RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 RIMS2Q9UQ26 1411 aa43.17■■■■■ 4.5
HLA-C-207ENST00000484378 BCANQ96GW7 911 aa43.17■■■■■ 4.5
HLA-C-207ENST00000484378 CHGAP10645 457 aaKnown RBP43.16■■■■■ 4.5
HLA-C-207ENST00000484378 XIRP1Q702N8 1843 aaKnown RBP43.15■■■■■ 4.5
HLA-C-207ENST00000484378 PPP1R15AO75807 674 aaPredicted RBP43.14■■■■■ 4.5
HLA-C-207ENST00000484378 KCNA6P17658 529 aa43.11■■■■■ 4.49
HLA-C-207ENST00000484378 HDGFP51858 240 aaKnown RBP43.11■■■■■ 4.49
HLA-C-207ENST00000484378 PLEKHG1Q9ULL1 1385 aa43.11■■■■■ 4.49
HLA-C-207ENST00000484378 SENP3Q9H4L4 574 aaPredicted RBP43.09■■■■■ 4.49
HLA-C-207ENST00000484378 NWD1Q149M9 1564 aa43.07■■■■■ 4.49
HLA-C-207ENST00000484378 TMEM94Q12767 1356 aa43.05■■■■■ 4.48
HLA-C-207ENST00000484378 ILDR2Q71H61 639 aa43.04■■■■■ 4.48
HLA-C-207ENST00000484378 ABCF1Q8NE71 845 aaKnown RBP eCLIP43.04■■■■■ 4.48
HLA-C-207ENST00000484378 NKTRP30414 1462 aaKnown RBP43.04■■■■■ 4.48
HLA-C-207ENST00000484378 NAIPQ13075 1403 aa43.03■■■■■ 4.48
HLA-C-207ENST00000484378 SPHKAPQ2M3C7 1700 aa43.02■■■■■ 4.48
HLA-C-207ENST00000484378 PROSER2Q86WR7 435 aaPredicted RBP42.99■■■■■ 4.47
HLA-C-207ENST00000484378 NUTM2DQ5VT03 806 aaPredicted RBP42.95■■■■■ 4.47
HLA-C-207ENST00000484378 MED1Q15648 1581 aaPredicted RBP42.94■■■■■ 4.46
HLA-C-207ENST00000484378 RBM33Q96EV2 1170 aaKnown RBP42.93■■■■■ 4.46
HLA-C-207ENST00000484378 CHD2O14647 1828 aaKnown RBP42.92■■■■■ 4.46
HLA-C-207ENST00000484378 HFM1A2PYH4 1435 aa42.9■■■■■ 4.46
HLA-C-207ENST00000484378 TBX22Q9Y458 520 aa42.9■■■■■ 4.46
HLA-C-207ENST00000484378 DIP2AQ14689 1571 aa42.9■■■■■ 4.46
HLA-C-207ENST00000484378 ADAMTS13Q76LX8 1427 aa42.88■■■■■ 4.45
HLA-C-207ENST00000484378 TRPM2O94759 1503 aa42.83■■■■■ 4.45
HLA-C-207ENST00000484378 MSH6P52701 1360 aa42.83■■■■■ 4.45
HLA-C-207ENST00000484378 CLTCL1P53675 1640 aa42.81■■■■■ 4.44
HLA-C-207ENST00000484378 FAM135BQ49AJ0 1406 aa42.8■■■■■ 4.44
HLA-C-207ENST00000484378 TRIM52Q96A61 297 aa42.79■■■■■ 4.44
HLA-C-207ENST00000484378 ZNF326Q5BKZ1 582 aaKnown RBP42.78■■■■■ 4.44
HLA-C-207ENST00000484378 PIK3R4Q99570 1358 aa42.78■■■■■ 4.44
HLA-C-207ENST00000484378 ROBO1Q9Y6N7 1651 aa42.75■■■■■ 4.43
HLA-C-207ENST00000484378 SOCS7O14512 581 aa42.73■■■■■ 4.43
HLA-C-207ENST00000484378 SETBP1Q9Y6X0 1596 aa42.7■■■■■ 4.43
HLA-C-207ENST00000484378 NRXN3Q9Y4C0 1643 aa42.69■■■■■ 4.42
HLA-C-207ENST00000484378 KIF1BO60333 1816 aa42.69■■■■■ 4.42
HLA-C-207ENST00000484378 NCOA3Q9Y6Q9 1424 aa42.68■■■■■ 4.42
HLA-C-207ENST00000484378 C14orf37Q86TY3 774 aa42.67■■■■■ 4.42
HLA-C-207ENST00000484378 SLC4A1APQ9BWU0 796 aaKnown RBP42.66■■■■■ 4.42
HLA-C-207ENST00000484378 NEXMIFQ5QGS0 1516 aa42.66■■■■■ 4.42
HLA-C-207ENST00000484378 PHF23Q9BUL5 403 aaPredicted RBP42.65■■■■■ 4.42
HLA-C-207ENST00000484378 PTPRUQ92729 1446 aa42.63■■■■■ 4.41
HLA-C-207ENST00000484378 SLAIN2Q9P270 581 aa42.62■■■■■ 4.41
HLA-C-207ENST00000484378 AMOTL2Q9Y2J4 779 aa42.62■■■■■ 4.41
HLA-C-207ENST00000484378 XRN1Q8IZH2 1706 aaKnown RBP42.57■■■■■ 4.4
HLA-C-207ENST00000484378 SIPA1L2Q9P2F8 1722 aaPredicted RBP42.55■■■■■ 4.4
HLA-C-207ENST00000484378 C19orf44Q9H6X5 657 aa42.52■■■■■ 4.4
HLA-C-207ENST00000484378 METP08581 1390 aa42.51■■■■■ 4.4
HLA-C-207ENST00000484378 PHLPP1O60346 1717 aa42.5■■■■■ 4.39
HLA-C-207ENST00000484378 CADPS2Q86UW7 1296 aa42.5■■■■■ 4.39
HLA-C-207ENST00000484378 ATF3P18847 181 aa42.49■■■■■ 4.39
HLA-C-207ENST00000484378 FOXD1Q16676 465 aa42.44■■■■■ 4.38
HLA-C-207ENST00000484378 VGFO15240 615 aaPredicted RBP42.42■■■■■ 4.38
HLA-C-207ENST00000484378 DCCP43146 1447 aa42.4■■■■■ 4.38
HLA-C-207ENST00000484378 RPGRIP1LQ68CZ1 1315 aa42.4■■■■■ 4.38
HLA-C-207ENST00000484378 PPLO60437 1756 aa42.37■■■■■ 4.37
HLA-C-207ENST00000484378 COL16A1Q07092 1604 aaPredicted RBP42.36■■■■■ 4.37
HLA-C-207ENST00000484378 CCDC144AA2RUR9 1427 aa42.36■■■■■ 4.37
HLA-C-207ENST00000484378 MPHOSPH9Q99550 1183 aa42.34■■■■■ 4.37
HLA-C-207ENST00000484378 SETD1AO15047 1707 aaKnown RBP42.34■■■■■ 4.37
HLA-C-207ENST00000484378 JCADQ9P266 1359 aa42.33■■■■■ 4.37
HLA-C-207ENST00000484378 AHDC1Q5TGY3 1603 aaPredicted RBP42.31■■■■■ 4.36
HLA-C-207ENST00000484378 ADGRL3Q9HAR2 1447 aa42.29■■■■■ 4.36
HLA-C-207ENST00000484378 NALCNQ8IZF0 1738 aa42.27■■■■■ 4.36
HLA-C-207ENST00000484378 SETD5Q9C0A6 1442 aa42.27■■■■■ 4.36
HLA-C-207ENST00000484378 BRINP3Q76B58 766 aa42.25■■■■■ 4.35
HLA-C-207ENST00000484378 RGS17Q9UGC6 210 aaPredicted RBP42.25■■■■■ 4.35
HLA-C-207ENST00000484378 PTCH1Q13635 1447 aa42.25■■■■■ 4.35
HLA-C-207ENST00000484378 ACIN1Q9UKV3 1341 aaKnown RBP42.24■■■■■ 4.35
HLA-C-207ENST00000484378 MST1RQ04912 1400 aa42.24■■■■■ 4.35
HLA-C-207ENST00000484378 ASXL1Q8IXJ9 1541 aa42.21■■■■■ 4.35
HLA-C-207ENST00000484378 SPATA31E1Q6ZUB1 1445 aa42.2■■■■■ 4.35
HLA-C-207ENST00000484378 RGL3Q3MIN7 710 aa42.19■■■■■ 4.34
HLA-C-207ENST00000484378 ROBO2Q9HCK4 1378 aa42.17■■■■■ 4.34
HLA-C-207ENST00000484378 PRAG1Q86YV5 1406 aa42.17■■■■■ 4.34
HLA-C-207ENST00000484378 IFT172Q9UG01 1749 aa42.15■■■■■ 4.34
HLA-C-207ENST00000484378 SHPRHQ149N8 1683 aa42.13■■■■■ 4.34
HLA-C-207ENST00000484378 ADGRF5Q8IZF2 1346 aa42.13■■■■■ 4.33
HLA-C-207ENST00000484378 ANKRD30BQ9BXX2 1392 aa42.13■■■■■ 4.33
HLA-C-207ENST00000484378 SPATA31A6Q5VVP1 1343 aa42.12■■■■■ 4.33
HLA-C-207ENST00000484378 RAB3GAP2Q9H2M9 1393 aa42.12■■■■■ 4.33
HLA-C-207ENST00000484378 NHSL1Q5SYE7 1610 aa42.1■■■■■ 4.33
HLA-C-207ENST00000484378 LRP6O75581 1613 aa42.06■■■■■ 4.32
HLA-C-207ENST00000484378 POTEAQ6S8J7 498 aa42.04■■■■■ 4.32
HLA-C-207ENST00000484378 C1orf167Q5SNV9 1468 aa42.03■■■■■ 4.32
HLA-C-207ENST00000484378 MEX3CQ5U5Q3 659 aaKnown RBP42.01■■■■■ 4.32
HLA-C-207ENST00000484378 PIK3C2GO75747 1445 aa42■■■■■ 4.31
HLA-C-207ENST00000484378 DDX17Q92841 729 aaKnown RBP41.95■■■■■ 4.31
HLA-C-207ENST00000484378 STK26Q9P289 416 aa41.94■■■■■ 4.3
HLA-C-207ENST00000484378 TECPR2O15040 1411 aa41.94■■■■■ 4.3
HLA-C-207ENST00000484378 LRPPRCP42704 1394 aaKnown RBP41.93■■■■■ 4.3
HLA-C-207ENST00000484378 LRRC59Q96AG4 307 aaKnown RBP41.93■■■■■ 4.3
HLA-C-207ENST00000484378 CDC42BPGQ6DT37 1551 aa41.93■■■■■ 4.3
HLA-C-207ENST00000484378 KNDC1Q76NI1 1749 aa41.91■■■■■ 4.3
HLA-C-207ENST00000484378 NUTM2BA6NNL0 878 aaPredicted RBP41.9■■■■■ 4.3
HLA-C-207ENST00000484378 NUTM2EB1AL46 878 aaPredicted RBP41.9■■■■■ 4.3
HLA-C-207ENST00000484378 NUTM2AQ8IVF1 878 aaPredicted RBP41.9■■■■■ 4.3
HLA-C-207ENST00000484378 TMEM132EQ6IEE7 984 aa41.89■■■■■ 4.3
HLA-C-207ENST00000484378 MYOM2P54296 1465 aa41.88■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms