RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FOXD1Q16676 465 aa26.31■■□□□ 1.8
SREBF1-213ENST00000485080 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
SREBF1-213ENST00000485080 PLEKHG1Q9ULL1 1385 aa26.27■■□□□ 1.8
SREBF1-213ENST00000485080 KIF1BO60333 1816 aa26.27■■□□□ 1.8
SREBF1-213ENST00000485080 CCDC144AA2RUR9 1427 aa26.26■■□□□ 1.79
SREBF1-213ENST00000485080 ZNF335Q9H4Z2 1342 aaPredicted RBP26.26■■□□□ 1.79
SREBF1-213ENST00000485080 CERKQ8TCT0 537 aa26.24■■□□□ 1.79
SREBF1-213ENST00000485080 ANKRD30BQ9BXX2 1392 aa26.21■■□□□ 1.79
SREBF1-213ENST00000485080 RPGRIP1LQ68CZ1 1315 aa26.21■■□□□ 1.79
SREBF1-213ENST00000485080 PPP1R15AO75807 674 aaPredicted RBP26.2■■□□□ 1.78
SREBF1-213ENST00000485080 SPATA31E1Q6ZUB1 1445 aa26.2■■□□□ 1.78
SREBF1-213ENST00000485080 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
SREBF1-213ENST00000485080 ZNF326Q5BKZ1 582 aaKnown RBP26.19■■□□□ 1.78
SREBF1-213ENST00000485080 CPS1P31327 1500 aa26.19■■□□□ 1.78
SREBF1-213ENST00000485080 NEXMIFQ5QGS0 1516 aa26.19■■□□□ 1.78
SREBF1-213ENST00000485080 TBX22Q9Y458 520 aa26.16■■□□□ 1.78
SREBF1-213ENST00000485080 SLC26A8Q96RN1 970 aa26.14■■□□□ 1.78
SREBF1-213ENST00000485080 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
SREBF1-213ENST00000485080 DIP2AQ14689 1571 aa26.13■■□□□ 1.77
SREBF1-213ENST00000485080 NUTM2DQ5VT03 806 aaPredicted RBP26.13■■□□□ 1.77
SREBF1-213ENST00000485080 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
SREBF1-213ENST00000485080 VGFO15240 615 aaPredicted RBP26.12■■□□□ 1.77
SREBF1-213ENST00000485080 PIK3R4Q99570 1358 aa26.1■■□□□ 1.77
SREBF1-213ENST00000485080 KCNA6P17658 529 aa26.1■■□□□ 1.77
SREBF1-213ENST00000485080 BCANQ96GW7 911 aa26.1■■□□□ 1.77
SREBF1-213ENST00000485080 STRCP1A6NGW2 1772 aa26.1■■□□□ 1.77
SREBF1-213ENST00000485080 FBXO41Q8TF61 875 aa26.08■■□□□ 1.77
SREBF1-213ENST00000485080 PPLO60437 1756 aa26.07■■□□□ 1.76
SREBF1-213ENST00000485080 NRXN3Q9Y4C0 1643 aa26.07■■□□□ 1.76
SREBF1-213ENST00000485080 NWD1Q149M9 1564 aa26.06■■□□□ 1.76
SREBF1-213ENST00000485080 LRRC7Q96NW7 1537 aa26.04■■□□□ 1.76
SREBF1-213ENST00000485080 RGL3Q3MIN7 710 aa26.04■■□□□ 1.76
SREBF1-213ENST00000485080 CHD2O14647 1828 aaKnown RBP26.03■■□□□ 1.76
SREBF1-213ENST00000485080 NKTRP30414 1462 aaKnown RBP26.03■■□□□ 1.76
SREBF1-213ENST00000485080 IFT172Q9UG01 1749 aa26.02■■□□□ 1.76
SREBF1-213ENST00000485080 STAC3Q96MF2 364 aa25.98■■□□□ 1.75
SREBF1-213ENST00000485080 ADGRF5Q8IZF2 1346 aa25.97■■□□□ 1.75
SREBF1-213ENST00000485080 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
SREBF1-213ENST00000485080 MYOM2P54296 1465 aa25.97■■□□□ 1.75
SREBF1-213ENST00000485080 DHX57Q6P158 1386 aaKnown RBP25.96■■□□□ 1.75
SREBF1-213ENST00000485080 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
SREBF1-213ENST00000485080 ILDR1Q86SU0 546 aaPredicted RBP25.95■■□□□ 1.74
SREBF1-213ENST00000485080 METP08581 1390 aa25.95■■□□□ 1.74
SREBF1-213ENST00000485080 ALKQ9UM73 1620 aa25.94■■□□□ 1.74
SREBF1-213ENST00000485080 PIK3C2GO75747 1445 aa25.94■■□□□ 1.74
SREBF1-213ENST00000485080 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
SREBF1-213ENST00000485080 SETD1AO15047 1707 aaKnown RBP25.94■■□□□ 1.74
SREBF1-213ENST00000485080 NCOA3Q9Y6Q9 1424 aa25.93■■□□□ 1.74
SREBF1-213ENST00000485080 PROSER2Q86WR7 435 aaPredicted RBP25.92■■□□□ 1.74
SREBF1-213ENST00000485080 AMOTL2Q9Y2J4 779 aa25.92■■□□□ 1.74
SREBF1-213ENST00000485080 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
SREBF1-213ENST00000485080 PRAG1Q86YV5 1406 aa25.91■■□□□ 1.74
SREBF1-213ENST00000485080 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
SREBF1-213ENST00000485080 XIRP1Q702N8 1843 aaKnown RBP25.91■■□□□ 1.74
SREBF1-213ENST00000485080 UBAP1LF5GYI3 381 aa25.87■■□□□ 1.73
SREBF1-213ENST00000485080 TOM1O60784 492 aa25.86■■□□□ 1.73
SREBF1-213ENST00000485080 C14orf93Q9H972 538 aaKnown RBP25.86■■□□□ 1.73
SREBF1-213ENST00000485080 DCAF11Q8TEB1 546 aa25.84■■□□□ 1.73
SREBF1-213ENST00000485080 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
SREBF1-213ENST00000485080 PTCH1Q13635 1447 aa25.82■■□□□ 1.72
SREBF1-213ENST00000485080 LAMC1P11047 1609 aa25.81■■□□□ 1.72
SREBF1-213ENST00000485080 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
SREBF1-213ENST00000485080 MSH6P52701 1360 aa25.79■■□□□ 1.72
SREBF1-213ENST00000485080 TECPR2O15040 1411 aa25.79■■□□□ 1.72
SREBF1-213ENST00000485080 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
SREBF1-213ENST00000485080 ABCC11Q96J66 1382 aa25.78■■□□□ 1.72
SREBF1-213ENST00000485080 ASXL1Q8IXJ9 1541 aa25.78■■□□□ 1.72
SREBF1-213ENST00000485080 RBM33Q96EV2 1170 aaKnown RBP25.77■■□□□ 1.72
SREBF1-213ENST00000485080 C19orf44Q9H6X5 657 aa25.77■■□□□ 1.72
SREBF1-213ENST00000485080 KDM2AQ9Y2K7 1162 aa25.77■■□□□ 1.72
SREBF1-213ENST00000485080 CFAP70Q5T0N1 1121 aa25.76■■□□□ 1.71
SREBF1-213ENST00000485080 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
SREBF1-213ENST00000485080 SIRT1Q96EB6 747 aa25.74■■□□□ 1.71
SREBF1-213ENST00000485080 DCCP43146 1447 aa25.73■■□□□ 1.71
SREBF1-213ENST00000485080 YTHDC2Q9H6S0 1430 aaKnown RBP25.73■■□□□ 1.71
SREBF1-213ENST00000485080 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
SREBF1-213ENST00000485080 L3MBTL2Q969R5 705 aa25.72■■□□□ 1.71
SREBF1-213ENST00000485080 KNDC1Q76NI1 1749 aa25.71■■□□□ 1.71
SREBF1-213ENST00000485080 ADGRB1O14514 1584 aa25.71■■□□□ 1.71
SREBF1-213ENST00000485080 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
SREBF1-213ENST00000485080 ADGRL3Q9HAR2 1447 aa25.7■■□□□ 1.7
SREBF1-213ENST00000485080 NEUROD1Q13562 356 aa25.69■■□□□ 1.7
SREBF1-213ENST00000485080 C14orf37Q86TY3 774 aa25.69■■□□□ 1.7
SREBF1-213ENST00000485080 FAM135BQ49AJ0 1406 aa25.69■■□□□ 1.7
SREBF1-213ENST00000485080 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
SREBF1-213ENST00000485080 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
SREBF1-213ENST00000485080 PIP4K2BP78356 416 aa25.67■■□□□ 1.7
SREBF1-213ENST00000485080 KIAA1210Q9ULL0 1709 aa25.67■■□□□ 1.7
SREBF1-213ENST00000485080 ATF3P18847 181 aa25.66■■□□□ 1.7
SREBF1-213ENST00000485080 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
SREBF1-213ENST00000485080 STK26Q9P289 416 aa25.66■■□□□ 1.7
SREBF1-213ENST00000485080 DLC1Q96QB1 1528 aa25.64■■□□□ 1.7
SREBF1-213ENST00000485080 NALCNQ8IZF0 1738 aa25.62■■□□□ 1.69
SREBF1-213ENST00000485080 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
SREBF1-213ENST00000485080 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
SREBF1-213ENST00000485080 PLEKHH1Q9ULM0 1364 aa25.57■■□□□ 1.68
SREBF1-213ENST00000485080 MST1RQ04912 1400 aa25.57■■□□□ 1.68
SREBF1-213ENST00000485080 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
SREBF1-213ENST00000485080 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
SREBF1-213ENST00000485080 HSPA1LP34931 641 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms