RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 NUTM1Q86Y26 1132 aa7.84□□□□□ -1.15
FN1-222ENST00000485567 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
FN1-222ENST00000485567 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
FN1-222ENST00000485567 SLC4A5Q9BY07 1137 aa7.84□□□□□ -1.15
FN1-222ENST00000485567 DDX11L8A8MPP1 907 aa7.83□□□□□ -1.16
FN1-222ENST00000485567 SPDYE5A6NIY4 337 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 TRAK2O60296 914 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 RFC5P40937 340 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 PROX2Q3B8N5 592 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 RSPH4AQ5TD94 716 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
FN1-222ENST00000485567 OTUD5Q96G74 571 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 KIAA1468Q9P260 1216 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 LIMD1Q9UGP4 676 aa7.82□□□□□ -1.16
FN1-222ENST00000485567 SMAPO00193 183 aa7.8□□□□□ -1.16
FN1-222ENST00000485567 ARHGAP33O14559 1287 aa7.8□□□□□ -1.16
FN1-222ENST00000485567 CLUAP1Q96AJ1 413 aa7.8□□□□□ -1.16
FN1-222ENST00000485567 RABGEF1Q9UJ41 708 aa7.8□□□□□ -1.16
FN1-222ENST00000485567 MOXD2PA6NHM9 499 aa7.79□□□□□ -1.16
FN1-222ENST00000485567 RAD21O60216 631 aa7.79□□□□□ -1.16
FN1-222ENST00000485567 GCGRP47871 477 aa7.79□□□□□ -1.16
FN1-222ENST00000485567 USP46P62068 366 aa7.79□□□□□ -1.16
FN1-222ENST00000485567 C1orf115Q9H7X2 142 aa7.79□□□□□ -1.16
FN1-222ENST00000485567 APBB1O00213 710 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 SOCS7O14512 581 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 LILRB3O75022 631 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 KDM4AO75164 1064 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 PBX2P40425 430 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 FBXO31Q5XUX0 539 aaPredicted RBP7.78□□□□□ -1.16
FN1-222ENST00000485567 RDH13Q8NBN7 331 aa7.78□□□□□ -1.16
FN1-222ENST00000485567 PSEN2P49810 448 aa7.77□□□□□ -1.17
FN1-222ENST00000485567 PRPF38BQ5VTL8 546 aaKnown RBP7.77□□□□□ -1.17
FN1-222ENST00000485567 FNBP4Q8N3X1 1017 aaPredicted RBP7.77□□□□□ -1.17
FN1-222ENST00000485567 ERBB3P21860 1342 aa7.77□□□□□ -1.17
FN1-222ENST00000485567 NDUFV2P19404 249 aa7.76□□□□□ -1.17
FN1-222ENST00000485567 HDGFP51858 240 aaKnown RBP7.76□□□□□ -1.17
FN1-222ENST00000485567 PROSER2Q86WR7 435 aaPredicted RBP7.76□□□□□ -1.17
FN1-222ENST00000485567 SNRKQ9NRH2 765 aa7.76□□□□□ -1.17
FN1-222ENST00000485567 ARID3CA6NKF2 412 aa7.75□□□□□ -1.17
FN1-222ENST00000485567 SLC10A3P09131 477 aa7.75□□□□□ -1.17
FN1-222ENST00000485567 VARS2Q5ST30 1063 aaKnown RBP7.75□□□□□ -1.17
FN1-222ENST00000485567 SWT1Q5T5J6 900 aaKnown RBP7.75□□□□□ -1.17
FN1-222ENST00000485567 POTEEQ6S8J3 1075 aa7.75□□□□□ -1.17
FN1-222ENST00000485567 PCDHB15Q9Y5E8 787 aa7.75□□□□□ -1.17
FN1-222ENST00000485567 SLC4A3P48751 1232 aa7.74□□□□□ -1.17
FN1-222ENST00000485567 FAM98CQ17RN3 349 aaKnown RBP7.74□□□□□ -1.17
FN1-222ENST00000485567 LAPTM4BQ86VI4 370 aa7.74□□□□□ -1.17
FN1-222ENST00000485567 POM121Q96HA1 1249 aa7.74□□□□□ -1.17
FN1-222ENST00000485567 COG6Q9Y2V7 657 aa7.74□□□□□ -1.17
FN1-222ENST00000485567 HOXA2O43364 376 aa7.73□□□□□ -1.17
FN1-222ENST00000485567 QPCTQ16769 361 aa7.73□□□□□ -1.17
FN1-222ENST00000485567 SLF2Q8IX21 1173 aa7.73□□□□□ -1.17
FN1-222ENST00000485567 FDX1P10109 184 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 CSPP1Q1MSJ5 1256 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
FN1-222ENST00000485567 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 ZNF687Q8N1G0 1237 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 MTMR14Q8NCE2 650 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 VPS9D1Q9Y2B5 631 aa7.72□□□□□ -1.17
FN1-222ENST00000485567 NUTM2BA6NNL0 878 aaPredicted RBP7.71□□□□□ -1.18
FN1-222ENST00000485567 NUTM2EB1AL46 878 aaPredicted RBP7.71□□□□□ -1.18
FN1-222ENST00000485567 ST18O60284 1047 aa7.71□□□□□ -1.18
FN1-222ENST00000485567 NUTM2DQ5VT03 806 aaPredicted RBP7.71□□□□□ -1.18
FN1-222ENST00000485567 LHX8Q68G74 356 aa7.71□□□□□ -1.18
FN1-222ENST00000485567 NUTM2AQ8IVF1 878 aaPredicted RBP7.71□□□□□ -1.18
FN1-222ENST00000485567 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
FN1-222ENST00000485567 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
FN1-222ENST00000485567 TK2O00142 265 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 AP1G2O75843 785 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 HRCP23327 699 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 EMP3P54852 163 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 ARID3AQ99856 593 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 NBPF3Q9H094 633 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 ZNF777Q9ULD5 760 aaPredicted RBP7.7□□□□□ -1.18
FN1-222ENST00000485567 AXIN2Q9Y2T1 843 aa7.7□□□□□ -1.18
FN1-222ENST00000485567 BHMG1C9JSJ3 638 aaPredicted RBP7.69□□□□□ -1.18
FN1-222ENST00000485567 CABLES1Q8TDN4 633 aa7.69□□□□□ -1.18
FN1-222ENST00000485567 WWC1Q8IX03 1113 aa7.68□□□□□ -1.18
FN1-222ENST00000485567 PCDHGC3Q9UN70 934 aa7.68□□□□□ -1.18
FN1-222ENST00000485567 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
FN1-222ENST00000485567 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
FN1-222ENST00000485567 NECTIN2Q92692 538 aa7.67□□□□□ -1.18
FN1-222ENST00000485567 GDPD2Q9HCC8 539 aa7.67□□□□□ -1.18
FN1-222ENST00000485567 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
FN1-222ENST00000485567 ZNF330Q9Y3S2 320 aaPredicted RBP7.67□□□□□ -1.18
FN1-222ENST00000485567 USP17L8P0C7I0 530 aa7.66□□□□□ -1.18
FN1-222ENST00000485567 ATP6V1AP38606 617 aa7.66□□□□□ -1.18
FN1-222ENST00000485567 MTMR2Q13614 643 aa7.66□□□□□ -1.18
FN1-222ENST00000485567 FAM205CA6NFA0 338 aa7.65□□□□□ -1.18
FN1-222ENST00000485567 FUT2Q10981 343 aa7.65□□□□□ -1.18
FN1-222ENST00000485567 MARVELD3Q96A59 401 aa7.65□□□□□ -1.18
FN1-222ENST00000485567 ZFRQ96KR1 1074 aaKnown RBP7.65□□□□□ -1.18
FN1-222ENST00000485567 PLSCR2Q9NRY7 297 aa7.65□□□□□ -1.18
FN1-222ENST00000485567 CFHP08603 1231 aa7.64□□□□□ -1.19
FN1-222ENST00000485567 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
FN1-222ENST00000485567 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
FN1-222ENST00000485567 HLA-CQ95604 372 aa7.64□□□□□ -1.19
FN1-222ENST00000485567 MRPL50Q8N5N7 158 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms