RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 EFCAB6Q5THR3 1501 aa14.41□□□□□ -0.1
TMEM39A-208ENST00000486159 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
TMEM39A-208ENST00000486159 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
TMEM39A-208ENST00000486159 ITGAEP38570 1179 aa14.39□□□□□ -0.11
TMEM39A-208ENST00000486159 EID1Q9Y6B2 187 aa14.39□□□□□ -0.11
TMEM39A-208ENST00000486159 TET3O43151 1660 aa14.37□□□□□ -0.11
TMEM39A-208ENST00000486159 NUTM2DQ5VT03 806 aaPredicted RBP14.36□□□□□ -0.11
TMEM39A-208ENST00000486159 ADGRB3O60242 1522 aa14.36□□□□□ -0.11
TMEM39A-208ENST00000486159 KDM5AP29375 1690 aaKnown RBP14.33□□□□□ -0.11
TMEM39A-208ENST00000486159 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.12
TMEM39A-208ENST00000486159 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
TMEM39A-208ENST00000486159 E9PCH4 1651 aa14.33□□□□□ -0.12
TMEM39A-208ENST00000486159 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
TMEM39A-208ENST00000486159 UNC13BO14795 1591 aa14.32□□□□□ -0.12
TMEM39A-208ENST00000486159 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
TMEM39A-208ENST00000486159 KCNA6P17658 529 aa14.32□□□□□ -0.12
TMEM39A-208ENST00000486159 BCANQ96GW7 911 aa14.32□□□□□ -0.12
TMEM39A-208ENST00000486159 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
TMEM39A-208ENST00000486159 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
TMEM39A-208ENST00000486159 ZFYVE9O95405 1425 aa14.31□□□□□ -0.12
TMEM39A-208ENST00000486159 RIMS2Q9UQ26 1411 aa14.3□□□□□ -0.12
TMEM39A-208ENST00000486159 RPRD2Q5VT52 1461 aaKnown RBP14.29□□□□□ -0.12
TMEM39A-208ENST00000486159 ROCK1Q13464 1354 aa14.28□□□□□ -0.12
TMEM39A-208ENST00000486159 NUP155O75694 1391 aa14.27□□□□□ -0.12
TMEM39A-208ENST00000486159 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
TMEM39A-208ENST00000486159 TRIM26Q12899 539 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-208ENST00000486159 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
TMEM39A-208ENST00000486159 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
TMEM39A-208ENST00000486159 PLEKHG1Q9ULL1 1385 aa14.25□□□□□ -0.13
TMEM39A-208ENST00000486159 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
TMEM39A-208ENST00000486159 PPP1R15AO75807 674 aaPredicted RBP14.25□□□□□ -0.13
TMEM39A-208ENST00000486159 ROBO1Q9Y6N7 1651 aa14.24□□□□□ -0.13
TMEM39A-208ENST00000486159 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
TMEM39A-208ENST00000486159 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
TMEM39A-208ENST00000486159 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
TMEM39A-208ENST00000486159 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
TMEM39A-208ENST00000486159 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
TMEM39A-208ENST00000486159 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
TMEM39A-208ENST00000486159 PTPRUQ92729 1446 aa14.2□□□□□ -0.14
TMEM39A-208ENST00000486159 SLAIN2Q9P270 581 aa14.19□□□□□ -0.14
TMEM39A-208ENST00000486159 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
TMEM39A-208ENST00000486159 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
TMEM39A-208ENST00000486159 MSH6P52701 1360 aa14.18□□□□□ -0.14
TMEM39A-208ENST00000486159 POTEAQ6S8J7 498 aa14.17□□□□□ -0.14
TMEM39A-208ENST00000486159 SPHKAPQ2M3C7 1700 aa14.17□□□□□ -0.14
TMEM39A-208ENST00000486159 NRXN3Q9Y4C0 1643 aa14.16□□□□□ -0.14
TMEM39A-208ENST00000486159 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
TMEM39A-208ENST00000486159 NAIPQ13075 1403 aa14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
TMEM39A-208ENST00000486159 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
TMEM39A-208ENST00000486159 METP08581 1390 aa14.13□□□□□ -0.15
TMEM39A-208ENST00000486159 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
TMEM39A-208ENST00000486159 TRIM52Q96A61 297 aa14.11□□□□□ -0.15
TMEM39A-208ENST00000486159 COL16A1Q07092 1604 aaPredicted RBP14.11□□□□□ -0.15
TMEM39A-208ENST00000486159 TRPM2O94759 1503 aa14.1□□□□□ -0.15
TMEM39A-208ENST00000486159 C19orf44Q9H6X5 657 aa14.1□□□□□ -0.15
TMEM39A-208ENST00000486159 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
TMEM39A-208ENST00000486159 ATF3P18847 181 aa14.09□□□□□ -0.15
TMEM39A-208ENST00000486159 XRN1Q8IZH2 1706 aaKnown RBP14.09□□□□□ -0.15
TMEM39A-208ENST00000486159 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
TMEM39A-208ENST00000486159 PIK3R4Q99570 1358 aa14.09□□□□□ -0.15
TMEM39A-208ENST00000486159 LRP6O75581 1613 aa14.08□□□□□ -0.15
TMEM39A-208ENST00000486159 DDX17Q92841 729 aaKnown RBP14.08□□□□□ -0.16
TMEM39A-208ENST00000486159 NCOA3Q9Y6Q9 1424 aa14.07□□□□□ -0.16
TMEM39A-208ENST00000486159 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
TMEM39A-208ENST00000486159 CADPS2Q86UW7 1296 aa14.07□□□□□ -0.16
TMEM39A-208ENST00000486159 JCADQ9P266 1359 aa14.07□□□□□ -0.16
TMEM39A-208ENST00000486159 KIF1BO60333 1816 aa14.06□□□□□ -0.16
TMEM39A-208ENST00000486159 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
TMEM39A-208ENST00000486159 SRCAPQ6ZRS2 3230 aa14.04□□□□□ -0.16
TMEM39A-208ENST00000486159 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
TMEM39A-208ENST00000486159 MST1RQ04912 1400 aa14.04□□□□□ -0.16
TMEM39A-208ENST00000486159 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
TMEM39A-208ENST00000486159 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.16
TMEM39A-208ENST00000486159 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
TMEM39A-208ENST00000486159 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
TMEM39A-208ENST00000486159 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
TMEM39A-208ENST00000486159 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
TMEM39A-208ENST00000486159 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
TMEM39A-208ENST00000486159 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
TMEM39A-208ENST00000486159 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
TMEM39A-208ENST00000486159 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 PPLO60437 1756 aa13.98□□□□□ -0.17
TMEM39A-208ENST00000486159 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
TMEM39A-208ENST00000486159 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
TMEM39A-208ENST00000486159 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
TMEM39A-208ENST00000486159 DCCP43146 1447 aa13.97□□□□□ -0.17
TMEM39A-208ENST00000486159 MPHOSPH9Q99550 1183 aa13.96□□□□□ -0.17
TMEM39A-208ENST00000486159 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
TMEM39A-208ENST00000486159 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
TMEM39A-208ENST00000486159 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms