RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
RTN4-214ENST00000486085 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
RTN4-214ENST00000486085 ADGRD1Q6QNK2 874 aa12.62□□□□□ -0.39
RTN4-214ENST00000486085 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
RTN4-214ENST00000486085 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
RTN4-214ENST00000486085 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
RTN4-214ENST00000486085 LAPTM4BQ86VI4 370 aa12.59□□□□□ -0.39
RTN4-214ENST00000486085 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
RTN4-214ENST00000486085 RDH13Q8NBN7 331 aa12.57□□□□□ -0.4
RTN4-214ENST00000486085 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
RTN4-214ENST00000486085 CD46P15529 392 aa12.56□□□□□ -0.4
RTN4-214ENST00000486085 SAMD7Q7Z3H4 446 aa12.56□□□□□ -0.4
RTN4-214ENST00000486085 HRO43593 1189 aa12.55□□□□□ -0.4
RTN4-214ENST00000486085 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
RTN4-214ENST00000486085 KRTAP3-3Q9BYR6 98 aa12.53□□□□□ -0.4
RTN4-214ENST00000486085 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
RTN4-214ENST00000486085 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
RTN4-214ENST00000486085 RNF40O75150 1001 aa12.52□□□□□ -0.41
RTN4-214ENST00000486085 SLC4A3P48751 1232 aa12.52□□□□□ -0.41
RTN4-214ENST00000486085 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.41
RTN4-214ENST00000486085 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
RTN4-214ENST00000486085 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
RTN4-214ENST00000486085 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
RTN4-214ENST00000486085 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
RTN4-214ENST00000486085 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
RTN4-214ENST00000486085 SLC10A3P09131 477 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
RTN4-214ENST00000486085 POTEMA6NI47 508 aa12.49□□□□□ -0.41
RTN4-214ENST00000486085 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
RTN4-214ENST00000486085 MYSM1Q5VVJ2 828 aa12.49□□□□□ -0.41
RTN4-214ENST00000486085 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
RTN4-214ENST00000486085 LRCH3Q96II8 777 aa12.48□□□□□ -0.41
RTN4-214ENST00000486085 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
RTN4-214ENST00000486085 CDAN1Q8IWY9 1227 aa12.47□□□□□ -0.41
RTN4-214ENST00000486085 GCGRP47871 477 aa12.46□□□□□ -0.41
RTN4-214ENST00000486085 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
RTN4-214ENST00000486085 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
RTN4-214ENST00000486085 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
RTN4-214ENST00000486085 KDM4AO75164 1064 aa12.44□□□□□ -0.42
RTN4-214ENST00000486085 CFHP08603 1231 aa12.42□□□□□ -0.42
RTN4-214ENST00000486085 CLK2P49760 499 aaKnown RBP12.42□□□□□ -0.42
RTN4-214ENST00000486085 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
RTN4-214ENST00000486085 WNT2BQ93097 391 aa12.42□□□□□ -0.42
RTN4-214ENST00000486085 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
RTN4-214ENST00000486085 NDUFV2P19404 249 aa12.41□□□□□ -0.42
RTN4-214ENST00000486085 BCAMP50895 628 aa12.41□□□□□ -0.42
RTN4-214ENST00000486085 SOWAHBA6NEL2 793 aa12.4□□□□□ -0.42
RTN4-214ENST00000486085 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.42
RTN4-214ENST00000486085 PPP4CP60510 307 aa12.38□□□□□ -0.43
RTN4-214ENST00000486085 USP46P62068 366 aa12.38□□□□□ -0.43
RTN4-214ENST00000486085 HPS5Q9UPZ3 1129 aa12.38□□□□□ -0.43
RTN4-214ENST00000486085 SPTLC1O15269 473 aa12.37□□□□□ -0.43
RTN4-214ENST00000486085 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
RTN4-214ENST00000486085 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
RTN4-214ENST00000486085 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
RTN4-214ENST00000486085 HOXA2O43364 376 aa12.36□□□□□ -0.43
RTN4-214ENST00000486085 FUT2Q10981 343 aa12.36□□□□□ -0.43
RTN4-214ENST00000486085 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
RTN4-214ENST00000486085 HLA-CQ95604 372 aa12.35□□□□□ -0.43
RTN4-214ENST00000486085 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
RTN4-214ENST00000486085 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
RTN4-214ENST00000486085 GUCA2AQ02747 115 aa12.34□□□□□ -0.43
RTN4-214ENST00000486085 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
RTN4-214ENST00000486085 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
RTN4-214ENST00000486085 FDX1P10109 184 aa12.33□□□□□ -0.44
RTN4-214ENST00000486085 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
RTN4-214ENST00000486085 GJA5P36382 358 aa12.32□□□□□ -0.44
RTN4-214ENST00000486085 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
RTN4-214ENST00000486085 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
RTN4-214ENST00000486085 TUSC1Q2TAM9 212 aa12.31□□□□□ -0.44
RTN4-214ENST00000486085 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
RTN4-214ENST00000486085 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
RTN4-214ENST00000486085 PUS10Q3MIT2 529 aaKnown RBP12.3□□□□□ -0.44
RTN4-214ENST00000486085 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
RTN4-214ENST00000486085 WBP1LQ9NX94 342 aa12.3□□□□□ -0.44
RTN4-214ENST00000486085 APLP1P51693 650 aa12.29□□□□□ -0.44
RTN4-214ENST00000486085 QPCTQ16769 361 aa12.29□□□□□ -0.44
RTN4-214ENST00000486085 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
RTN4-214ENST00000486085 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
RTN4-214ENST00000486085 PCDHGC3Q9UN70 934 aa12.29□□□□□ -0.44
RTN4-214ENST00000486085 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
RTN4-214ENST00000486085 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
RTN4-214ENST00000486085 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
RTN4-214ENST00000486085 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
RTN4-214ENST00000486085 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
RTN4-214ENST00000486085 LILRB3O75022 631 aa12.26□□□□□ -0.45
RTN4-214ENST00000486085 RFC5P40937 340 aa12.26□□□□□ -0.45
RTN4-214ENST00000486085 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
RTN4-214ENST00000486085 PTPN5P54829 565 aa12.25□□□□□ -0.45
RTN4-214ENST00000486085 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
RTN4-214ENST00000486085 MORN1Q5T089 497 aa12.25□□□□□ -0.45
RTN4-214ENST00000486085 PPP2R2DQ66LE6 453 aa12.25□□□□□ -0.45
RTN4-214ENST00000486085 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
RTN4-214ENST00000486085 HRCP23327 699 aa12.24□□□□□ -0.45
RTN4-214ENST00000486085 PRPF38BQ5VTL8 546 aaKnown RBP12.24□□□□□ -0.45
RTN4-214ENST00000486085 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms