RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 VGFO15240 615 aaPredicted RBP22.5■■□□□ 1.19
HDHD3-203ENST00000485934 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
HDHD3-203ENST00000485934 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
HDHD3-203ENST00000485934 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
HDHD3-203ENST00000485934 CLTCL1P53675 1640 aa22.45■■□□□ 1.18
HDHD3-203ENST00000485934 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
HDHD3-203ENST00000485934 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
HDHD3-203ENST00000485934 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
HDHD3-203ENST00000485934 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
HDHD3-203ENST00000485934 TBX22Q9Y458 520 aa22.42■■□□□ 1.18
HDHD3-203ENST00000485934 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
HDHD3-203ENST00000485934 STAC3Q96MF2 364 aa22.41■■□□□ 1.18
HDHD3-203ENST00000485934 SLC26A8Q96RN1 970 aa22.4■■□□□ 1.18
HDHD3-203ENST00000485934 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
HDHD3-203ENST00000485934 IQGAP1P46940 1657 aa22.39■■□□□ 1.17
HDHD3-203ENST00000485934 KIF1BO60333 1816 aa22.38■■□□□ 1.17
HDHD3-203ENST00000485934 CERKQ8TCT0 537 aa22.37■■□□□ 1.17
HDHD3-203ENST00000485934 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
HDHD3-203ENST00000485934 KCNA6P17658 529 aa22.35■■□□□ 1.17
HDHD3-203ENST00000485934 PIK3R4Q99570 1358 aa22.34■■□□□ 1.17
HDHD3-203ENST00000485934 CPS1P31327 1500 aa22.31■■□□□ 1.16
HDHD3-203ENST00000485934 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
HDHD3-203ENST00000485934 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
HDHD3-203ENST00000485934 MYO5BQ9ULV0 1848 aa22.3■■□□□ 1.16
HDHD3-203ENST00000485934 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
HDHD3-203ENST00000485934 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
HDHD3-203ENST00000485934 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
HDHD3-203ENST00000485934 LTBP4Q8N2S1 1624 aa22.27■■□□□ 1.16
HDHD3-203ENST00000485934 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
HDHD3-203ENST00000485934 IQSEC2Q5JU85 1478 aa22.26■■□□□ 1.15
HDHD3-203ENST00000485934 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
HDHD3-203ENST00000485934 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
HDHD3-203ENST00000485934 ADGRF5Q8IZF2 1346 aa22.25■■□□□ 1.15
HDHD3-203ENST00000485934 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
HDHD3-203ENST00000485934 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
HDHD3-203ENST00000485934 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
HDHD3-203ENST00000485934 FBXO41Q8TF61 875 aa22.2■■□□□ 1.14
HDHD3-203ENST00000485934 MYOM2P54296 1465 aa22.2■■□□□ 1.14
HDHD3-203ENST00000485934 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
HDHD3-203ENST00000485934 C14orf93Q9H972 538 aaKnown RBP22.19■■□□□ 1.14
HDHD3-203ENST00000485934 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
HDHD3-203ENST00000485934 NKTRP30414 1462 aaKnown RBP22.19■■□□□ 1.14
HDHD3-203ENST00000485934 METP08581 1390 aa22.18■■□□□ 1.14
HDHD3-203ENST00000485934 TOM1O60784 492 aa22.18■■□□□ 1.14
HDHD3-203ENST00000485934 PPLO60437 1756 aa22.17■■□□□ 1.14
HDHD3-203ENST00000485934 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
HDHD3-203ENST00000485934 NCOA3Q9Y6Q9 1424 aa22.17■■□□□ 1.14
HDHD3-203ENST00000485934 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
HDHD3-203ENST00000485934 TMEM94Q12767 1356 aa22.14■■□□□ 1.14
HDHD3-203ENST00000485934 ALKQ9UM73 1620 aa22.14■■□□□ 1.14
HDHD3-203ENST00000485934 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
HDHD3-203ENST00000485934 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
HDHD3-203ENST00000485934 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
HDHD3-203ENST00000485934 L3MBTL2Q969R5 705 aa22.13■■□□□ 1.13
HDHD3-203ENST00000485934 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
HDHD3-203ENST00000485934 CFAP70Q5T0N1 1121 aa22.12■■□□□ 1.13
HDHD3-203ENST00000485934 NRXN3Q9Y4C0 1643 aa22.11■■□□□ 1.13
HDHD3-203ENST00000485934 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
HDHD3-203ENST00000485934 CCER1Q8TC90 406 aaPredicted RBP22.1■■□□□ 1.13
HDHD3-203ENST00000485934 C19orf44Q9H6X5 657 aa22.1■■□□□ 1.13
HDHD3-203ENST00000485934 MSH6P52701 1360 aa22.1■■□□□ 1.13
HDHD3-203ENST00000485934 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
HDHD3-203ENST00000485934 IFT172Q9UG01 1749 aa22.09■■□□□ 1.13
HDHD3-203ENST00000485934 TMEM132EQ6IEE7 984 aa22.08■■□□□ 1.13
HDHD3-203ENST00000485934 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
HDHD3-203ENST00000485934 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
HDHD3-203ENST00000485934 LRPPRCP42704 1394 aaKnown RBP22.08■■□□□ 1.12
HDHD3-203ENST00000485934 ABCC11Q96J66 1382 aa22.08■■□□□ 1.12
HDHD3-203ENST00000485934 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.12
HDHD3-203ENST00000485934 ILDR1Q86SU0 546 aaPredicted RBP22.07■■□□□ 1.12
HDHD3-203ENST00000485934 STK26Q9P289 416 aa22.07■■□□□ 1.12
HDHD3-203ENST00000485934 CADPS2Q86UW7 1296 aa22.06■■□□□ 1.12
HDHD3-203ENST00000485934 ATF3P18847 181 aa22.05■■□□□ 1.12
HDHD3-203ENST00000485934 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
HDHD3-203ENST00000485934 PRAG1Q86YV5 1406 aa22.05■■□□□ 1.12
HDHD3-203ENST00000485934 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
HDHD3-203ENST00000485934 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
HDHD3-203ENST00000485934 LAMC1P11047 1609 aa22.03■■□□□ 1.12
HDHD3-203ENST00000485934 YTHDC2Q9H6S0 1430 aaKnown RBP22.03■■□□□ 1.12
HDHD3-203ENST00000485934 TECPR2O15040 1411 aa22■■□□□ 1.11
HDHD3-203ENST00000485934 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
HDHD3-203ENST00000485934 POGKQ9P215 609 aa21.99■■□□□ 1.11
HDHD3-203ENST00000485934 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
HDHD3-203ENST00000485934 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
HDHD3-203ENST00000485934 FAM135BQ49AJ0 1406 aa21.98■■□□□ 1.11
HDHD3-203ENST00000485934 PIP4K2BP78356 416 aa21.98■■□□□ 1.11
HDHD3-203ENST00000485934 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
HDHD3-203ENST00000485934 DCCP43146 1447 aa21.97■■□□□ 1.11
HDHD3-203ENST00000485934 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
HDHD3-203ENST00000485934 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
HDHD3-203ENST00000485934 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
HDHD3-203ENST00000485934 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
HDHD3-203ENST00000485934 PRAM1Q96QH2 718 aa21.93■■□□□ 1.1
HDHD3-203ENST00000485934 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
HDHD3-203ENST00000485934 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
HDHD3-203ENST00000485934 ASXL1Q8IXJ9 1541 aa21.9■■□□□ 1.1
HDHD3-203ENST00000485934 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
HDHD3-203ENST00000485934 DLC1Q96QB1 1528 aa21.9■■□□□ 1.1
HDHD3-203ENST00000485934 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.09
HDHD3-203ENST00000485934 NBPF8Q3BBV2 869 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms