RNA–Protein interactions for RNA: ENST00000484313.3

ZEB2-222, Transcript of zinc finger E-box binding homeobox 2, human

TSL 1 (best)

Gene ZEB2, Length 845 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-222	ENST00000484313	PRDM15	P57071	1507 aa	Predicted RBP	13.38	□□□□□ -0.27
ZEB2-222	ENST00000484313	UBR1	Q8IWV7	1749 aa		13.37	□□□□□ -0.27
ZEB2-222	ENST00000484313	SYNM	O15061	1565 aa		13.37	□□□□□ -0.27
ZEB2-222	ENST00000484313	UGGT1	Q9NYU2	1555 aa		13.37	□□□□□ -0.27
ZEB2-222	ENST00000484313	SHANK2	Q9UPX8	1470 aa		13.36	□□□□□ -0.27
ZEB2-222	ENST00000484313	MIA2	Q96PC5	1412 aa		13.36	□□□□□ -0.27
ZEB2-222	ENST00000484313	ERVK-7	P63135	1459 aa		13.36	□□□□□ -0.27
ZEB2-222	ENST00000484313	RSPH4A	Q5TD94	716 aa		13.35	□□□□□ -0.27
ZEB2-222	ENST00000484313	MYOM3	Q5VTT5	1437 aa		13.34	□□□□□ -0.27
ZEB2-222	ENST00000484313	KIF3B	O15066	747 aa		13.34	□□□□□ -0.27
ZEB2-222	ENST00000484313	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.34	□□□□□ -0.27
ZEB2-222	ENST00000484313	SOCS7	O14512	581 aa		13.33	□□□□□ -0.28
ZEB2-222	ENST00000484313	CHGA	P10645	457 aa	Known RBP	13.33	□□□□□ -0.28
ZEB2-222	ENST00000484313	MED1	Q15648	1581 aa	Predicted RBP	13.32	□□□□□ -0.28
ZEB2-222	ENST00000484313	DUOX2	Q9NRD8	1548 aa		13.32	□□□□□ -0.28
ZEB2-222	ENST00000484313	NPHP4	O75161	1426 aa	Predicted RBP	13.31	□□□□□ -0.28
ZEB2-222	ENST00000484313	ARHGAP23	Q9P227	1491 aa		13.31	□□□□□ -0.28
ZEB2-222	ENST00000484313	XIRP1	Q702N8	1843 aa	Known RBP	13.31	□□□□□ -0.28
ZEB2-222	ENST00000484313	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	2e-6	■□□□□ 10.3
ZEB2-222	ENST00000484313	KDM5A	P29375	1690 aa	Known RBP	13.31	□□□□□ -0.28
ZEB2-222	ENST00000484313	SLIT1	O75093	1534 aa		13.3	□□□□□ -0.28
ZEB2-222	ENST00000484313	UBAP1L	F5GYI3	381 aa		13.29	□□□□□ -0.28
ZEB2-222	ENST00000484313	TAOK2	Q9UL54	1235 aa		13.29	□□□□□ -0.28
ZEB2-222	ENST00000484313	ARHGAP31	Q2M1Z3	1444 aa		13.29	□□□□□ -0.28
ZEB2-222	ENST00000484313	PTPN23	Q9H3S7	1636 aa		13.28	□□□□□ -0.28
ZEB2-222	ENST00000484313	WASHC2C	Q9Y4E1	1318 aa		13.28	□□□□□ -0.28
ZEB2-222	ENST00000484313	LRRC7	Q96NW7	1537 aa		13.28	□□□□□ -0.28
ZEB2-222	ENST00000484313	TSHZ2	Q9NRE2	1034 aa		13.27	□□□□□ -0.29
ZEB2-222	ENST00000484313	ERBIN	Q96RT1	1412 aa		13.27	□□□□□ -0.29
ZEB2-222	ENST00000484313	LMTK2	Q8IWU2	1503 aa		13.27	□□□□□ -0.29
ZEB2-222	ENST00000484313	CFAP65	Q6ZU64	1925 aa	Known RBP	13.27	□□□□□ -0.29
ZEB2-222	ENST00000484313	PIK3C2B	O00750	1634 aa		13.26	□□□□□ -0.29
ZEB2-222	ENST00000484313	ABCC5	O15440	1437 aa		13.26	□□□□□ -0.29
ZEB2-222	ENST00000484313	PRKCSH	P14314	528 aa	Predicted RBP	13.26	□□□□□ -0.29
ZEB2-222	ENST00000484313	KANK4	Q5T7N3	995 aa	Predicted RBP	13.26	□□□□□ -0.29
ZEB2-222	ENST00000484313	GSE1	Q14687	1217 aa		13.25	□□□□□ -0.29
ZEB2-222	ENST00000484313	SCAF11	Q99590	1463 aa	Known RBP	13.24	□□□□□ -0.29
ZEB2-222	ENST00000484313	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.24	□□□□□ -0.29
ZEB2-222	ENST00000484313	TSPY4	P0CV99	314 aa		13.23	□□□□□ -0.29
ZEB2-222	ENST00000484313	TSPY10	P0CW01	314 aa		13.23	□□□□□ -0.29
ZEB2-222	ENST00000484313	ANKLE2	Q86XL3	938 aa		13.23	□□□□□ -0.29
ZEB2-222	ENST00000484313	DAPK1	P53355	1430 aa		13.22	□□□□□ -0.29
ZEB2-222	ENST00000484313	KIF15	Q9NS87	1388 aa		13.22	□□□□□ -0.29
ZEB2-222	ENST00000484313	EFCAB6	Q5THR3	1501 aa		13.22	□□□□□ -0.29
ZEB2-222	ENST00000484313	HSPA1L	P34931	641 aa		13.21	□□□□□ -0.29
ZEB2-222	ENST00000484313	NUBP1	P53384	320 aa		13.21	□□□□□ -0.29
ZEB2-222	ENST00000484313	HS6ST3	Q8IZP7	471 aa		13.21	□□□□□ -0.29
ZEB2-222	ENST00000484313	FGD6	Q6ZV73	1430 aa		13.21	□□□□□ -0.3
ZEB2-222	ENST00000484313	ADGRL2	O95490	1459 aa		13.2	□□□□□ -0.3
ZEB2-222	ENST00000484313	NWD1	Q149M9	1564 aa		13.2	□□□□□ -0.3
ZEB2-222	ENST00000484313	TET3	O43151	1660 aa		13.19	□□□□□ -0.3
ZEB2-222	ENST00000484313	ADGRB3	O60242	1522 aa		13.18	□□□□□ -0.3
ZEB2-222	ENST00000484313	NOS1	P29475	1434 aa		13.17	□□□□□ -0.3
ZEB2-222	ENST00000484313	LOC105371045	A0A1W2PR82	267 aa		13.17	□□□□□ -0.3
ZEB2-222	ENST00000484313	TOM1	O60784	492 aa		13.17	□□□□□ -0.3
ZEB2-222	ENST00000484313	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.17	□□□□□ -0.3
ZEB2-222	ENST00000484313	RNF25	Q96BH1	459 aa	Predicted RBP	13.17	□□□□□ -0.3
ZEB2-222	ENST00000484313	MYO5B	Q9ULV0	1848 aa		13.16	□□□□□ -0.3
ZEB2-222	ENST00000484313	LTK	P29376	864 aa		13.15	□□□□□ -0.3
ZEB2-222	ENST00000484313	TMEM2	Q9UHN6	1383 aa		13.15	□□□□□ -0.3
ZEB2-222	ENST00000484313	DCAF8	Q5TAQ9	597 aa		13.14	□□□□□ -0.31
ZEB2-222	ENST00000484313	UNC13B	O14795	1591 aa		13.14	□□□□□ -0.31
ZEB2-222	ENST00000484313	GCC2	Q8IWJ2	1684 aa		13.13	□□□□□ -0.31
ZEB2-222	ENST00000484313	PIP4K2B	P78356	416 aa		13.13	□□□□□ -0.31
ZEB2-222	ENST00000484313	AKT1S1	Q96B36	256 aa		13.13	□□□□□ -0.31
ZEB2-222	ENST00000484313	NKTR	P30414	1462 aa	Known RBP	13.11	□□□□□ -0.31
ZEB2-222	ENST00000484313	RPRD2	Q5VT52	1461 aa	Known RBP	13.11	□□□□□ -0.31
ZEB2-222	ENST00000484313	TMEM131L	A2VDJ0	1609 aa		13.1	□□□□□ -0.31
ZEB2-222	ENST00000484313	ZFYVE9	O95405	1425 aa		13.1	□□□□□ -0.31
ZEB2-222	ENST00000484313	ANKRD30A	Q9BXX3	1397 aa		13.09	□□□□□ -0.31
ZEB2-222	ENST00000484313	ROBO1	Q9Y6N7	1651 aa		13.09	□□□□□ -0.31
ZEB2-222	ENST00000484313	CHD2	O14647	1828 aa	Known RBP	13.09	□□□□□ -0.31
ZEB2-222	ENST00000484313	RBM42	Q9BTD8	480 aa	Known RBP	13.09	□□□□□ -0.31
ZEB2-222	ENST00000484313	CREBZF	Q9NS37	354 aa		13.09	□□□□□ -0.31
ZEB2-222	ENST00000484313	FAM135B	Q49AJ0	1406 aa		13.08	□□□□□ -0.32
ZEB2-222	ENST00000484313	RIOK3	O14730	519 aa	Known RBP	13.08	□□□□□ -0.32
ZEB2-222	ENST00000484313	TPRN	Q4KMQ1	711 aa		13.08	□□□□□ -0.32
ZEB2-222	ENST00000484313	RRP7BP	Q9NSQ0	103 aa		13.08	□□□□□ -0.32
ZEB2-222	ENST00000484313		E9PCH4	1651 aa		13.08	□□□□□ -0.32
ZEB2-222	ENST00000484313	PRR29	P0C7W0	189 aa		13.07	□□□□□ -0.32
ZEB2-222	ENST00000484313	TXNDC2	Q86VQ3	553 aa		13.07	□□□□□ -0.32
ZEB2-222	ENST00000484313	KANK1	Q14678	1352 aa		13.07	□□□□□ -0.32
ZEB2-222	ENST00000484313	IQGAP3	Q86VI3	1631 aa		13.06	□□□□□ -0.32
ZEB2-222	ENST00000484313	MNX1	P50219	401 aa	Predicted RBP	13.06	□□□□□ -0.32
ZEB2-222	ENST00000484313	CLEC11A	Q9Y240	323 aa		13.06	□□□□□ -0.32
ZEB2-222	ENST00000484313	IDI1	Q13907	227 aa		13.05	□□□□□ -0.32
ZEB2-222	ENST00000484313	TMEM94	Q12767	1356 aa		13.05	□□□□□ -0.32
ZEB2-222	ENST00000484313	ANKRD50	Q9ULJ7	1429 aa		13.05	□□□□□ -0.32
ZEB2-222	ENST00000484313	FAM212A	Q96EL1	285 aa		13.04	□□□□□ -0.32
ZEB2-222	ENST00000484313	CHRM1	P11229	460 aa	Predicted RBP	13.03	□□□□□ -0.32
ZEB2-222	ENST00000484313	NKX1-1	Q15270	411 aa	Predicted RBP	13.03	□□□□□ -0.32
ZEB2-222	ENST00000484313	DIP2A	Q14689	1571 aa		13.03	□□□□□ -0.32
ZEB2-222	ENST00000484313	COL16A1	Q07092	1604 aa	Predicted RBP	13.02	□□□□□ -0.32
ZEB2-222	ENST00000484313	RGS17	Q9UGC6	210 aa	Predicted RBP	13.02	□□□□□ -0.33
ZEB2-222	ENST00000484313	KCNA6	P17658	529 aa		13.01	□□□□□ -0.33
ZEB2-222	ENST00000484313	EID1	Q9Y6B2	187 aa		13.01	□□□□□ -0.33
ZEB2-222	ENST00000484313	PLEKHG1	Q9ULL1	1385 aa		13.01	□□□□□ -0.33
ZEB2-222	ENST00000484313	NRXN3	Q9Y4C0	1643 aa		13.01	□□□□□ -0.33
ZEB2-222	ENST00000484313	REM2	Q8IYK8	340 aa	Predicted RBP	13	□□□□□ -0.33
ZEB2-222	ENST00000484313	PHLPP1	O60346	1717 aa		12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms