RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, human

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP1-213	ENST00000485112	ZNF326	Q5BKZ1	582 aa	Known RBP	33.5	■■■□□ 2.95
CLASP1-213	ENST00000485112	PPP1R15A	O75807	674 aa	Predicted RBP	33.49	■■■□□ 2.95
CLASP1-213	ENST00000485112	IQGAP1	P46940	1657 aa		33.45	■■■□□ 2.95
CLASP1-213	ENST00000485112	MYO5B	Q9ULV0	1848 aa		33.45	■■■□□ 2.95
CLASP1-213	ENST00000485112	ANKRD30B	Q9BXX2	1392 aa		33.44	■■■□□ 2.94
CLASP1-213	ENST00000485112	KIF1B	O60333	1816 aa		33.44	■■■□□ 2.94
CLASP1-213	ENST00000485112	RPGRIP1L	Q68CZ1	1315 aa		33.42	■■■□□ 2.94
CLASP1-213	ENST00000485112	PLEKHG1	Q9ULL1	1385 aa		33.42	■■■□□ 2.94
CLASP1-213	ENST00000485112	BCAN	Q96GW7	911 aa		33.4	■■■□□ 2.94
CLASP1-213	ENST00000485112	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.36	■■■□□ 2.93
CLASP1-213	ENST00000485112	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.35	■■■□□ 2.93
CLASP1-213	ENST00000485112	SPATA31E1	Q6ZUB1	1445 aa		33.35	■■■□□ 2.93
CLASP1-213	ENST00000485112	VGF	O15240	615 aa	Predicted RBP	33.33	■■■□□ 2.93
CLASP1-213	ENST00000485112	NEXMIF	Q5QGS0	1516 aa		33.32	■■■□□ 2.92
CLASP1-213	ENST00000485112	RGL3	Q3MIN7	710 aa		33.31	■■■□□ 2.92
CLASP1-213	ENST00000485112	SLC26A8	Q96RN1	970 aa		33.3	■■■□□ 2.92
CLASP1-213	ENST00000485112	PCGF6	Q9BYE7	350 aa		33.28	■■■□□ 2.92
CLASP1-213	ENST00000485112	TBX22	Q9Y458	520 aa		33.28	■■■□□ 2.92
CLASP1-213	ENST00000485112	LTBP4	Q8N2S1	1624 aa		33.28	■■■□□ 2.92
CLASP1-213	ENST00000485112	CERK	Q8TCT0	537 aa		33.27	■■■□□ 2.92
CLASP1-213	ENST00000485112	CPS1	P31327	1500 aa		33.23	■■■□□ 2.91
CLASP1-213	ENST00000485112	DHX57	Q6P158	1386 aa	Known RBP	33.23	■■■□□ 2.91
CLASP1-213	ENST00000485112	SENP3	Q9H4L4	574 aa	Predicted RBP	33.23	■■■□□ 2.91
CLASP1-213	ENST00000485112	ADAMTS13	Q76LX8	1427 aa		33.22	■■■□□ 2.91
CLASP1-213	ENST00000485112	DIP2A	Q14689	1571 aa		33.21	■■■□□ 2.91
CLASP1-213	ENST00000485112	SETBP1	Q9Y6X0	1596 aa		33.21	■■■□□ 2.91
CLASP1-213	ENST00000485112	KCNA6	P17658	529 aa		33.19	■■■□□ 2.9
CLASP1-213	ENST00000485112	PIK3R4	Q99570	1358 aa		33.18	■■■□□ 2.9
CLASP1-213	ENST00000485112	PPL	O60437	1756 aa		33.16	■■■□□ 2.9
CLASP1-213	ENST00000485112	IQSEC2	Q5JU85	1478 aa		33.15	■■■□□ 2.9
CLASP1-213	ENST00000485112	STAC3	Q96MF2	364 aa		33.13	■■■□□ 2.89
CLASP1-213	ENST00000485112	ADGRF5	Q8IZF2	1346 aa		33.11	■■■□□ 2.89
CLASP1-213	ENST00000485112	NRXN3	Q9Y4C0	1643 aa		33.1	■■■□□ 2.89
CLASP1-213	ENST00000485112	MYOM2	P54296	1465 aa		33.09	■■■□□ 2.89
CLASP1-213	ENST00000485112	IFT172	Q9UG01	1749 aa		33.08	■■■□□ 2.89
CLASP1-213	ENST00000485112	NWD1	Q149M9	1564 aa		33.07	■■■□□ 2.88
CLASP1-213	ENST00000485112	NKTR	P30414	1462 aa	Known RBP	33.05	■■■□□ 2.88
CLASP1-213	ENST00000485112	DCAF11	Q8TEB1	546 aa		33.05	■■■□□ 2.88
CLASP1-213	ENST00000485112	STRCP1	A6NGW2	1772 aa		33.04	■■■□□ 2.88
CLASP1-213	ENST00000485112	LRRC7	Q96NW7	1537 aa		33.04	■■■□□ 2.88
CLASP1-213	ENST00000485112	MET	P08581	1390 aa		33.04	■■■□□ 2.88
CLASP1-213	ENST00000485112	PIK3C2G	O75747	1445 aa		33.03	■■■□□ 2.88
CLASP1-213	ENST00000485112	ALK	Q9UM73	1620 aa		33.02	■■■□□ 2.88
CLASP1-213	ENST00000485112	AMOTL2	Q9Y2J4	779 aa		33.02	■■■□□ 2.88
CLASP1-213	ENST00000485112	NRXN1	Q9ULB1	1477 aa		33.01	■■■□□ 2.88
CLASP1-213	ENST00000485112	PROSER2	Q86WR7	435 aa	Predicted RBP	33.01	■■■□□ 2.87
CLASP1-213	ENST00000485112	SIN3A	Q96ST3	1273 aa		33.01	■■■□□ 2.87
CLASP1-213	ENST00000485112	CHD2	O14647	1828 aa	Known RBP	33	■■■□□ 2.87
CLASP1-213	ENST00000485112	FBXO41	Q8TF61	875 aa		32.99	■■■□□ 2.87
CLASP1-213	ENST00000485112	KDM2A	Q9Y2K7	1162 aa		32.99	■■■□□ 2.87
CLASP1-213	ENST00000485112	NEUROD1	Q13562	356 aa		32.98	■■■□□ 2.87
CLASP1-213	ENST00000485112	PTPRU	Q92729	1446 aa		32.98	■■■□□ 2.87
CLASP1-213	ENST00000485112	C14orf93	Q9H972	538 aa	Known RBP	32.96	■■■□□ 2.87
CLASP1-213	ENST00000485112	TMEM94	Q12767	1356 aa		32.96	■■■□□ 2.87
CLASP1-213	ENST00000485112	NCOA3	Q9Y6Q9	1424 aa		32.92	■■■□□ 2.86
CLASP1-213	ENST00000485112	SETD1A	O15047	1707 aa	Known RBP	32.91	■■■□□ 2.86
CLASP1-213	ENST00000485112	CFAP70	Q5T0N1	1121 aa		32.89	■■■□□ 2.86
CLASP1-213	ENST00000485112	XRN1	Q8IZH2	1706 aa	Known RBP	32.88	■■■□□ 2.85
CLASP1-213	ENST00000485112	UBAP1L	F5GYI3	381 aa		32.88	■■■□□ 2.85
CLASP1-213	ENST00000485112	TOM1	O60784	492 aa		32.88	■■■□□ 2.85
CLASP1-213	ENST00000485112	L3MBTL2	Q969R5	705 aa		32.88	■■■□□ 2.85
CLASP1-213	ENST00000485112	LAMC1	P11047	1609 aa		32.88	■■■□□ 2.85
CLASP1-213	ENST00000485112	PRAG1	Q86YV5	1406 aa		32.86	■■■□□ 2.85
CLASP1-213	ENST00000485112	CLSPN	Q9HAW4	1339 aa		32.86	■■■□□ 2.85
CLASP1-213	ENST00000485112	RBM33	Q96EV2	1170 aa	Known RBP	32.85	■■■□□ 2.85
CLASP1-213	ENST00000485112	LRPPRC	P42704	1394 aa	Known RBP	32.84	■■■□□ 2.85
CLASP1-213	ENST00000485112	PTCH1	Q13635	1447 aa		32.84	■■■□□ 2.85
CLASP1-213	ENST00000485112	TMEM132E	Q6IEE7	984 aa		32.83	■■■□□ 2.85
CLASP1-213	ENST00000485112	C14orf37	Q86TY3	774 aa		32.83	■■■□□ 2.85
CLASP1-213	ENST00000485112	MSH6	P52701	1360 aa		32.83	■■■□□ 2.85
CLASP1-213	ENST00000485112	TONSL	Q96HA7	1378 aa		32.81	■■■□□ 2.84
CLASP1-213	ENST00000485112	ABCC11	Q96J66	1382 aa		32.81	■■■□□ 2.84
CLASP1-213	ENST00000485112	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.79	■■■□□ 2.84
CLASP1-213	ENST00000485112	ASXL1	Q8IXJ9	1541 aa		32.79	■■■□□ 2.84
CLASP1-213	ENST00000485112	ILDR1	Q86SU0	546 aa	Predicted RBP	32.79	■■■□□ 2.84
CLASP1-213	ENST00000485112	STK26	Q9P289	416 aa		32.79	■■■□□ 2.84
CLASP1-213	ENST00000485112	TECPR2	O15040	1411 aa		32.78	■■■□□ 2.84
CLASP1-213	ENST00000485112	XIRP1	Q702N8	1843 aa	Known RBP	32.78	■■■□□ 2.84
CLASP1-213	ENST00000485112	C19orf44	Q9H6X5	657 aa		32.77	■■■□□ 2.84
CLASP1-213	ENST00000485112	ROBO2	Q9HCK4	1378 aa		32.77	■■■□□ 2.84
CLASP1-213	ENST00000485112	SIRT1	Q96EB6	747 aa		32.75	■■■□□ 2.83
CLASP1-213	ENST00000485112	CCER1	Q8TC90	406 aa	Predicted RBP	32.74	■■■□□ 2.83
CLASP1-213	ENST00000485112	ADGRB1	O14514	1584 aa		32.71	■■■□□ 2.83
CLASP1-213	ENST00000485112	CADPS2	Q86UW7	1296 aa		32.71	■■■□□ 2.83
CLASP1-213	ENST00000485112	ATF3	P18847	181 aa		32.7	■■■□□ 2.83
CLASP1-213	ENST00000485112	DCC	P43146	1447 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	FAM135B	Q49AJ0	1406 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	ADGRL3	Q9HAR2	1447 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	KNDC1	Q76NI1	1749 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	PIP4K2B	P78356	416 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	KIAA1210	Q9ULL0	1709 aa		32.68	■■■□□ 2.82
CLASP1-213	ENST00000485112	SCAF1	Q9H7N4	1312 aa	Known RBP	32.67	■■■□□ 2.82
CLASP1-213	ENST00000485112	TIMELESS	Q9UNS1	1208 aa		32.65	■■■□□ 2.82
CLASP1-213	ENST00000485112	WAPL	Q7Z5K2	1190 aa		32.64	■■■□□ 2.82
CLASP1-213	ENST00000485112	DLC1	Q96QB1	1528 aa		32.64	■■■□□ 2.82
CLASP1-213	ENST00000485112	TRAK1	Q9UPV9	953 aa		32.63	■■■□□ 2.81
CLASP1-213	ENST00000485112	SLAIN2	Q9P270	581 aa		32.62	■■■□□ 2.81
CLASP1-213	ENST00000485112	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.61	■■■□□ 2.81
CLASP1-213	ENST00000485112	NBPF1	Q3BBV0	1214 aa		32.6	■■■□□ 2.81
CLASP1-213	ENST00000485112	POGK	Q9P215	609 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 63 ms