RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ZFYVE9O95405 1425 aa24.08■■□□□ 1.44
SIK3-211ENST00000485363 RIMS2Q9UQ26 1411 aa24.07■■□□□ 1.44
SIK3-211ENST00000485363 ALKQ9UM73 1620 aa24.06■■□□□ 1.44
SIK3-211ENST00000485363 PPP1R15AO75807 674 aaPredicted RBP24.06■■□□□ 1.44
SIK3-211ENST00000485363 KCNA6P17658 529 aa24.05■■□□□ 1.44
SIK3-211ENST00000485363 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
SIK3-211ENST00000485363 NAIPQ13075 1403 aa24.04■■□□□ 1.44
SIK3-211ENST00000485363 XIRP1Q702N8 1843 aaKnown RBP24.04■■□□□ 1.44
SIK3-211ENST00000485363 HSPA1LP34931 641 aa24.03■■□□□ 1.44
SIK3-211ENST00000485363 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
SIK3-211ENST00000485363 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
SIK3-211ENST00000485363 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
SIK3-211ENST00000485363 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
SIK3-211ENST00000485363 TMEM94Q12767 1356 aa23.98■■□□□ 1.43
SIK3-211ENST00000485363 HFM1A2PYH4 1435 aa23.98■■□□□ 1.43
SIK3-211ENST00000485363 NKTRP30414 1462 aaKnown RBP23.97■■□□□ 1.43
SIK3-211ENST00000485363 PROSER2Q86WR7 435 aaPredicted RBP23.97■■□□□ 1.43
SIK3-211ENST00000485363 NUTM2DQ5VT03 806 aaPredicted RBP23.95■■□□□ 1.42
SIK3-211ENST00000485363 CHD2O14647 1828 aaKnown RBP23.95■■□□□ 1.42
SIK3-211ENST00000485363 TBX22Q9Y458 520 aa23.94■■□□□ 1.42
SIK3-211ENST00000485363 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
SIK3-211ENST00000485363 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
SIK3-211ENST00000485363 RBM33Q96EV2 1170 aaKnown RBP23.9■■□□□ 1.42
SIK3-211ENST00000485363 ADAMTS13Q76LX8 1427 aa23.9■■□□□ 1.42
SIK3-211ENST00000485363 TRPM2O94759 1503 aa23.89■■□□□ 1.42
SIK3-211ENST00000485363 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.41
SIK3-211ENST00000485363 ILDR2Q71H61 639 aa23.88■■□□□ 1.41
SIK3-211ENST00000485363 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
SIK3-211ENST00000485363 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
SIK3-211ENST00000485363 MSH6P52701 1360 aa23.86■■□□□ 1.41
SIK3-211ENST00000485363 KIF1BO60333 1816 aa23.86■■□□□ 1.41
SIK3-211ENST00000485363 SLC4A1APQ9BWU0 796 aaKnown RBP23.85■■□□□ 1.41
SIK3-211ENST00000485363 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
SIK3-211ENST00000485363 MED1Q15648 1581 aaPredicted RBP23.84■■□□□ 1.41
SIK3-211ENST00000485363 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
SIK3-211ENST00000485363 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
SIK3-211ENST00000485363 NRXN3Q9Y4C0 1643 aa23.8■■□□□ 1.4
SIK3-211ENST00000485363 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
SIK3-211ENST00000485363 ROBO1Q9Y6N7 1651 aa23.79■■□□□ 1.4
SIK3-211ENST00000485363 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SIK3-211ENST00000485363 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.4
SIK3-211ENST00000485363 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
SIK3-211ENST00000485363 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
SIK3-211ENST00000485363 SOCS7O14512 581 aa23.72■■□□□ 1.39
SIK3-211ENST00000485363 C19orf44Q9H6X5 657 aa23.72■■□□□ 1.39
SIK3-211ENST00000485363 XRN1Q8IZH2 1706 aaKnown RBP23.72■■□□□ 1.39
SIK3-211ENST00000485363 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.71■■□□□ 1.39
SIK3-211ENST00000485363 METP08581 1390 aa23.71■■□□□ 1.39
SIK3-211ENST00000485363 PHF23Q9BUL5 403 aaPredicted RBP23.71■■□□□ 1.39
SIK3-211ENST00000485363 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
SIK3-211ENST00000485363 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
SIK3-211ENST00000485363 FOXD1Q16676 465 aa23.7■■□□□ 1.38
SIK3-211ENST00000485363 CADPS2Q86UW7 1296 aa23.7■■□□□ 1.38
SIK3-211ENST00000485363 ACIN1Q9UKV3 1341 aaKnown RBP23.69■■□□□ 1.38
SIK3-211ENST00000485363 ATF3P18847 181 aa23.69■■□□□ 1.38
SIK3-211ENST00000485363 MPHOSPH9Q99550 1183 aa23.69■■□□□ 1.38
SIK3-211ENST00000485363 PPLO60437 1756 aa23.66■■□□□ 1.38
SIK3-211ENST00000485363 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
SIK3-211ENST00000485363 CCDC144AA2RUR9 1427 aa23.66■■□□□ 1.38
SIK3-211ENST00000485363 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
SIK3-211ENST00000485363 DCCP43146 1447 aa23.63■■□□□ 1.37
SIK3-211ENST00000485363 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
SIK3-211ENST00000485363 COL16A1Q07092 1604 aaPredicted RBP23.57■■□□□ 1.36
SIK3-211ENST00000485363 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
SIK3-211ENST00000485363 JCADQ9P266 1359 aa23.56■■□□□ 1.36
SIK3-211ENST00000485363 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
SIK3-211ENST00000485363 PTCH1Q13635 1447 aa23.56■■□□□ 1.36
SIK3-211ENST00000485363 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
SIK3-211ENST00000485363 AHDC1Q5TGY3 1603 aaPredicted RBP23.55■■□□□ 1.36
SIK3-211ENST00000485363 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
SIK3-211ENST00000485363 NALCNQ8IZF0 1738 aa23.54■■□□□ 1.36
SIK3-211ENST00000485363 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
SIK3-211ENST00000485363 ANKRD30BQ9BXX2 1392 aa23.53■■□□□ 1.36
SIK3-211ENST00000485363 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
SIK3-211ENST00000485363 MST1RQ04912 1400 aa23.53■■□□□ 1.36
SIK3-211ENST00000485363 PRAG1Q86YV5 1406 aa23.52■■□□□ 1.36
SIK3-211ENST00000485363 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
SIK3-211ENST00000485363 ROBO2Q9HCK4 1378 aa23.51■■□□□ 1.35
SIK3-211ENST00000485363 ASXL1Q8IXJ9 1541 aa23.5■■□□□ 1.35
SIK3-211ENST00000485363 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
SIK3-211ENST00000485363 SHPRHQ149N8 1683 aa23.46■■□□□ 1.35
SIK3-211ENST00000485363 SPATA31A6Q5VVP1 1343 aa23.46■■□□□ 1.35
SIK3-211ENST00000485363 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
SIK3-211ENST00000485363 PIK3C2GO75747 1445 aa23.44■■□□□ 1.34
SIK3-211ENST00000485363 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
SIK3-211ENST00000485363 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
SIK3-211ENST00000485363 HRCP23327 699 aa23.4■■□□□ 1.34
SIK3-211ENST00000485363 STK26Q9P289 416 aa23.4■■□□□ 1.34
SIK3-211ENST00000485363 TECPR2O15040 1411 aa23.4■■□□□ 1.34
SIK3-211ENST00000485363 LRP6O75581 1613 aa23.39■■□□□ 1.33
SIK3-211ENST00000485363 KNDC1Q76NI1 1749 aa23.39■■□□□ 1.33
SIK3-211ENST00000485363 MYOM2P54296 1465 aa23.38■■□□□ 1.33
SIK3-211ENST00000485363 MEX3CQ5U5Q3 659 aaKnown RBP23.38■■□□□ 1.33
SIK3-211ENST00000485363 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
SIK3-211ENST00000485363 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
SIK3-211ENST00000485363 LRRC59Q96AG4 307 aaKnown RBP23.38■■□□□ 1.33
SIK3-211ENST00000485363 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
SIK3-211ENST00000485363 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
SIK3-211ENST00000485363 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
SIK3-211ENST00000485363 DDX17Q92841 729 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms