RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 NLRP1Q9C000 1473 aa20.8■□□□□ 0.92
LRIF1-202ENST00000485275 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
LRIF1-202ENST00000485275 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
LRIF1-202ENST00000485275 ZFYVE9O95405 1425 aa20.75■□□□□ 0.91
LRIF1-202ENST00000485275 ZNF142P52746 1687 aaPredicted RBP20.75■□□□□ 0.91
LRIF1-202ENST00000485275 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
LRIF1-202ENST00000485275 NUTM2DQ5VT03 806 aaPredicted RBP20.74■□□□□ 0.91
LRIF1-202ENST00000485275 RPGRIP1LQ68CZ1 1315 aa20.74■□□□□ 0.91
LRIF1-202ENST00000485275 KIAA1210Q9ULL0 1709 aa20.73■□□□□ 0.91
LRIF1-202ENST00000485275 KDM4FA0A1W2PPD8 638 aa20.72■□□□□ 0.91
LRIF1-202ENST00000485275 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
LRIF1-202ENST00000485275 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
LRIF1-202ENST00000485275 GPRASP1Q5JY77 1395 aa20.71■□□□□ 0.91
LRIF1-202ENST00000485275 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
LRIF1-202ENST00000485275 LAMC1P11047 1609 aa20.71■□□□□ 0.91
LRIF1-202ENST00000485275 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
LRIF1-202ENST00000485275 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
LRIF1-202ENST00000485275 TMEM2Q9UHN6 1383 aa20.68■□□□□ 0.9
LRIF1-202ENST00000485275 NRXN3Q9Y4C0 1643 aa20.68■□□□□ 0.9
LRIF1-202ENST00000485275 SLIT1O75093 1534 aa20.68■□□□□ 0.9
LRIF1-202ENST00000485275 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
LRIF1-202ENST00000485275 ARHGAP23Q9P227 1491 aa20.67■□□□□ 0.9
LRIF1-202ENST00000485275 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
LRIF1-202ENST00000485275 IQGAP1P46940 1657 aa20.66■□□□□ 0.9
LRIF1-202ENST00000485275 ADGRB1O14514 1584 aa20.66■□□□□ 0.9
LRIF1-202ENST00000485275 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
LRIF1-202ENST00000485275 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
LRIF1-202ENST00000485275 SETD1AO15047 1707 aaKnown RBP20.66■□□□□ 0.9
LRIF1-202ENST00000485275 USP47Q96K76 1375 aa20.64■□□□□ 0.89
LRIF1-202ENST00000485275 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
LRIF1-202ENST00000485275 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
LRIF1-202ENST00000485275 SENP3Q9H4L4 574 aaPredicted RBP20.64■□□□□ 0.89
LRIF1-202ENST00000485275 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
LRIF1-202ENST00000485275 HSPA5P11021 654 aaKnown RBP20.63■□□□□ 0.89
LRIF1-202ENST00000485275 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
LRIF1-202ENST00000485275 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
LRIF1-202ENST00000485275 C14orf93Q9H972 538 aaKnown RBP20.61■□□□□ 0.89
LRIF1-202ENST00000485275 LTKP29376 864 aa20.6■□□□□ 0.89
LRIF1-202ENST00000485275 EIF4G2P78344 907 aaKnown RBP eCLIP20.59■□□□□ 0.89
LRIF1-202ENST00000485275 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
LRIF1-202ENST00000485275 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
LRIF1-202ENST00000485275 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.55■□□□□ 0.88
LRIF1-202ENST00000485275 TMEM132EQ6IEE7 984 aa20.54■□□□□ 0.88
LRIF1-202ENST00000485275 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
LRIF1-202ENST00000485275 PLEKHG1Q9ULL1 1385 aa20.53■□□□□ 0.88
LRIF1-202ENST00000485275 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
LRIF1-202ENST00000485275 TXNDC2Q86VQ3 553 aa20.52■□□□□ 0.88
LRIF1-202ENST00000485275 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
LRIF1-202ENST00000485275 POLR1AO95602 1720 aaPredicted RBP20.51■□□□□ 0.87
LRIF1-202ENST00000485275 MED14O60244 1454 aa20.51■□□□□ 0.87
LRIF1-202ENST00000485275 C11orf95C9JLR9 678 aaPredicted RBP20.5■□□□□ 0.87
LRIF1-202ENST00000485275 LMTK3Q96Q04 1460 aa20.5■□□□□ 0.87
LRIF1-202ENST00000485275 METP08581 1390 aa20.49■□□□□ 0.87
LRIF1-202ENST00000485275 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
LRIF1-202ENST00000485275 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
LRIF1-202ENST00000485275 TESK2Q96S53 571 aa20.46■□□□□ 0.87
LRIF1-202ENST00000485275 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
LRIF1-202ENST00000485275 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
LRIF1-202ENST00000485275 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.87
LRIF1-202ENST00000485275 DIP2AQ14689 1571 aa20.45■□□□□ 0.86
LRIF1-202ENST00000485275 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
LRIF1-202ENST00000485275 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
LRIF1-202ENST00000485275 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
LRIF1-202ENST00000485275 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
LRIF1-202ENST00000485275 CCDC7Q96M83 1385 aa20.42■□□□□ 0.86
LRIF1-202ENST00000485275 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
LRIF1-202ENST00000485275 PTPRUQ92729 1446 aa20.41■□□□□ 0.86
LRIF1-202ENST00000485275 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
LRIF1-202ENST00000485275 LRPPRCP42704 1394 aaKnown RBP20.41■□□□□ 0.86
LRIF1-202ENST00000485275 ANKLE2Q86XL3 938 aa20.41■□□□□ 0.86
LRIF1-202ENST00000485275 STK26Q9P289 416 aa20.41■□□□□ 0.86
LRIF1-202ENST00000485275 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
LRIF1-202ENST00000485275 HSPA2P54652 639 aa20.4■□□□□ 0.86
LRIF1-202ENST00000485275 BCANQ96GW7 911 aa20.4■□□□□ 0.86
LRIF1-202ENST00000485275 CPS1P31327 1500 aa20.39■□□□□ 0.86
LRIF1-202ENST00000485275 TECPR2O15040 1411 aa20.39■□□□□ 0.85
LRIF1-202ENST00000485275 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
LRIF1-202ENST00000485275 NCKAP5LQ9HCH0 1330 aa20.38■□□□□ 0.85
LRIF1-202ENST00000485275 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
LRIF1-202ENST00000485275 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
LRIF1-202ENST00000485275 CENPJQ9HC77 1338 aaPredicted RBP20.37■□□□□ 0.85
LRIF1-202ENST00000485275 ABCC11Q96J66 1382 aa20.36■□□□□ 0.85
LRIF1-202ENST00000485275 SBNO2Q9Y2G9 1366 aa20.36■□□□□ 0.85
LRIF1-202ENST00000485275 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
LRIF1-202ENST00000485275 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
LRIF1-202ENST00000485275 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
LRIF1-202ENST00000485275 CHD2O14647 1828 aaKnown RBP20.33■□□□□ 0.85
LRIF1-202ENST00000485275 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
LRIF1-202ENST00000485275 PRAM1Q96QH2 718 aa20.33■□□□□ 0.84
LRIF1-202ENST00000485275 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
LRIF1-202ENST00000485275 MYOM1P52179 1685 aa20.32■□□□□ 0.84
LRIF1-202ENST00000485275 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
LRIF1-202ENST00000485275 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
LRIF1-202ENST00000485275 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
LRIF1-202ENST00000485275 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
LRIF1-202ENST00000485275 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
LRIF1-202ENST00000485275 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
LRIF1-202ENST00000485275 TMF1P82094 1093 aa20.29■□□□□ 0.84
LRIF1-202ENST00000485275 PTCH1Q13635 1447 aa20.28■□□□□ 0.84
LRIF1-202ENST00000485275 NWD1Q149M9 1564 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms