RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
SRRM1-213ENST00000485441 DDX11L8A8MPP1 907 aa10.17□□□□□ -0.78
SRRM1-213ENST00000485441 SPTLC1O15269 473 aa10.17□□□□□ -0.78
SRRM1-213ENST00000485441 ST18O60284 1047 aa10.17□□□□□ -0.78
SRRM1-213ENST00000485441 PPP2R2DQ66LE6 453 aa10.17□□□□□ -0.78
SRRM1-213ENST00000485441 ERBB3P21860 1342 aa10.16□□□□□ -0.78
SRRM1-213ENST00000485441 MCM6Q14566 821 aa10.16□□□□□ -0.78
SRRM1-213ENST00000485441 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
SRRM1-213ENST00000485441 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
SRRM1-213ENST00000485441 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
SRRM1-213ENST00000485441 RABGEF1Q9UJ41 708 aa10.16□□□□□ -0.78
SRRM1-213ENST00000485441 A6NJR5 290 aa10.14□□□□□ -0.79
SRRM1-213ENST00000485441 GJA5P36382 358 aa10.14□□□□□ -0.79
SRRM1-213ENST00000485441 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
SRRM1-213ENST00000485441 MOXD2PA6NHM9 499 aa10.13□□□□□ -0.79
SRRM1-213ENST00000485441 SLC10A3P09131 477 aa10.13□□□□□ -0.79
SRRM1-213ENST00000485441 RFC5P40937 340 aa10.13□□□□□ -0.79
SRRM1-213ENST00000485441 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
SRRM1-213ENST00000485441 AXIN2Q9Y2T1 843 aa10.13□□□□□ -0.79
SRRM1-213ENST00000485441 GCGRP47871 477 aa10.12□□□□□ -0.79
SRRM1-213ENST00000485441 ZNF687Q8N1G0 1237 aa10.12□□□□□ -0.79
SRRM1-213ENST00000485441 BANK1Q8NDB2 785 aa10.12□□□□□ -0.79
SRRM1-213ENST00000485441 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 NDUFV2P19404 249 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 NUTM1Q86Y26 1132 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 CLUAP1Q96AJ1 413 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 VPS9D1Q9Y2B5 631 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
SRRM1-213ENST00000485441 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-213ENST00000485441 PBX2P40425 430 aa10.1□□□□□ -0.79
SRRM1-213ENST00000485441 SWT1Q5T5J6 900 aaKnown RBP10.1□□□□□ -0.79
SRRM1-213ENST00000485441 LILRB3O75022 631 aa10.09□□□□□ -0.79
SRRM1-213ENST00000485441 MARVELD3Q96A59 401 aa10.09□□□□□ -0.79
SRRM1-213ENST00000485441 SEPT9Q9UHD8 586 aaPredicted RBP10.09□□□□□ -0.79
SRRM1-213ENST00000485441 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
SRRM1-213ENST00000485441 KDM4AO75164 1064 aa10.08□□□□□ -0.8
SRRM1-213ENST00000485441 TMEM259Q4ZIN3 620 aa10.08□□□□□ -0.8
SRRM1-213ENST00000485441 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
SRRM1-213ENST00000485441 TRAK2O60296 914 aa10.07□□□□□ -0.8
SRRM1-213ENST00000485441 EMP3P54852 163 aa10.07□□□□□ -0.8
SRRM1-213ENST00000485441 QPCTQ16769 361 aa10.07□□□□□ -0.8
SRRM1-213ENST00000485441 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
SRRM1-213ENST00000485441 RDH13Q8NBN7 331 aa10.07□□□□□ -0.8
SRRM1-213ENST00000485441 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-213ENST00000485441 UBTFP17480 764 aaKnown RBP10.06□□□□□ -0.8
SRRM1-213ENST00000485441 USP46P62068 366 aa10.06□□□□□ -0.8
SRRM1-213ENST00000485441 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-213ENST00000485441 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
SRRM1-213ENST00000485441 HOXA2O43364 376 aa10.05□□□□□ -0.8
SRRM1-213ENST00000485441 RTL5Q5HYW3 569 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-213ENST00000485441 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
SRRM1-213ENST00000485441 LAPTM4BQ86VI4 370 aa10.05□□□□□ -0.8
SRRM1-213ENST00000485441 POM121Q96HA1 1249 aa10.05□□□□□ -0.8
SRRM1-213ENST00000485441 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
SRRM1-213ENST00000485441 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
SRRM1-213ENST00000485441 TK2O00142 265 aa10.03□□□□□ -0.8
SRRM1-213ENST00000485441 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
SRRM1-213ENST00000485441 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
SRRM1-213ENST00000485441 HOMEZQ8IX15 550 aa10.02□□□□□ -0.81
SRRM1-213ENST00000485441 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
SRRM1-213ENST00000485441 COG6Q9Y2V7 657 aa10.02□□□□□ -0.81
SRRM1-213ENST00000485441 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 SOCS7O14512 581 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 HRCP23327 699 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 MTMR14Q8NCE2 650 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
SRRM1-213ENST00000485441 APBB1O00213 710 aa10□□□□□ -0.81
SRRM1-213ENST00000485441 FDX1P10109 184 aa10□□□□□ -0.81
SRRM1-213ENST00000485441 HDGFP51858 240 aaKnown RBP10□□□□□ -0.81
SRRM1-213ENST00000485441 HLA-CQ95604 372 aa10□□□□□ -0.81
SRRM1-213ENST00000485441 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
SRRM1-213ENST00000485441 SLF2Q8IX21 1173 aa9.99□□□□□ -0.81
SRRM1-213ENST00000485441 ZFRQ96KR1 1074 aaKnown RBP9.99□□□□□ -0.81
SRRM1-213ENST00000485441 HRO43593 1189 aa9.98□□□□□ -0.81
SRRM1-213ENST00000485441 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
SRRM1-213ENST00000485441 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-213ENST00000485441 NBPF3Q9H094 633 aa9.98□□□□□ -0.81
SRRM1-213ENST00000485441 ZBTB3Q9H5J0 574 aa9.97□□□□□ -0.81
SRRM1-213ENST00000485441 FUT2Q10981 343 aa9.96□□□□□ -0.82
SRRM1-213ENST00000485441 NUTM2BA6NNL0 878 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-213ENST00000485441 NUTM2EB1AL46 878 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-213ENST00000485441 RAD21O60216 631 aa9.95□□□□□ -0.82
SRRM1-213ENST00000485441 AP1G2O75843 785 aa9.95□□□□□ -0.82
SRRM1-213ENST00000485441 NUTM2DQ5VT03 806 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-213ENST00000485441 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
SRRM1-213ENST00000485441 NUTM2AQ8IVF1 878 aaPredicted RBP9.95□□□□□ -0.82
SRRM1-213ENST00000485441 CFHP08603 1231 aa9.94□□□□□ -0.82
SRRM1-213ENST00000485441 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
SRRM1-213ENST00000485441 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.82
SRRM1-213ENST00000485441 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
SRRM1-213ENST00000485441 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
SRRM1-213ENST00000485441 USP17L8P0C7I0 530 aa9.92□□□□□ -0.82
SRRM1-213ENST00000485441 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
SRRM1-213ENST00000485441 MTMR2Q13614 643 aa9.92□□□□□ -0.82
SRRM1-213ENST00000485441 MRPL50Q8N5N7 158 aaKnown RBP9.92□□□□□ -0.82
SRRM1-213ENST00000485441 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
SRRM1-213ENST00000485441 GRIPAP1Q4V328 841 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms