RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
C9orf16-202ENST00000486420 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
C9orf16-202ENST00000486420 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
C9orf16-202ENST00000486420 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
C9orf16-202ENST00000486420 KIF1BO60333 1816 aa18.12■□□□□ 0.49
C9orf16-202ENST00000486420 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
C9orf16-202ENST00000486420 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
C9orf16-202ENST00000486420 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
C9orf16-202ENST00000486420 CLTCL1P53675 1640 aa18.1■□□□□ 0.49
C9orf16-202ENST00000486420 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
C9orf16-202ENST00000486420 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
C9orf16-202ENST00000486420 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
C9orf16-202ENST00000486420 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
C9orf16-202ENST00000486420 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
C9orf16-202ENST00000486420 ANKRD30BQ9BXX2 1392 aa18.07■□□□□ 0.48
C9orf16-202ENST00000486420 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
C9orf16-202ENST00000486420 FOXD1Q16676 465 aa18.05■□□□□ 0.48
C9orf16-202ENST00000486420 LTKP29376 864 aa18.04■□□□□ 0.48
C9orf16-202ENST00000486420 BCANQ96GW7 911 aa18.03■□□□□ 0.48
C9orf16-202ENST00000486420 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
C9orf16-202ENST00000486420 UBAP1LF5GYI3 381 aa18.02■□□□□ 0.48
C9orf16-202ENST00000486420 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
C9orf16-202ENST00000486420 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
C9orf16-202ENST00000486420 LRRC7Q96NW7 1537 aa18.01■□□□□ 0.47
C9orf16-202ENST00000486420 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
C9orf16-202ENST00000486420 TBX22Q9Y458 520 aa18■□□□□ 0.47
C9orf16-202ENST00000486420 XIRP1Q702N8 1843 aaKnown RBP17.99■□□□□ 0.47
C9orf16-202ENST00000486420 NWD1Q149M9 1564 aa17.99■□□□□ 0.47
C9orf16-202ENST00000486420 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
C9orf16-202ENST00000486420 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
C9orf16-202ENST00000486420 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
C9orf16-202ENST00000486420 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
C9orf16-202ENST00000486420 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
C9orf16-202ENST00000486420 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
C9orf16-202ENST00000486420 TOM1O60784 492 aa17.95■□□□□ 0.46
C9orf16-202ENST00000486420 RGL3Q3MIN7 710 aa17.94■□□□□ 0.46
C9orf16-202ENST00000486420 MYOM2P54296 1465 aa17.94■□□□□ 0.46
C9orf16-202ENST00000486420 PPLO60437 1756 aa17.93■□□□□ 0.46
C9orf16-202ENST00000486420 KCNA6P17658 529 aa17.92■□□□□ 0.46
C9orf16-202ENST00000486420 CHD2O14647 1828 aaKnown RBP17.92■□□□□ 0.46
C9orf16-202ENST00000486420 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
C9orf16-202ENST00000486420 IFT172Q9UG01 1749 aa17.89■□□□□ 0.45
C9orf16-202ENST00000486420 ADAMTS13Q76LX8 1427 aa17.89■□□□□ 0.45
C9orf16-202ENST00000486420 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
C9orf16-202ENST00000486420 LAMC1P11047 1609 aa17.88■□□□□ 0.45
C9orf16-202ENST00000486420 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
C9orf16-202ENST00000486420 NUTM2DQ5VT03 806 aaPredicted RBP17.87■□□□□ 0.45
C9orf16-202ENST00000486420 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
C9orf16-202ENST00000486420 PIP4K2BP78356 416 aa17.86■□□□□ 0.45
C9orf16-202ENST00000486420 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
C9orf16-202ENST00000486420 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
C9orf16-202ENST00000486420 PIK3C2GO75747 1445 aa17.86■□□□□ 0.45
C9orf16-202ENST00000486420 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
C9orf16-202ENST00000486420 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
C9orf16-202ENST00000486420 TMEM94Q12767 1356 aa17.83■□□□□ 0.45
C9orf16-202ENST00000486420 TONSLQ96HA7 1378 aa17.82■□□□□ 0.44
C9orf16-202ENST00000486420 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
C9orf16-202ENST00000486420 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
C9orf16-202ENST00000486420 C14orf93Q9H972 538 aaKnown RBP17.82■□□□□ 0.44
C9orf16-202ENST00000486420 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
C9orf16-202ENST00000486420 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
C9orf16-202ENST00000486420 XRN1Q8IZH2 1706 aaKnown RBP17.8■□□□□ 0.44
C9orf16-202ENST00000486420 HSPA1LP34931 641 aa17.79■□□□□ 0.44
C9orf16-202ENST00000486420 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
C9orf16-202ENST00000486420 PTCH1Q13635 1447 aa17.79■□□□□ 0.44
C9orf16-202ENST00000486420 MED1Q15648 1581 aaPredicted RBP17.79■□□□□ 0.44
C9orf16-202ENST00000486420 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
C9orf16-202ENST00000486420 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
C9orf16-202ENST00000486420 MSH6P52701 1360 aa17.78■□□□□ 0.44
C9orf16-202ENST00000486420 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
C9orf16-202ENST00000486420 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
C9orf16-202ENST00000486420 METP08581 1390 aa17.77■□□□□ 0.43
C9orf16-202ENST00000486420 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.43
C9orf16-202ENST00000486420 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
C9orf16-202ENST00000486420 KIAA1210Q9ULL0 1709 aa17.76■□□□□ 0.43
C9orf16-202ENST00000486420 TECPR2O15040 1411 aa17.75■□□□□ 0.43
C9orf16-202ENST00000486420 FAM135BQ49AJ0 1406 aa17.75■□□□□ 0.43
C9orf16-202ENST00000486420 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
C9orf16-202ENST00000486420 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
C9orf16-202ENST00000486420 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
C9orf16-202ENST00000486420 DCCP43146 1447 aa17.73■□□□□ 0.43
C9orf16-202ENST00000486420 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.73■□□□□ 0.43
C9orf16-202ENST00000486420 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
C9orf16-202ENST00000486420 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
C9orf16-202ENST00000486420 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
C9orf16-202ENST00000486420 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
C9orf16-202ENST00000486420 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
C9orf16-202ENST00000486420 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
C9orf16-202ENST00000486420 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
C9orf16-202ENST00000486420 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
C9orf16-202ENST00000486420 DLC1Q96QB1 1528 aa17.7■□□□□ 0.42
C9orf16-202ENST00000486420 ATF3P18847 181 aa17.69■□□□□ 0.42
C9orf16-202ENST00000486420 PHLPP1O60346 1717 aa17.68■□□□□ 0.42
C9orf16-202ENST00000486420 RBM33Q96EV2 1170 aaKnown RBP17.67■□□□□ 0.42
C9orf16-202ENST00000486420 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
C9orf16-202ENST00000486420 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
C9orf16-202ENST00000486420 SLC24A1O60721 1099 aa17.66■□□□□ 0.42
C9orf16-202ENST00000486420 NALCNQ8IZF0 1738 aa17.66■□□□□ 0.42
C9orf16-202ENST00000486420 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
C9orf16-202ENST00000486420 STK26Q9P289 416 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms