PCOLCE-207ENST00000486440 METP08581 1390 aa26.97■■□□□ 1.91
PCOLCE-207ENST00000486440 NWD1Q149M9 1564 aa26.97■■□□□ 1.91
PCOLCE-207ENST00000486440 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
PCOLCE-207ENST00000486440 STAC3Q96MF2 364 aa26.96■■□□□ 1.91
PCOLCE-207ENST00000486440 PTPRUQ92729 1446 aa26.96■■□□□ 1.91
PCOLCE-207ENST00000486440 C14orf93Q9H972 538 aaKnown RBP26.93■■□□□ 1.9
PCOLCE-207ENST00000486440 ASXL1Q8IXJ9 1541 aa26.93■■□□□ 1.9
PCOLCE-207ENST00000486440 LAMC1P11047 1609 aa26.93■■□□□ 1.9
PCOLCE-207ENST00000486440 XRN1Q8IZH2 1706 aaKnown RBP26.93■■□□□ 1.9
PCOLCE-207ENST00000486440 KCNA6P17658 529 aa26.92■■□□□ 1.9
PCOLCE-207ENST00000486440 PIK3R4Q99570 1358 aa26.92■■□□□ 1.9
PCOLCE-207ENST00000486440 CFAP70Q5T0N1 1121 aa26.91■■□□□ 1.9
PCOLCE-207ENST00000486440 KIAA1210Q9ULL0 1709 aa26.9■■□□□ 1.9
PCOLCE-207ENST00000486440 CPS1P31327 1500 aa26.89■■□□□ 1.89
PCOLCE-207ENST00000486440 PRAG1Q86YV5 1406 aa26.89■■□□□ 1.89
PCOLCE-207ENST00000486440 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
PCOLCE-207ENST00000486440 LRRC7Q96NW7 1537 aa26.86■■□□□ 1.89
PCOLCE-207ENST00000486440 TMEM132EQ6IEE7 984 aa26.86■■□□□ 1.89
PCOLCE-207ENST00000486440 ADGRB1O14514 1584 aa26.85■■□□□ 1.89
PCOLCE-207ENST00000486440 AMOTL2Q9Y2J4 779 aa26.85■■□□□ 1.89
PCOLCE-207ENST00000486440 TRPM1Q7Z4N2 1603 aa26.84■■□□□ 1.89
PCOLCE-207ENST00000486440 NBPF8Q3BBV2 869 aa26.83■■□□□ 1.89
PCOLCE-207ENST00000486440 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
PCOLCE-207ENST00000486440 NKTRP30414 1462 aaKnown RBP26.82■■□□□ 1.88
PCOLCE-207ENST00000486440 CERKQ8TCT0 537 aa26.81■■□□□ 1.88
PCOLCE-207ENST00000486440 NBPF1Q3BBV0 1214 aa26.78■■□□□ 1.88
PCOLCE-207ENST00000486440 RBM33Q96EV2 1170 aaKnown RBP26.78■■□□□ 1.88
PCOLCE-207ENST00000486440 YTHDC2Q9H6S0 1430 aaKnown RBP26.78■■□□□ 1.88
PCOLCE-207ENST00000486440 LRPPRCP42704 1394 aaKnown RBP26.77■■□□□ 1.88
PCOLCE-207ENST00000486440 PROSER2Q86WR7 435 aaPredicted RBP26.77■■□□□ 1.88
PCOLCE-207ENST00000486440 TIMELESSQ9UNS1 1208 aa26.77■■□□□ 1.88
PCOLCE-207ENST00000486440 ABCC11Q96J66 1382 aa26.75■■□□□ 1.87
PCOLCE-207ENST00000486440 ROBO2Q9HCK4 1378 aa26.75■■□□□ 1.87
PCOLCE-207ENST00000486440 TECPR2O15040 1411 aa26.74■■□□□ 1.87
PCOLCE-207ENST00000486440 TMEM94Q12767 1356 aa26.74■■□□□ 1.87
PCOLCE-207ENST00000486440 STK26Q9P289 416 aa26.74■■□□□ 1.87
PCOLCE-207ENST00000486440 IQSEC2Q5JU85 1478 aa26.73■■□□□ 1.87
PCOLCE-207ENST00000486440 PTCH1Q13635 1447 aa26.72■■□□□ 1.87
PCOLCE-207ENST00000486440 ARHGEF28Q8N1W1 1705 aaKnown RBP26.71■■□□□ 1.87
PCOLCE-207ENST00000486440 NALCNQ8IZF0 1738 aa26.7■■□□□ 1.86
PCOLCE-207ENST00000486440 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.69■■□□□ 1.86
PCOLCE-207ENST00000486440 DLC1Q96QB1 1528 aa26.68■■□□□ 1.86
PCOLCE-207ENST00000486440 NCOA3Q9Y6Q9 1424 aa26.66■■□□□ 1.86
PCOLCE-207ENST00000486440 WAPLQ7Z5K2 1190 aa26.66■■□□□ 1.86
PCOLCE-207ENST00000486440 SIRT1Q96EB6 747 aa26.66■■□□□ 1.86
PCOLCE-207ENST00000486440 PLEKHH1Q9ULM0 1364 aa26.66■■□□□ 1.86
PCOLCE-207ENST00000486440 TRAK1Q9UPV9 953 aa26.65■■□□□ 1.86
PCOLCE-207ENST00000486440 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
PCOLCE-207ENST00000486440 FAM135BQ49AJ0 1406 aa26.64■■□□□ 1.85
PCOLCE-207ENST00000486440 GPRASP1Q5JY77 1395 aa26.62■■□□□ 1.85
PCOLCE-207ENST00000486440 ROCK2O75116 1388 aaKnown RBP26.6■■□□□ 1.85
PCOLCE-207ENST00000486440 PRAM1Q96QH2 718 aa26.59■■□□□ 1.85
PCOLCE-207ENST00000486440 ADGRL3Q9HAR2 1447 aa26.58■■□□□ 1.85
PCOLCE-207ENST00000486440 C19orf44Q9H6X5 657 aa26.58■■□□□ 1.85
PCOLCE-207ENST00000486440 MSH6P52701 1360 aa26.55■■□□□ 1.84
PCOLCE-207ENST00000486440 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
PCOLCE-207ENST00000486440 SAFB2Q14151 953 aaKnown RBP eCLIP26.53■■□□□ 1.84
PCOLCE-207ENST00000486440 QRICH2Q9H0J4 1663 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms