RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 RCCD1A6NED2 376 aa8.25□□□□□ -1.09
SFPQ-209ENST00000485454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
SFPQ-209ENST00000485454 METTL3Q86U44 580 aaKnown RBP8.24□□□□□ -1.09
SFPQ-209ENST00000485454 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
SFPQ-209ENST00000485454 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
SFPQ-209ENST00000485454 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
SFPQ-209ENST00000485454 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
SFPQ-209ENST00000485454 NECTIN2Q92692 538 aa8.22□□□□□ -1.09
SFPQ-209ENST00000485454 BCANQ96GW7 911 aa8.21□□□□□ -1.1
SFPQ-209ENST00000485454 MINK1Q8N4C8 1332 aaPredicted RBP8.21□□□□□ -1.1
SFPQ-209ENST00000485454 TJAP1Q5JTD0 557 aa8.2□□□□□ -1.1
SFPQ-209ENST00000485454 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
SFPQ-209ENST00000485454 MTRQ99707 1265 aa8.2□□□□□ -1.1
SFPQ-209ENST00000485454 IL21Q9HBE4 155 aa8.2□□□□□ -1.1
SFPQ-209ENST00000485454 IRF6O14896 467 aa8.19□□□□□ -1.1
SFPQ-209ENST00000485454 ZMYND10O75800 440 aa8.17□□□□□ -1.1
SFPQ-209ENST00000485454 APLP1P51693 650 aa8.17□□□□□ -1.1
SFPQ-209ENST00000485454 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
SFPQ-209ENST00000485454 BARGINQ6ZT62 677 aa8.16□□□□□ -1.1
SFPQ-209ENST00000485454 CCDC102AQ96A19 550 aa8.16□□□□□ -1.1
SFPQ-209ENST00000485454 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
SFPQ-209ENST00000485454 Q6ZNB5 142 aa8.15□□□□□ -1.1
SFPQ-209ENST00000485454 KRI1Q8N9T8 703 aaKnown RBP8.15□□□□□ -1.1
SFPQ-209ENST00000485454 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
SFPQ-209ENST00000485454 PPP1R18Q6NYC8 613 aa8.14□□□□□ -1.11
SFPQ-209ENST00000485454 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
SFPQ-209ENST00000485454 PRR14Q9BWN1 585 aa8.14□□□□□ -1.11
SFPQ-209ENST00000485454 SLC10A3P09131 477 aa8.13□□□□□ -1.11
SFPQ-209ENST00000485454 RSPH4AQ5TD94 716 aa8.13□□□□□ -1.11
SFPQ-209ENST00000485454 COPS2P61201 443 aa8.12□□□□□ -1.11
SFPQ-209ENST00000485454 KMT5BQ4FZB7 885 aa8.12□□□□□ -1.11
SFPQ-209ENST00000485454 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
SFPQ-209ENST00000485454 CFHP08603 1231 aa8.11□□□□□ -1.11
SFPQ-209ENST00000485454 SULF1Q8IWU6 871 aa8.11□□□□□ -1.11
SFPQ-209ENST00000485454 PRKD2Q9BZL6 878 aa8.11□□□□□ -1.11
SFPQ-209ENST00000485454 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.11□□□□□ -1.11
SFPQ-209ENST00000485454 LAPTM4AQ15012 233 aa8.1□□□□□ -1.11
SFPQ-209ENST00000485454 RDH13Q8NBN7 331 aa8.1□□□□□ -1.11
SFPQ-209ENST00000485454 ACTN4O43707 911 aaKnown RBP8.09□□□□□ -1.11
SFPQ-209ENST00000485454 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
SFPQ-209ENST00000485454 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
SFPQ-209ENST00000485454 PCDHB3Q9Y5E6 796 aa8.09□□□□□ -1.11
SFPQ-209ENST00000485454 GFRA3O60609 400 aa8.08□□□□□ -1.12
SFPQ-209ENST00000485454 GGCXP38435 758 aa8.08□□□□□ -1.12
SFPQ-209ENST00000485454 ZPR1O75312 459 aa8.07□□□□□ -1.12
SFPQ-209ENST00000485454 CLCN1P35523 988 aa8.07□□□□□ -1.12
SFPQ-209ENST00000485454 GPCPD1Q9NPB8 672 aa8.07□□□□□ -1.12
SFPQ-209ENST00000485454 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
SFPQ-209ENST00000485454 CD46P15529 392 aa8.05□□□□□ -1.12
SFPQ-209ENST00000485454 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
SFPQ-209ENST00000485454 AK7Q96M32 723 aa8.05□□□□□ -1.12
SFPQ-209ENST00000485454 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
SFPQ-209ENST00000485454 GCGRP47871 477 aa8.04□□□□□ -1.12
SFPQ-209ENST00000485454 AMHR2Q16671 573 aa8.04□□□□□ -1.12
SFPQ-209ENST00000485454 SLC24A3Q9HC58 644 aa8.03□□□□□ -1.12
SFPQ-209ENST00000485454 FAM217BQ9NTX9 383 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-209ENST00000485454 NRG2O14511 850 aaPredicted RBP8.02□□□□□ -1.13
SFPQ-209ENST00000485454 TRIM66O15016 1216 aa8.02□□□□□ -1.13
SFPQ-209ENST00000485454 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
SFPQ-209ENST00000485454 REPIN1Q9BWE0 567 aaKnown RBP8.02□□□□□ -1.13
SFPQ-209ENST00000485454 NR1I2O75469 434 aa8.01□□□□□ -1.13
SFPQ-209ENST00000485454 FUT2Q10981 343 aa8.01□□□□□ -1.13
SFPQ-209ENST00000485454 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
SFPQ-209ENST00000485454 TLL1O43897 1013 aa8□□□□□ -1.13
SFPQ-209ENST00000485454 ATP6V1AP38606 617 aa8□□□□□ -1.13
SFPQ-209ENST00000485454 TRAF7Q6Q0C0 670 aa8□□□□□ -1.13
SFPQ-209ENST00000485454 SSTR3P32745 418 aaPredicted RBP7.99□□□□□ -1.13
SFPQ-209ENST00000485454 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
SFPQ-209ENST00000485454 MORN1Q5T089 497 aa7.99□□□□□ -1.13
SFPQ-209ENST00000485454 SCUBE3Q8IX30 993 aa7.99□□□□□ -1.13
SFPQ-209ENST00000485454 RNF223E7ERA6 249 aa7.98□□□□□ -1.13
SFPQ-209ENST00000485454 KDM4AO75164 1064 aa7.98□□□□□ -1.13
SFPQ-209ENST00000485454 GIGYF2Q6Y7W6 1299 aaKnown RBP7.98□□□□□ -1.13
SFPQ-209ENST00000485454 PDZRN3Q9UPQ7 1066 aa7.98□□□□□ -1.13
SFPQ-209ENST00000485454 LCE2BO14633 110 aa7.97□□□□□ -1.13
SFPQ-209ENST00000485454 PARP9Q8IXQ6 854 aa7.97□□□□□ -1.13
SFPQ-209ENST00000485454 USP46P62068 366 aa7.96□□□□□ -1.14
SFPQ-209ENST00000485454 PDE4DQ08499 809 aa7.96□□□□□ -1.14
SFPQ-209ENST00000485454 S1PR4O95977 384 aa7.95□□□□□ -1.14
SFPQ-209ENST00000485454 ADH1BP00325 375 aa7.95□□□□□ -1.14
SFPQ-209ENST00000485454 SLC27A5Q9Y2P5 690 aa7.95□□□□□ -1.14
SFPQ-209ENST00000485454 SLC19A1P41440 591 aa7.94□□□□□ -1.14
SFPQ-209ENST00000485454 NUTM1Q86Y26 1132 aa7.94□□□□□ -1.14
SFPQ-209ENST00000485454 ANKLE1Q8NAG6 615 aa7.94□□□□□ -1.14
SFPQ-209ENST00000485454 PPEF1O14829 653 aaPredicted RBP7.93□□□□□ -1.14
SFPQ-209ENST00000485454 FMNL1O95466 1100 aaPredicted RBP7.93□□□□□ -1.14
SFPQ-209ENST00000485454 SPSB2Q99619 263 aa7.93□□□□□ -1.14
SFPQ-209ENST00000485454 SALL2Q9Y467 1007 aaPredicted RBP7.93□□□□□ -1.14
SFPQ-209ENST00000485454 HOXA2O43364 376 aa7.92□□□□□ -1.14
SFPQ-209ENST00000485454 THAP11Q96EK4 314 aa7.92□□□□□ -1.14
SFPQ-209ENST00000485454 BEGAINQ9BUH8 593 aa7.92□□□□□ -1.14
SFPQ-209ENST00000485454 MS4A1P11836 297 aa7.91□□□□□ -1.14
SFPQ-209ENST00000485454 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
SFPQ-209ENST00000485454 EMID1Q96A84 441 aaPredicted RBP7.91□□□□□ -1.14
SFPQ-209ENST00000485454 SLC6A16Q9GZN6 736 aa7.91□□□□□ -1.14
SFPQ-209ENST00000485454 Q3C1V9 767 aa7.9□□□□□ -1.14
SFPQ-209ENST00000485454 BRICD5Q6PL45 260 aa7.9□□□□□ -1.14
SFPQ-209ENST00000485454 SPIRE2Q8WWL2 714 aa7.9□□□□□ -1.14
SFPQ-209ENST00000485454 HLA-CQ95604 372 aa7.9□□□□□ -1.14
SFPQ-209ENST00000485454 RNF19BQ6ZMZ0 732 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms