RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
RTCB-204ENST00000485373 LTKP29376 864 aa13.4□□□□□ -0.26
RTCB-204ENST00000485373 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
RTCB-204ENST00000485373 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
RTCB-204ENST00000485373 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
RTCB-204ENST00000485373 BCANQ96GW7 911 aa13.39□□□□□ -0.27
RTCB-204ENST00000485373 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
RTCB-204ENST00000485373 ZFYVE9O95405 1425 aa13.39□□□□□ -0.27
RTCB-204ENST00000485373 MED14O60244 1454 aa13.38□□□□□ -0.27
RTCB-204ENST00000485373 ANKRD30BQ9BXX2 1392 aa13.38□□□□□ -0.27
RTCB-204ENST00000485373 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
RTCB-204ENST00000485373 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
RTCB-204ENST00000485373 NEXMIFQ5QGS0 1516 aa13.35□□□□□ -0.27
RTCB-204ENST00000485373 PPLO60437 1756 aa13.35□□□□□ -0.27
RTCB-204ENST00000485373 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
RTCB-204ENST00000485373 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
RTCB-204ENST00000485373 RPGRIP1LQ68CZ1 1315 aa13.33□□□□□ -0.28
RTCB-204ENST00000485373 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
RTCB-204ENST00000485373 ZNF335Q9H4Z2 1342 aaPredicted RBP13.32□□□□□ -0.28
RTCB-204ENST00000485373 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
RTCB-204ENST00000485373 VGFO15240 615 aaPredicted RBP13.3□□□□□ -0.28
RTCB-204ENST00000485373 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
RTCB-204ENST00000485373 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
RTCB-204ENST00000485373 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
RTCB-204ENST00000485373 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
RTCB-204ENST00000485373 NRXN3Q9Y4C0 1643 aa13.27□□□□□ -0.29
RTCB-204ENST00000485373 LTBP4Q8N2S1 1624 aa13.26□□□□□ -0.29
RTCB-204ENST00000485373 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
RTCB-204ENST00000485373 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
RTCB-204ENST00000485373 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 CPS1P31327 1500 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 MYOM2P54296 1465 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
RTCB-204ENST00000485373 CHD2O14647 1828 aaKnown RBP13.24□□□□□ -0.29
RTCB-204ENST00000485373 KCNA6P17658 529 aa13.23□□□□□ -0.29
RTCB-204ENST00000485373 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
RTCB-204ENST00000485373 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
RTCB-204ENST00000485373 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
RTCB-204ENST00000485373 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
RTCB-204ENST00000485373 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
RTCB-204ENST00000485373 PIK3R4Q99570 1358 aa13.21□□□□□ -0.29
RTCB-204ENST00000485373 LAMC1P11047 1609 aa13.21□□□□□ -0.3
RTCB-204ENST00000485373 METP08581 1390 aa13.2□□□□□ -0.3
RTCB-204ENST00000485373 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
RTCB-204ENST00000485373 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
RTCB-204ENST00000485373 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
RTCB-204ENST00000485373 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
RTCB-204ENST00000485373 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
RTCB-204ENST00000485373 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
RTCB-204ENST00000485373 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
RTCB-204ENST00000485373 LRRC7Q96NW7 1537 aa13.18□□□□□ -0.3
RTCB-204ENST00000485373 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
RTCB-204ENST00000485373 PTPRUQ92729 1446 aa13.18□□□□□ -0.3
RTCB-204ENST00000485373 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
RTCB-204ENST00000485373 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
RTCB-204ENST00000485373 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
RTCB-204ENST00000485373 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
RTCB-204ENST00000485373 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
RTCB-204ENST00000485373 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
RTCB-204ENST00000485373 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
RTCB-204ENST00000485373 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
RTCB-204ENST00000485373 ASXL1Q8IXJ9 1541 aa13.15□□□□□ -0.3
RTCB-204ENST00000485373 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
RTCB-204ENST00000485373 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
RTCB-204ENST00000485373 STK26Q9P289 416 aa13.15□□□□□ -0.3
RTCB-204ENST00000485373 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
RTCB-204ENST00000485373 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
RTCB-204ENST00000485373 KNDC1Q76NI1 1749 aa13.13□□□□□ -0.31
RTCB-204ENST00000485373 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
RTCB-204ENST00000485373 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
RTCB-204ENST00000485373 KIAA1210Q9ULL0 1709 aa13.12□□□□□ -0.31
RTCB-204ENST00000485373 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
RTCB-204ENST00000485373 MSH6P52701 1360 aa13.11□□□□□ -0.31
RTCB-204ENST00000485373 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
RTCB-204ENST00000485373 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
RTCB-204ENST00000485373 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
RTCB-204ENST00000485373 TECPR2O15040 1411 aa13.09□□□□□ -0.31
RTCB-204ENST00000485373 TOM1O60784 492 aa13.09□□□□□ -0.31
RTCB-204ENST00000485373 FBXO41Q8TF61 875 aa13.09□□□□□ -0.31
RTCB-204ENST00000485373 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
RTCB-204ENST00000485373 ABCC11Q96J66 1382 aa13.08□□□□□ -0.31
RTCB-204ENST00000485373 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.32
RTCB-204ENST00000485373 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
RTCB-204ENST00000485373 TRPM1Q7Z4N2 1603 aa13.08□□□□□ -0.32
RTCB-204ENST00000485373 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.08□□□□□ -0.32
RTCB-204ENST00000485373 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RTCB-204ENST00000485373 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 ATF3P18847 181 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 POGKQ9P215 609 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
RTCB-204ENST00000485373 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
RTCB-204ENST00000485373 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
RTCB-204ENST00000485373 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
RTCB-204ENST00000485373 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms